Factsheet for Os06t0604400-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
extracellular 2
cytosol 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 1
golgi 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	extracellular
MultiLoc:	cytosol
Plant-mPloc:	endoplasmic reticulum, vacuole
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d046508_P001	Maize	cytosol, mitochondrion, plasma membrane	85.68	85.78
EER88618	Sorghum	cytosol	85.43	85.54
HORVU7Hr1G089960.3	Barley	cytosol	82.74	82.44
TraesCS7D01G372800.1	Wheat	cytosol	82.74	82.44
TraesCS7A01G376500.3	Wheat	cytosol	82.62	82.32
TraesCS4B01G377600.1	Wheat	cytosol	81.27	80.88
TraesCSU01G145400.1	Wheat	cytosol	81.15	80.76
TraesCS7B01G277900.1	Wheat	plastid	82.62	79.32
HORVU0Hr1G009480.5	Barley	extracellular, peroxisome	61.2	76.45
GSMUA_Achr10P...	Banana	cytosol, nucleus, peroxisome	15.67	73.99
Os06t0604200-02	Rice	cytosol, plasma membrane	73.81	72.48
Os06t0604300-01	Rice	plasma membrane	74.42	72.21
Os01t0172400-03	Rice	plastid	71.24	71.67
GSMUA_Achr10P...	Banana	cytosol	26.44	70.82
Os05t0171000-01	Rice	plasma membrane	68.05	67.48
Os03t0391400-01	Rice	plasma membrane	32.31	60.27
Os08t0401800-00	Rice	plasma membrane	48.84	49.57
Os09t0421300-01	Rice	cytosol	49.2	49.2
Os03t0119100-01	Rice	plasma membrane	46.76	45.75
Os07t0260400-01	Rice	cytosol, plasma membrane	44.55	43.44
Os09t0543100-02	Rice	plasma membrane	44.8	42.86
GSMUA_Achr6P35870_001	Banana	plasma membrane	46.02	39.54
Os10t0524400-01	Rice	plasma membrane	45.9	35.85
Os03t0840800-01	Rice	cytosol	14.93	34.37
Os02t0120200-01	Rice	extracellular	20.07	18.02
Os05t0358700-01	Rice	cytosol, plasma membrane	1.71	8.05

Protein Annotations

KEGG:00564+3.1.4.4	KEGG:00565+3.1.4.4	Gene3D:2.60.40.150	Gene3D:3.30.870.10	EntrezGene:4341469	MapMan:5.7.2.4.1
EMBL:AK072121	ProteinID:BAA19466.1	ProteinID:BAD35531.1	ProteinID:BAF19931.1	ProteinID:BAS98517.1	InterPro:C2_dom
InterPro:C2_domain_sf	ProteinID:EEE65982.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004630	GO:GO:0005488
GO:GO:0005509	GO:GO:0005575	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009987	GO:GO:0016020	GO:GO:0016042	GO:GO:0016787	GO:GO:0046470	GO:GO:0070290
InterPro:IPR000008	InterPro:IPR001736	InterPro:IPR035892	EnsemblPlantsGene:Os06g0604400	EnsemblPlants:Os06t0604400-01	UniProt:P93844
PFAM:PF00168	PFAM:PF00614	PFAM:PF12357	PIRSF:PIRSF036470	InterPro:PLipase_D/transphosphatidylase	InterPro:PLipase_D_C
InterPro:PLipase_D_fam	InterPro:PLipase_D_pln	PFscan:PS50035	PANTHER:PTHR18896	PANTHER:PTHR18896:SF59	SMART:SM00155
SMART:SM00239	SUPFAM:SSF49562	SUPFAM:SSF56024	UniParc:UPI0000403813	RefSeq:XP_015643893.1	SEG:seg

Description

PHOSPHOLIPASE D ALPHA 3Similar to Phospholipase D. (Os06t0604400-01)

Coordinates

chr6:+:23928713..23932370

Molecular Weight (calculated)

91324.0 Da

IEP (calculated)

7.037

GRAVY (calculated)

-0.287

Length

817 amino acids

Sequence
(BLAST)

001: MAHLLLHGTL EATILEADHL SNPTRATGAA PGIFRKFVEG FEDSLGLGKG ATRLYATIDL GRARVGRTRV VDDEPVNPRW YEVFHIYCAH FAADVVFSVK
101: AAQPIGATLI GRAYLPVREL LSGEAIERRL DILDAGRRRI SHGPTIHVRL QFRDVAGDRH GWGRGVSGAR YPGVPYTFFS QRPGCRVTLY QDAHVPDAFA
201: PRIPLAGGGY YRQGRCWEDV FDAISNAKHL IYLTGWSVYT EITLIRDGTR QRPGGDATLG ELLKRKASEG VRVLLLVWDD RTSVESLGMK WGFMSTHDAE
301: TADYFRGTDV RCVLCPRNPD AGRSAIMGAQ IAYMITHHQK TVIVDHDMPV PRGGGSRRIV SFVGGLDLCD GRYDTQFHSL FRTLDTAHHS DFHQPNLDGA
401: AVTKGGPREP WHDIHSKIEG PAAWDVLYNF EQRWRKQGGD KDLLLDLKAM ADLIIPPSPV MFPDDGEAWS VQLFRSIDGG ACFGFPSTPE AAARSGLVSG
501: KNNTIDRSIQ DAYIHAIRRA KNFIYIENQY FLGSSFAWKA DGIRPEDIEA LHLIPREISL KIVNKIEAGE RFAVYVVLPM WPEGPPASGS VQAILDWQRR
601: TMEMMYYDIA VALEAKRINA DPRDYLTFFC LGNREVKLNG EYEPAGRPLD GTDYAKAQKA RRFMIYVHSK MMIVDDEYII VGSANINQRS MDGGRDSEIA
701: MGAFQPCHLN TKGLVARGQI HGFRMSLWYE HLGMLHDNFL NPESLECVQR VNKMADKYWD LYASDELNDD LPGHLLTYPV RVTKEGTVTE LPGAKFFPDT
801: QAPVIGTKGN LPPFLTT

Best Arabidopsis Sequence Match ( AT3G15730.1 )
(BLAST)

001: MAQHLLHGTL HATIYEVDAL HGGGVRQGFL GKILANVEET IGVGKGETQL YATIDLQKAR VGRTRKIKNE PKNPKWYESF HIYCAHLASD IIFTVKDDNP
101: IGATLIGRAY IPVDQVINGE EVDQWVEILD NDRNPIQGGS KIHVKLQYFH VEEDRNWNMG IKSAKFPGVP YTFFSQRQGC KVSLYQDAHI PDNFVPRIPL
201: AGGKNYEPQR CWEDIFDAIS NAKHLIYITG WSVYAEIALV RDSRRPKPGG DVTIGELLKK KASEGVRVLL LVWDDRTSVD VLKKDGLMAT HDEETENFFR
301: GSDVHCILCP RNPDDGGSIV QSLQISTMFT HHQKIVVVDS EMPSRGGSEM RRIVSFVGGI DLCDGRYDTP FHSLFRTLDT VHHDDFHQPN FTGAAITKGG
401: PREPWHDIHS RLEGPIAWDV MYNFEQRWSK QGGKDILVKL RDLSDIIITP SPVMFQEDHD VWNVQLFRSI DGGAAAGFPE SPEAAAEAGL VSGKDNIIDR
501: SIQDAYIHAI RRAKDFIYVE NQYFLGSSFA WAADGITPED INALHLIPKE LSLKIVSKIE KGEKFRVYVV VPMWPEGLPE SGSVQAILDW QRRTMEMMYK
601: DVIQALRAQG LEEDPRNYLT FFCLGNREVK KDGEYEPAEK PDPDTDYMRA QEARRFMIYV HTKMMIVDDE YIIIGSANIN QRSMDGARDS EIAMGGYQPH
701: HLSHRQPARG QIHGFRMSLW YEHLGMLDET FLDPSSLECI EKVNRISDKY WDFYSSESLE HDLPGHLLRY PIGVASEGDI TELPGFEFFP DTKARILGTK
801: SDYLPPILTT

Arabidopsis Description

PLDALPHA1Phospholipase D alpha 1 [Source:UniProtKB/Swiss-Prot;Acc:Q38882]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.