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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra034939.1-P Field mustard cytosol 95.03 98.68
GSMUA_Achr1P07360_001 Banana cytosol 56.53 66.8
GSMUA_AchrUn_... Banana cytosol 64.86 65.38
Zm00001d006262_P001 Maize cytoskeleton, cytosol, peroxisome 11.56 64.94
Os09t0543100-02 Rice plasma membrane 62.54 63.35
KXG36094 Sorghum cytosol 62.77 63.21
Zm00001d006257_P009 Maize cytosol 62.31 62.97
CDX80734 Canola cytosol 8.79 62.81
GSMUA_Achr9P21120_001 Banana nucleus 18.15 62.3
TraesCS5A01G337100.2 Wheat cytosol 61.97 62.18
GSMUA_Achr1P14920_001 Banana plastid 56.76 61.84
CDX72557 Canola cytosol 61.73 61.73
TraesCS5B01G336100.1 Wheat cytosol 61.5 61.72
HORVU5Hr1G084740.4 Barley plastid 50.64 61.26
TraesCS5D01G341800.2 Wheat cytosol 58.61 61.23
CDY47037 Canola cytosol 61.97 60.56
CDY67335 Canola cytosol 59.77 59.7
CDY41630 Canola cytosol 59.54 59.4
Zm00001d022594_P002 Maize cytosol 60.46 59.1
GSMUA_Achr11P... Banana cytosol 56.76 59.01
CDY28756 Canola cytosol, extracellular 8.32 57.14
CDY41006 Canola mitochondrion 10.29 57.05
CDY13283 Canola mitochondrion 22.2 54.39
CDY51545 Canola cytosol 8.67 52.45
CDX86742 Canola cytosol 49.02 50.06
CDX90807 Canola cytosol 46.47 49.81
CDY64184 Canola mitochondrion 46.82 49.69
CDX90808 Canola cytosol 44.51 48.49
OQU84227 Sorghum cytosol 50.75 47.77
TraesCS6A01G071700.1 Wheat cytosol, nucleus, plastid 47.86 47.64
TraesCS6B01G096200.1 Wheat cytosol 47.63 47.63
Zm00001d015033_P001 Maize extracellular, plastid, vacuole 50.75 47.15
HORVU6Hr1G012780.6 Barley cytosol, nucleus, plastid 46.82 46.61
CDY46254 Canola cytosol 5.2 46.39
CDX97705 Canola cytosol 43.12 46.05
CDY30108 Canola cytosol 42.89 45.8
CDY21865 Canola cytosol 42.54 45.32
CDY20149 Canola cytosol, nucleus, peroxisome 11.1 45.07
CDX90066 Canola cytosol 50.52 44.87
CDX88175 Canola cytosol 38.27 44.67
CDY13284 Canola cytosol 23.35 44.01
CDX80505 Canola cytosol 39.65 43.97
CDY47540 Canola cytosol 41.16 43.84
CDY60551 Canola cytosol 40.69 43.35
CDY52961 Canola cytosol, nucleus, peroxisome 49.6 43.25
CDY54926 Canola cytosol, nucleus, peroxisome 49.71 42.87
CDY05351 Canola cytosol 40.23 42.7
CDY05490 Canola cytosol 40.23 42.7
CDY20148 Canola cytosol, peroxisome, plastid 19.19 41.6
CDY15144 Canola peroxisome 50.64 41.17
CDY70643 Canola cytosol, peroxisome 9.94 40.38
CDY24051 Canola cytosol 34.57 39.45
CDY33065 Canola cytosol 34.57 39.45
CDY42882 Canola nucleus 14.57 39.13
CDX87920 Canola cytosol 15.38 38.78
CDY63527 Canola cytosol 14.8 38.32
Os02t0120200-01 Rice extracellular 23.35 22.2
CDY18811 Canola cytosol, nucleus, peroxisome 23.12 19.1
CDX92096 Canola nucleus 23.01 18.39
CDX95904 Canola cytosol, nucleus, peroxisome 23.01 18.29
CDY51604 Canola cytosol 3.12 9.57
Protein Annotations
KEGG:00564+3.1.4.4KEGG:00565+3.1.4.4Gene3D:2.60.40.150Gene3D:3.30.870.10MapMan:5.7.2.4.3GO:A0A078HG45
UniProt:A0A078HG45InterPro:C2_domInterPro:C2_domain_sfEnsemblPlants:CDY35793ProteinID:CDY35793ProteinID:CDY35793.1
GO:GO:0003674GO:GO:0003824GO:GO:0004630GO:GO:0005488GO:GO:0005509GO:GO:0005575
GO:GO:0006629GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0009987GO:GO:0016020
GO:GO:0016042GO:GO:0016787GO:GO:0046470GO:GO:0070290EnsemblPlantsGene:GSBRNA2T00059286001InterPro:IPR000008
InterPro:IPR001736InterPro:IPR035892PFAM:PF00168PFAM:PF00614PFAM:PF12357PIRSF:PIRSF036470
InterPro:PLipase_D/transphosphatidylaseInterPro:PLipase_D_CInterPro:PLipase_D_famInterPro:PLipase_D_plnPFscan:PS50004PFscan:PS50035
PANTHER:PTHR18896PANTHER:PTHR18896:SF112MetaCyc:PWY-3561MetaCyc:PWY-7039SMART:SM00155SMART:SM00239
SUPFAM:SSF49562SUPFAM:SSF56024UniParc:UPI0004EDD3C9:::
Description
BnaA08g04540DPhospholipase D [Source:UniProtKB/TrEMBL;Acc:A0A078HG45]
Coordinates
chrLK032361:-:252760..257564
Molecular Weight (calculated)
98681.0 Da
IEP (calculated)
8.446
GRAVY (calculated)
-0.343
Length
865 amino acids
Sequence
(BLAST)
001: MANVKQSGLV YLHGDLELQI IEARYLPNMD LHFERIRRVF NTLNLFDKHS SSPKGSHRRT RNNIITSDPY VTVCLAGATV ARTRVISNSQ NPVWSEHFKI
101: PLAHPVSQIE FYVKDNDVFG ADLIGIATVS TAKIKLGETI NGWFPIIGSP KPDSAVRLEM RFVPYEKNPL YNHGITSTGV ANCYFPVRTG GHVTLYQDAH
201: VHDNMPEIEL EDGVLYQHER CWEDICHSIL EAHHMVYVIG WSIFHKVKLV RDQSRKLPNG GDLSLGDLLK YKSQEGVRVL LLVWDDRTSH SKFFINTTGV
301: MQTHDEETRK FFRRSSVTCV LSPRYASSKL SIFKQQVVGT VFSHHQKCVI VDTQASGNNR KIAAFIGGLD LCDGRYDTPE HRLFKGLDTV FQGDYHNPTF
401: SGGTKAPRQP WHDLHCKIEG PAAYDILINF EQRWKKATKW SEIGQKFKRV TRWHDDSLIK LERISWILSP STAVPTNDTL WVSKDDDKQN WHVQVFRSID
501: SGSLKGFPKD VHKAHAQNLV CAKNLVIEKS IQTAYIQAIR SAQHFIYIEN QYFIGSSFVW PNYKEAGADN LVPIELALKI ATKIRARERF AVYIVIPMWP
601: EGDPSSAPVQ EILYWQGQTM QMMYEIIARE IKHMDLENVN PQDYLNFYCL GNREELPSDQ NCVSSSGEMV PASQKWGRFM IYVHAKGMVV DDEYVLLGSA
701: NINQRSIAGS RDTEIAMGAY QNHQTWSHRS KHPRGQVYGY RMSLWAEHMG KIDDIFKEPE TLECVKRVNM ISEDNWKKYT DDSFVPLQGH LLKYPLSVDH
801: TGKVIPLSGF NSFPDVGGKI LGTQRLLSPH NSTRTLACYI YICAKPIICS LYTKFGTLVS FRLSA
Best Arabidopsis Sequence Match ( AT2G42010.1 )
(BLAST)
0001: MDNHGPRYPY PYGQYPYPYP YPAPYRPPSS EPYPPPPTNQ YSAPYYPYPP PPYATPPPYA SPPPPHQHTS GSHSGPLDYS HNPQPSSLAA APPEYHRHSF
0101: DYQPSPYPYQ PQGNFGAYGP PPPHYSYQEP AQYPPPETKP QEPLPPPQQT QGFQEYRRQD CLSTGGTGHD NVSNSGSSYP PVDELLGGLH ISTNQPGPSV
0201: PQLSSLPSNS WQSRPGDLYG YPNSSFPSNS HLPQLGRVDS SSSYYASTES PHSADMQMTL FGKGSLKVLL LHGNLDIWIY HAKNLPNMDM FHKTLGDMFG
0301: RLPGKIEGQL TSKITSDPYV SVSVAGAVIG RTYVMSNSEN PVWMQHFYVP VAHHAAEVHF VVKDSDVVGS QLIGLVTIPV EQIYSGAKIE GTYPILNSNG
0401: KPCKPGANLS LSIQYTPMDK LSVYHHGVGA GPDYQGVPGT YFPLRKGGTV RLYQDAHVPE GMLPGIRLDN GMSYEHGKCW HDMFDAIRQA RRLIYITGWS
0501: VWHKVKLIRD KLGPASECTL GELLRSKSQE GVRVLLLIWD DPTSRSILGY KTDGVMATHD EETRRFFKHS SVQVLLCPRN AGKRHSWVKQ REVGTIYTHH
0601: QKNVIVDADA GGNRRKIIAF VGGLDLCDGR YDTPQHPLFR TLQTIHKDDF HNPTFTGNLS GCPREPWHDL HSKIDGPAAY DVLTNFEERW LKAAKPSGIK
0701: KFKTSYDDAL LRIDRIPDIL GVSDTPTVSE NDPEAWHVQI FRSIDSNSVK GFPKDPKDAT CKNLVCGKNV LIDMSIHTAY VKAIRAAQHF IYIENQYFIG
0801: SSYNWNAHKD IGANNLIPME IALKIAEKIR ANERFAAYIV IPMWPEGVPT GAATQRILYW QHKTIQMMYE TIYKALVETG LEGAFSPQDY LNFFCLGNRE
0901: MVDGIDNSGT GSPSNANTPQ ALSRKSRRFM VYVHSKGMVV DDEYVVIGSA NINQRSMEGT RDTEIAMGAY QPQHTWARKH SGPRGQIYGY RMSLWAEHMA
1001: TLDDCFTQPE SIECVRKVRT MGERNWKQFA AEEVSDMRGH LLKYPVEVDR KGKVRPLPGS ETFPDVGGNI VGSFIAIQEN LTI
Arabidopsis Description
PLDBETA1phospholipase D beta 1 [Source:TAIR;Acc:AT2G42010]
SUBAcon: [peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.