CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY05490	Canola	cytosol	97.91	97.91
CDY70643	Canola	cytosol, peroxisome	25.4	97.18
CDX88175	Canola	cytosol	81.84	90.01
CDX80505	Canola	cytosol	85.28	89.1
AT5G25370.2	Thale cress	cytosol	85.77	85.24
VIT_04s0008g05450.t01	Wine grape	cytosol	60.49	63.53
CDY20149	Canola	cytosol, nucleus, peroxisome	16.44	62.91
CDY21865	Canola	cytosol	61.6	61.82
CDY30108	Canola	cytosol	61.1	61.48
CDX97705	Canola	cytosol	60.86	61.23
PGSC0003DMT400020297	Potato	cytosol	61.35	61.05
CDY60551	Canola	cytosol	60.74	60.96
CDY47540	Canola	cytosol	60.74	60.96
KRH52443	Soybean	cytosol	61.47	60.65
Solyc12g011170.1.1	Tomato	cytosol	61.23	58.84
KRH52444	Soybean	cytosol, plastid	58.65	58.22
KRH61774	Soybean	cytosol	24.05	56.16
CDY20148	Canola	cytosol, peroxisome, plastid	26.87	54.89
CDX87920	Canola	cytosol	22.58	53.64
CDY63527	Canola	cytosol	21.72	52.99
CDY41006	Canola	mitochondrion	9.94	51.92
CDY28756	Canola	cytosol, extracellular	7.85	50.79
CDY13283	Canola	mitochondrion	21.23	49.01
CDY51545	Canola	cytosol	7.98	45.45
CDX80734	Canola	cytosol	6.38	42.98
CDX72557	Canola	cytosol	44.29	41.73
CDY33065	Canola	cytosol	38.65	41.56
CDY24051	Canola	cytosol	38.65	41.56
CDX90807	Canola	cytosol	40.98	41.39
CDY64184	Canola	mitochondrion	41.35	41.35
CDY47037	Canola	cytosol	44.66	41.13
CDX86742	Canola	cytosol	42.7	41.09
CDY35793	Canola	cytosol	42.7	40.23
CDY67335	Canola	cytosol	42.45	39.95
CDY41630	Canola	cytosol	42.21	39.68
CDX90808	Canola	cytosol	38.65	39.67
CDX90066	Canola	cytosol	44.42	37.17
CDY52961	Canola	cytosol, nucleus, peroxisome	44.79	36.79
CDY54926	Canola	cytosol, nucleus, peroxisome	44.79	36.39
CDY15144	Canola	peroxisome	44.42	34.02
CDY13284	Canola	cytosol	18.77	33.33
CDY46254	Canola	cytosol	3.93	32.99
CDY42882	Canola	nucleus	11.9	30.12
CDX92096	Canola	nucleus	25.89	19.5
CDX95904	Canola	cytosol, nucleus, peroxisome	25.77	19.3
CDY18811	Canola	cytosol, nucleus, peroxisome	24.79	19.29
CDY51604	Canola	cytosol	2.58	7.45

Protein Annotations

KEGG:00564+3.1.4.4	KEGG:00565+3.1.4.4	Gene3D:2.60.40.150	Gene3D:3.30.870.10	MapMan:5.7.2.4.1	GO:A0A078EVR4
InterPro:C2_dom	InterPro:C2_domain_sf	EnsemblPlants:CDY05351	ProteinID:CDY05351	ProteinID:CDY05351.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0004630	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575	GO:GO:0006629
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016787	GO:GO:0046470
GO:GO:0070290	EnsemblPlantsGene:GSBRNA2T00120216001	InterPro:IPR000008	InterPro:IPR001736	InterPro:IPR035892	PFAM:PF00168
PFAM:PF00614	PFAM:PF12357	PIRSF:PIRSF036470	InterPro:PLipase_D/transphosphatidylase	InterPro:PLipase_D_C	InterPro:PLipase_D_fam
InterPro:PLipase_D_pln	PFscan:PS50035	PANTHER:PTHR18896	PANTHER:PTHR18896:SF89	MetaCyc:PWY-3561	MetaCyc:PWY-7039
SMART:SM00155	SMART:SM00239	SUPFAM:SSF49562	SUPFAM:SSF56024	UniParc:UPI0004EE74F0	SEG:seg

Description

BnaC02g40590D

Coordinates

chrLK031961:+:569998..573951

Molecular Weight (calculated)

92718.8 Da

IEP (calculated)

7.034

GRAVY (calculated)

-0.354

Length

815 amino acids

Sequence
(BLAST)

001: MAEQLLLHGT LEVKIYRIDR LHKRGRFSLC GTCSGNKEPA GKKIQSPIKN LTSSCTDLLG GHLYATVDLD RARVARTMMR RHPKWFQSFH LYAAHSISKI
101: IFTVKEDEPV SANLIGRAYL PVTEVITGQP VDRWLDLLDE HKSPIQGGSK IHIRVTFTSV THDVNWNKGI VIPSFKGVPN AFFNQREGCK VTLYQDAHVL
201: EDYQDITLSG GQVIYSHHRC WEDIFDAIWD AKHLIYITGW SVYTDITMIR DPKRPRQGGN LKLGELLKKK AEENVTVLML VWDDRTSNEA FKRDGLMMTH
301: DQETYNYFKN TKVRCVLCPR NPDNGSSLVQ GFEVAAMFTH HQKTVVVDAE RRIVSFLGGI DLCDGRYDTQ EHPLFGTLNN FHSNDFHQPN FDGASIKKGG
401: PREPWHDIHC KLDGPAAWDV LYNFEQRWMK QGIETKYLVS MERLSEITVP PLPFVKSDDV EGWTVQIFRS IDDGAVLGFP EDPREASSVG LITGKNNVIE
501: RSIQDAYINA IRRAKHFIYI ENQYFLGSSF GWSSRDVNIN EINALHLIPK EISLKIVSKI EAGERFSVYV VIPLWPEGKP GSASVQAILD WQRRTMEMMY
601: TDIVIALRKK GLDANPRDYL TFFCLGNREV NKAGEYSPPE KPAANSDYAR AQESRRFMIY VHSKMMIVDD EYIIIGSANI NQRSMDGGRD SEIAMGAYQP
701: NHLITTNQMK PTGQVFSFRI SLWLEHLRVI TNPFMFPESE ECIRMVNAKA DELWGLYSAQ VYPRDHDLPG HLLSYPISIG TNGEVTNLAG AELFPDTNAK
801: VFGEKSNYLP PILTT

Best Arabidopsis Sequence Match ( AT5G25370.2 )
(BLAST)

001: MTEQLLLHGT LEVKIYRIDK LHQRSRFNLC GKGNKEPTGK KTQSQIKRLT DSCTSLFGGH LYATIDLDRS RVARTMMRRH PKWLQSFHVY TAHSISKIIF
101: TVKEDEPVSA SLIGRAYLPV TEVITGQPID RWLDILDENR RPIQGGSKLH VRVKFTHVTQ DVNWNKGIIL PSFNGVPNAY FNQREGCKVT LYQDAHVLNE
201: YPDVTLTGGQ VIYKHHRCWE EIFDAIWEAK HLIYIAGWSV NTDVTLVRDP KRTRPGGDLK LGELLKKKAE ENVTVLMLVW DDRTSHEVFK RDGLMMTHDQ
301: ETYDYFKNTK VRCVLCPRNP DNGDSIVQGF EVATMFTHHQ KTIVVDSEVD GSLTKRRIVS FLGGIDLCDG RYDTVEHPLF GTLNSVHAND FHQPNFDGAS
401: IKKGGPREPW HDIHCKLDGP AAWDVLYNFE QRWMKQGSGR RYLISMAQLA EITVPPLPIV QPDNEEGWTV QVFRSIDDGA VEGFPEDPRE AASIGLISGK
501: DNVIERSIQD AYVNAIRRAK NFIYIENQYF LGSSFGWNSR DINLNEINAL QLIPKEISLK IVSKIEAGER FSVYIVIPLW PEGKPGSASV QAILDWQRRT
601: MEMMYTDIII ALRKKGLDAN PRDYLTFFCL GNREKGKVGE YLPPEKPEAN SDYARAQESR RFMIYVHSKM MIVDDEYIII GSANINQRSM DGGRDTEIAM
701: GAYQPSHLLS TNNMRPVGQI FSFRISLWLE HLRVTTNAFQ CPESEECIRM VNATADELWG LYSAQEYPRN DDLPGHLLSY PISIGSNGEV TNLAGTEFFP
801: DTNAKVVGEK SNYLPPILTS

Arabidopsis Description

PLDALPHA3Phospholipase D alpha 3 [Source:UniProtKB/Swiss-Prot;Acc:P58766]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.