Factsheet for Os09t0543100-02

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
vacuole 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

plasma membrane: 18260611
plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 18260611 doi

SH Natera, KL Ford, AM Cassin, JH Patterson, EJ Newbigin, A Bacic

Plant Cell Biology Research Centre, VIC, Australia. s.natera@unimelb.edu.au

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d006262_P001	Maize	cytoskeleton, cytosol, peroxisome	15.57	86.36
KXG36094	Sorghum	cytosol	86.53	86.03
Zm00001d006257_P009	Maize	cytosol	85.25	85.05
TraesCS5A01G337100.2	Wheat	cytosol	83.72	82.95
TraesCS5D01G341800.2	Wheat	cytosol	79.86	82.37
TraesCS5B01G336100.1	Wheat	cytosol	83.14	82.37
Zm00001d022594_P002	Maize	cytosol	83.61	80.68
HORVU5Hr1G084740.4	Barley	plastid	67.33	80.42
GSMUA_AchrUn_...	Banana	cytosol	74.12	73.78
GSMUA_Achr1P07360_001	Banana	cytosol	62.76	73.22
GSMUA_Achr9P21120_001	Banana	nucleus	21.08	71.43
GSMUA_Achr1P14920_001	Banana	plastid	66.39	71.41
PGSC0003DMT400025590	Potato	cytosol	66.74	70.28
Solyc04g082000.2.1	Tomato	cytosol	68.62	69.85
KRH60977	Soybean	cytosol	67.68	68.24
KRH51648	Soybean	cytosol	66.86	67.41
VIT_00s0264g00100.t01	Wine grape	cytosol	68.15	66.67
VIT_18s0001g00770.t01	Wine grape	nucleus	68.27	66.63
PGSC0003DMT400009253	Potato	cytosol	20.26	66.28
KRH28860	Soybean	mitochondrion	66.63	65.7
KRH76589	Soybean	extracellular	66.39	65.62
Bra034939.1-P	Field mustard	cytosol	63.82	65.43
Solyc02g083340.2.1	Tomato	nucleus	65.57	64.67
Solyc02g061850.2.1	Tomato	cytosol	63.82	64.12
AT4G35790.1	Thale cress	cytosol	64.75	63.71
CDX72557	Canola	cytosol	64.29	63.47
Bra017730.1-P	Field mustard	cytosol	62.3	63.41
PGSC0003DMT400009250	Potato	cytosol	40.98	63.29
CDY47037	Canola	cytosol	64.99	62.71
CDY35793	Canola	cytosol	63.35	62.54
KRH37270	Soybean	cytosol	19.09	61.98
Bra010512.1-P	Field mustard	cytosol	58.2	61.59
CDY67335	Canola	cytosol	62.06	61.2
Os07t0260400-01	Rice	cytosol, plasma membrane	59.72	60.86
CDY41630	Canola	cytosol	61.36	60.44
CDX80734	Canola	cytosol	7.49	52.89
Os03t0119100-01	Rice	plasma membrane	51.41	52.57
Os03t0391400-01	Rice	plasma membrane	25.64	50.0
Os03t0840800-01	Rice	cytosol	20.61	49.58
Os01t0172400-03	Rice	plastid	44.96	47.29
Os05t0171000-01	Rice	plasma membrane	44.26	45.87
Os06t0604400-01	Rice	plasma membrane	42.86	44.8
Os06t0604300-01	Rice	plasma membrane	43.09	43.71
Os06t0604200-02	Rice	cytosol, plasma membrane	42.15	43.27
Os10t0524400-01	Rice	plasma membrane	52.81	43.12
Os09t0421300-01	Rice	cytosol	41.22	43.08
CDY42882	Canola	nucleus	14.87	39.44
Os08t0401800-00	Rice	plasma membrane	36.18	38.39
Os02t0120200-01	Rice	extracellular	26.35	24.73
Os05t0358700-01	Rice	cytosol, plasma membrane	1.87	9.2

Protein Annotations

KEGG:00564+3.1.4.4	KEGG:00565+3.1.4.4	Gene3D:2.60.40.150	Gene3D:3.30.870.10	MapMan:5.7.2.4.3	EMBL:AK100579
ProteinID:BAF25740.1	ProteinID:BAT09220.1	InterPro:C2_dom	InterPro:C2_domain_sf	ncoils:Coil	GO:GO:0003674
GO:GO:0003824	GO:GO:0004630	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575	GO:GO:0006629
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016020	GO:GO:0016042
GO:GO:0016787	GO:GO:0046470	GO:GO:0070290	InterPro:IPR000008	InterPro:IPR001736	InterPro:IPR035892
EnsemblPlantsGene:Os09g0543100	EnsemblPlants:Os09t0543100-02	PFAM:PF00168	PFAM:PF00614	PFAM:PF12357	PIRSF:PIRSF036470
InterPro:PLipase_D/transphosphatidylase	InterPro:PLipase_D_C	InterPro:PLipase_D_fam	InterPro:PLipase_D_pln	PFscan:PS50004	PFscan:PS50035
PANTHER:PTHR18896	PANTHER:PTHR18896:SF86	UniProt:Q0IZX5	SMART:SM00155	SMART:SM00239	SUPFAM:SSF49562
SUPFAM:SSF56024	UniParc:UPI0000DD9854	SEG:seg	:	:	:

Description

PHOSPHOLIPASE D delta 1Similar to predicted protein. (Os09t0543100-01);Similar to Phospholipase D nu-2 (Fragment). (Os09t0543100-02);Similar to predicted protein. (Os09t0543100-03)

Coordinates

chr9:+:21391854..21397921

Molecular Weight (calculated)

96465.7 Da

IEP (calculated)

7.203

GRAVY (calculated)

-0.427

Length

854 amino acids

Sequence
(BLAST)

001: MESSAGGGGG ESPPPAKPVL LHGDLDLWVV EARLLPNMDM FSEHVRRCFA ACKPPTSCAT ARQPRHARGH HRRKIITSDP YVTLSVAGAV VARTRVIPND
101: QDPVWDERFA VPLAHYAAAL EFHVKDNDTF GAQLIGTVTI PADRVASCQE VEDWFPIIGN NGRPYKPDTA LRLRLRFNPA ADNPLYRRGI PGDPDHQGIK
201: DSYFPLRHGG RVTLYQDAHY REGDLPEIEL DEGGKVFDHN ACWEDICHAI LEAHHMIYIV GWSVYDKVRL VREPSPSRPL PEGGDLNLGE LLKFKSQEGV
301: RVCLLVWDDK TSHDKLFIKT GGVMATHDEE TRKFFKHSSV ICVLSPRYAS SKLSIFKQQV VGTLFTHHQK CVLVDTQAWG NKRKITAFIG GLDLCDGRYD
401: TPEHRLFKDL DTVFDNDYHN PTFPSGAKGG PRQPWHDLHC RIDGPAAYDV LKNFEQRWRK ATKWRERFRK VSHWKDDALI KLERISWILS PSPTIPNDDI
501: SLRVSKEEDP ENWHVQVFRS IDSGSLKGFP SDCKEASKQN LICRKDLIID KSIHTAYVRA IRSAQHFIYI ENQYFLGSSY AWPSYVNSGA DNLVPIELAL
601: KIASKIRAGE RFAVYVVIPM WPEGVPTAAS VQEILFFQTM EMMYRIIAQE LKAMNIKNAH PQDYLNFYCL GNREESSSSN GSPESNDKSA AALARKYRRF
701: MIYVHAKGMI VDDEYVILGS ANINQRSLAG SRDTEIAMGA YQPHHTWSTK GGHPRGQVYG YRTSLWAEHL GMVDDLFKDP SSLECVNYVN EIAEENWRRF
801: TAEQLITLQG HLLKYPVKVE ADGKVGPLPE HECFPDVGGK ILGAPTSLPD TLTM

Best Arabidopsis Sequence Match ( AT4G35790.2 )
(BLAST)

001: MAEKVSEDVM LLHGDLDLKI VKARRLPNMD MFSEHLRRLF TACNACARPT DTDDVDPRDK GEFGDKNIRS HRKVITSDPY VTVVVPQATL ARTRVLKNSQ
101: EPLWDEKFNI SIAHPFAYLE FQVKDDDVFG AQIIGTAKIP VRDIASGERI SGWFPVLGAS GKPPKAETAI FIDMKFTPFD QIHSYRCGIA GDPERRGVRR
201: TYFPVRKGSQ VRLYQDAHVM DGTLPAIGLD NGKVYEHGKC WEDICYAISE AHHMIYIVGW SIFHKIKLVR ETKVPRDKDM TLGELLKYKS QEGVRVLLLV
301: WDDKTSHDKF GIKTPGVMGT HDEETRKFFK HSSVICVLSP RYASSKLGLF KQQVVGTLFT HHQKCVLVDT QAVGNNRKVT AFIGGLDLCD GRYDTPEHRI
401: LHDLDTVFKD DFHNPTFPAG TKAPRQPWHD LHCRIDGPAA YDVLINFEQR WRKATRWKEF SLRLKGKTHW QDDALIRIGR ISWILSPVFK FLKDGTSIIP
501: EDDPCVWVSK EDDPENWHVQ IFRSIDSGSV KGFPKYEDEA EAQHLECAKR LVVDKSIQTA YIQTIRSAQH FIYIENQYFL GSSYAWPSYR DAGADNLIPM
601: ELALKIVSKI RAKERFAVYV VIPLWPEGDP KSGPVQEILY WQSQTMQMMY DVIAKELKAV QSDAHPLDYL NFYCLGKREQ LPDDMPATNG SVVSDSYNFQ
701: RFMIYVHAKG MIVDDEYVLM GSANINQRSM AGTKDTEIAM GAYQPNHTWA HKGRHPRGQV YGYRMSLWAE HLGKTGDEFV EPSDLECLKK VNTISEENWK
801: RFIDPKFSEL QGHLIKYPLQ VDVDGKVSPL PDYETFPDVG GKIIGAHSMA LPDTLTT

Arabidopsis Description

PLDDELTAPhospholipase D delta [Source:UniProtKB/Swiss-Prot;Acc:Q9C5Y0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.