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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • plastid 2
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus, plastid
BaCelLo:nucleus
iPSORT:plastid
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX89318
CDX94304
CDX97358

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G11850.1 CDX89318 AT4G26630.1 25387881
AT4G11850.1 CDX94304 AT4G26630.1 25387881
AT4G11850.1 CDX97358 AT4G26630.1 25387881
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra014871.1-P Field mustard cytosol 99.88 99.88
CDY13283 Canola mitochondrion 41.09 98.58
CDY13284 Canola cytosol 51.59 95.21
CDY41006 Canola mitochondrion 17.24 93.59
AT4G11850.1 Thale cress cytosol 93.62 92.42
AT4G11840.1 Thale cress cytosol 90.67 88.68
AT4G11830.2 Thale cress cytosol 87.96 87.03
CDY28756 Canola cytosol, extracellular 12.87 86.51
CDX90807 Canola cytosol 76.39 80.17
CDY46254 Canola cytosol 8.97 78.35
CDY64184 Canola mitochondrion 75.09 78.04
CDX90808 Canola cytosol 72.96 77.83
CDY51545 Canola cytosol 12.51 74.13
VIT_02s0025g04620.t01 Wine grape cytosol 69.54 69.29
TraesCS1D01G189300.1 Wheat cytosol 66.23 69.26
TraesCS1B01G195200.1 Wheat cytosol 65.88 68.89
Solyc08g080130.2.1 Tomato nucleus 68.59 68.68
PGSC0003DMT400058531 Potato plastid 68.59 68.43
KRH77467 Soybean nucleus 67.65 67.17
GSMUA_Achr8P12030_001 Banana plastid 62.69 66.04
KXG40331 Sorghum cytosol 62.81 64.41
TraesCS1A01G365100.2 Wheat mitochondrion 62.69 64.13
Zm00001d027386_P002 Maize cytosol 62.81 63.79
TraesCS1B01G382600.1 Wheat mitochondrion 62.34 63.77
Os03t0119100-01 Rice plasma membrane 62.81 63.71
HORVU4Hr1G085550.2 Barley cytosol 62.46 63.66
TraesCS1D01G370600.1 Wheat cytosol 62.22 63.65
TraesCS4D01G346700.1 Wheat cytosol 62.22 63.42
TraesCS5A01G520900.1 Wheat cytosol 61.75 62.94
HORVU1Hr1G079150.1 Barley cytosol 61.16 62.56
KRG93706 Soybean nucleus 21.25 61.86
Zm00001d050470_P001 Maize mitochondrion 28.93 61.56
TraesCS4B01G352300.1 Wheat cytosol 61.63 60.91
GSMUA_Achr4P24890_001 Banana cytosol, plastid 63.4 60.68
CDX90066 Canola cytosol 69.19 60.16
KRH77469 Soybean nucleus 4.84 58.57
KRH77470 Soybean cytosol 9.45 58.39
CDY52961 Canola cytosol, nucleus, peroxisome 66.47 56.75
CDY54926 Canola cytosol, nucleus, peroxisome 66.59 56.23
GSMUA_Achr5P20150_001 Banana cytosol 65.76 55.87
Zm00001d015818_P002 Maize cytosol, nucleus, peroxisome 18.06 55.23
CDY15144 Canola peroxisome 69.19 55.08
Zm00001d029684_P001 Maize peroxisome 65.53 52.96
EER92041 Sorghum cytosol, nucleus, peroxisome 65.53 52.71
Zm00001d015256_P001 Maize cytosol 25.62 52.42
Os10t0524400-01 Rice plasma membrane 64.7 52.39
TraesCS1A01G187400.1 Wheat peroxisome 66.71 51.04
HORVU1Hr1G048970.1 Barley cytosol, nucleus, peroxisome 65.88 50.32
CDY67335 Canola cytosol 51.24 50.12
CDY41630 Canola cytosol 51.0 49.83
CDX72557 Canola cytosol 50.89 49.83
CDY47037 Canola cytosol 51.36 49.15
CDY35793 Canola cytosol 50.06 49.02
CDY20149 Canola cytosol, nucleus, peroxisome 11.92 47.42
CDX80734 Canola cytosol 6.73 47.11
CDY70643 Canola cytosol, peroxisome 11.45 45.54
CDY30108 Canola cytosol 43.45 45.43
CDX97705 Canola cytosol 43.33 45.31
CDX88175 Canola cytosol 39.55 45.21
CDY60551 Canola cytosol 43.09 44.95
CDY47540 Canola cytosol 42.98 44.83
CDX80505 Canola cytosol 40.73 44.23
CDY21865 Canola cytosol 42.27 44.09
CDY05490 Canola cytosol 41.32 42.94
CDY05351 Canola cytosol 41.09 42.7
CDY24051 Canola cytosol 35.42 39.58
CDY33065 Canola cytosol 35.18 39.31
CDY20148 Canola cytosol, peroxisome, plastid 18.3 38.85
CDX87920 Canola cytosol 15.23 37.61
CDY63527 Canola cytosol 14.76 37.43
CDY42882 Canola nucleus 13.58 35.71
CDY18811 Canola cytosol, nucleus, peroxisome 21.37 17.29
CDX92096 Canola nucleus 21.72 17.01
CDX95904 Canola cytosol, nucleus, peroxisome 21.61 16.82
CDY51604 Canola cytosol 2.13 6.38
Protein Annotations
KEGG:00564+3.1.4.4KEGG:00565+3.1.4.4Gene3D:2.60.40.150Gene3D:3.30.870.10MapMan:5.7.2.4.2GO:A0A078DCG6
InterPro:C2_domInterPro:C2_domain_sfEnsemblPlants:CDX86742ProteinID:CDX86742ProteinID:CDX86742.1GO:GO:0003674
GO:GO:0003824GO:GO:0004630GO:GO:0005488GO:GO:0005509GO:GO:0005575GO:GO:0006629
GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016020GO:GO:0016787GO:GO:0046470
GO:GO:0070290EnsemblPlantsGene:GSBRNA2T00145455001InterPro:IPR000008InterPro:IPR001736InterPro:IPR035892PFAM:PF00168
PFAM:PF00614PFAM:PF12357PIRSF:PIRSF036470InterPro:PLipase_D/transphosphatidylaseInterPro:PLipase_D_CInterPro:PLipase_D_fam
InterPro:PLipase_D_plnPFscan:PS50004PFscan:PS50035PANTHER:PTHR18896PANTHER:PTHR18896:SF65MetaCyc:PWY-3561
MetaCyc:PWY-7039SMART:SM00155SMART:SM00239SUPFAM:SSF49562SUPFAM:SSF56024UniParc:UPI0004EEE1AF
Description
BnaA09g21320D
Coordinates
chrLK031847:+:350852..354846
Molecular Weight (calculated)
94451.6 Da
IEP (calculated)
8.563
GRAVY (calculated)
-0.380
Length
847 amino acids
Sequence
(BLAST)
001: MGGGSSHGFG QQPVPFATSS GSLRVELLHG NLDIWVKEAK HLPNMDGFHN RLGGMLSGLT RRNTSKDEKP SKITSDPYVT VSISGAVIGR TFVISNSENP
101: VWMQHFDVPV AHSAAEVHFV VKDSDIIGSQ IMGAVGIPTE QLSSGNRIEG FFPILNSSGK PCKQGAVLSL SVQYTPIERM RLYQMGVGFG NECVGVPGTY
201: FPLRKGGRVT LYQDAHVDDG TLPSVYLDGG VQYRHGKCWE DMADAIRQAR RLVYITGWSV YHPVRLVRRN NDPTDGTLGD LLKAKSQEGV RVLVLVWDDP
301: TSRSLLGFKT QGVMNTSDEE TRRFFKHSSV QVLLCPRSGG KGHSFVKKSE VGTIYTHHQK TVIVDADAGQ NRRKIVAFVG GLDVCNGRFD TPKHPLFRTL
401: KTLHKDDFHN PNFLTTADDG PREPWHDLHS KIDGPAAYDV LANFEERWRK ASKSRGLGKL RSASDDSLLS IERIQDIVGL SEASSVNEND PETWHAQVFR
501: SIDSSSVKGF PKDPKEATGR NLLCGKNILI DMSIHAAYVK AIRSAQHFIY IENQYFLGSS FNWDSNKDLG ANNLIPIEIA LKIANKIRAR EKFAAYIVIP
601: MWPEGAPTSN PIQRILYWQH KTMQMMYQTI HKALVEVGLD GQYEPQDFLN FFCLGTREVA DGTVSVYNSP RTPPKSNANA NAIQVQALKS RRFMIYVHSK
701: GMVVDDEFVL IGSANINQRS LEGTRDTEIA MGGYQPHHSW AKKGSRPRGQ IFGYRMSLWA EHLGFLEQGF EEPENMECVR RVRQLSELNW RQYAAEEVTE
801: MQGHLLKYPV QVDRTGKVSS LPGCETFPDL GGKIIGSFLA LQENLTI
Best Arabidopsis Sequence Match ( AT4G11850.1 )
(BLAST)
001: MAYHPAYTET MSMGGGSSHG GGQQYVPFAT SSGSLRVELL HGNLDIWVKE AKHLPNMDGF HNRLGGMLSG LGRKKVEGEK SSKITSDPYV TVSISGAVIG
101: RTFVISNSEN PVWMQHFDVP VAHSAAEVHF VVKDSDIIGS QIMGAVGIPT EQLCSGNRIE GLFPILNSSG KPCKQGAVLG LSIQYTPMER MRLYQMGVGS
201: GNECVGVPGT YFPLRKGGRV TLYQDAHVDD GTLPSVHLDG GIQYRHGKCW EDMADAIRQA RRLIYITGWS VFHPVRLVRR TNDPTEGTLG ELLKVKSQEG
301: VRVLVLVWDD PTSRSLLGFK TQGVMNTSDE ETRRFFKHSS VQVLLCPRSG GKGHSFIKKS EVGTIYTHHQ KTVIVDAEAA QNRRKIVAFV GGLDLCNGRF
401: DTPKHPLFRT LKTLHKDDFH NPNFVTTADD GPREPWHDLH SKIDGPAAYD VLANFEERWM KASKPRGIGK LKSSSDDSLL RIDRIPDIVG LSEASSANDN
501: DPESWHVQVF RSIDSSSVKG FPKDPKEATG RNLLCGKNIL IDMSIHAAYV KAIRSAQHFI YIENQYFLGS SFNWDSNKDL GANNLIPMEI ALKIANKIRA
601: REKFAAYIVI PMWPEGAPTS NPIQRILYWQ HKTMQMMYQT IYKALVEVGL DSQFEPQDFL NFFCLGTREV PVGTVSVYNS PRKPPQPNAN ANAAQVQALK
701: SRRFMIYVHS KGMVVDDEFV LIGSANINQR SLEGTRDTEI AMGGYQPHYS WAMKGSRPHG QIFGYRMSLW AEHLGFLEQG FEEPENMECV RRVRQLSELN
801: WRQYAAEEVT EMSGHLLKYP VQVDRTGKVS SLPGCETFPD LGGKIIGSFL ALQENLTI
Arabidopsis Description
PLDGAMMA1Phospholipase D gamma 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9T053]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.