Factsheet for HORVU1Hr1G048970.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

peroxisome 1
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, peroxisome
Any Predictor:	cytosol, nucleus, peroxisome
MultiLoc:	peroxisome
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU4Hr1G035250.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G11850.1	HORVU4Hr1G035250.1	AT4G26630.1	25387881

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G195200.1	Wheat	cytosol	71.69	98.15
TraesCS1D01G189300.1	Wheat	cytosol	71.6	98.02
TraesCS1A01G187400.1	Wheat	peroxisome	94.59	94.76
HORVU1Hr1G079150.1	Barley	cytosol	61.32	82.13
Os10t0524400-01	Rice	plasma membrane	75.47	80.02
EER92041	Sorghum	cytosol, nucleus, peroxisome	75.83	79.87
PGSC0003DMT400000378	Potato	cytosol	17.94	75.95
HORVU4Hr1G085550.2	Barley	cytosol	55.55	74.13
GSMUA_Achr8P12030_001	Banana	plastid	53.56	73.88
PGSC0003DMT400026602	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	20.29	73.53
CDY41006	Canola	mitochondrion	10.01	71.15
CDY13283	Canola	mitochondrion	22.36	70.25
Bra022740.1-P	Field mustard	cytosol, extracellular	7.75	68.25
CDY28756	Canola	cytosol, extracellular	7.75	68.25
KRG89825	Soybean	cytoskeleton, cytosol, peroxisome	17.76	67.7
VIT_02s0025g04620.t01	Wine grape	cytosol	51.85	67.65
Solyc08g080130.2.1	Tomato	nucleus	51.58	67.61
PGSC0003DMT400058531	Potato	plastid	51.67	67.49
Bra000752.1-P	Field mustard	cytosol, nucleus, peroxisome	32.01	67.49
GSMUA_Achr5P20150_001	Banana	cytosol	59.96	66.7
CDX86742	Canola	cytosol	50.32	65.88
Bra014871.1-P	Field mustard	cytosol	50.23	65.76
AT4G11850.1	Thale cress	cytosol	50.59	65.38
Solyc01g091910.2.1	Tomato	plastid	52.75	65.36
KRH77467	Soybean	nucleus	49.95	64.95
AT4G00240.1	Thale cress	cytosol	54.01	64.62
CDX90066	Canola	cytosol	56.54	64.37
CDX90807	Canola	cytosol	46.35	63.69
CDY64184	Canola	mitochondrion	46.71	63.56
AT4G11840.1	Thale cress	cytosol	49.41	63.28
AT4G11830.2	Thale cress	cytosol	48.69	63.08
CDY52961	Canola	cytosol, nucleus, peroxisome	55.46	62.0
CDY54926	Canola	cytosol, nucleus, peroxisome	55.91	61.81
KRG93706	Soybean	nucleus	15.96	60.82
CDX90808	Canola	cytosol	43.46	60.71
CDY15144	Canola	peroxisome	58.07	60.53
Bra000753.1-P	Field mustard	cytosol	43.28	60.45
Bra033225.1-P	Field mustard	cytosol	58.07	60.19
KRH65182	Soybean	cytosol	41.12	60.08
CDY13284	Canola	cytosol	24.62	59.48
KRH77470	Soybean	cytosol	7.3	59.12
VIT_15s0048g01160.t01	Wine grape	cytosol	57.53	58.69
KRH77469	Soybean	nucleus	3.7	58.57
KRH48290	Soybean	nucleus	55.27	58.55
AT2G42010.2	Thale cress	peroxisome	58.07	58.12
KRH01625	Soybean	cytosol	57.26	57.89
KRH70487	Soybean	cytosol	56.9	57.05
Solyc10g017650.1.1	Tomato	cytosol	54.19	53.71
CDY46254	Canola	cytosol	4.69	53.61
HORVU5Hr1G060030.2	Barley	cytosol	39.49	52.2
HORVU5Hr1G084740.4	Barley	plastid	31.56	48.95
HORVU7Hr1G089960.3	Barley	cytosol	33.72	45.61
HORVU3Hr1G024530.2	Barley	plastid	33.18	45.32
Bra008515.1-P	Field mustard	mitochondrion, plastid	55.91	42.76
HORVU1Hr1G025370.1	Barley	cytosol	32.73	42.46
HORVU6Hr1G012780.6	Barley	cytosol, nucleus, plastid	33.18	42.35
HORVU0Hr1G009480.5	Barley	extracellular, peroxisome	24.89	42.2
HORVU1Hr1G082890.5	Barley	cytosol	31.47	42.2
HORVU1Hr1G082940.1	Barley	cytosol	31.02	41.35
HORVU1Hr1G082950.2	Barley	nucleus	31.11	40.88
HORVU5Hr1G064520.1	Barley	cytosol	29.4	39.23
HORVU7Hr1G082870.1	Barley	cytosol	17.13	34.61
HORVU1Hr1G059050.25	Barley	plastid	17.22	16.42

Protein Annotations

KEGG:00564+3.1.4.4	KEGG:00565+3.1.4.4	Gene3D:2.60.40.150	Gene3D:3.30.870.10	MapMan:5.7.2.4.2	UniProt:A0A287FGW7
InterPro:C2_dom	InterPro:C2_domain_sf	GO:GO:0003674	GO:GO:0003824	EnsemblPlantsGene:HORVU1Hr1G048970	EnsemblPlants:HORVU1Hr1G048970.1
InterPro:IPR000008	InterPro:IPR001736	InterPro:IPR035892	PFAM:PF00168	PFAM:PF00614	PFAM:PF12357
InterPro:PLipase_D/transphosphatidylase	InterPro:PLipase_D_C	InterPro:PLipase_D_fam	PFscan:PS50004	PFscan:PS50035	PANTHER:PTHR18896
PANTHER:PTHR18896:SF61	SMART:SM00155	SMART:SM00239	SUPFAM:SSF49562	SUPFAM:SSF56024	UniParc:UPI000B473759
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr1H:-:363556027..363563362

Molecular Weight (calculated)

123616.0 Da

IEP (calculated)

7.343

GRAVY (calculated)

-0.538

Length

1109 amino acids

Sequence
(BLAST)

0001: MEGSNHGGQG QPQHQYHQYP PHPQPEPYPY PYQHQQYPPP SAAPASHYLA PSPSFPAYSP APPPPQQFAH HSGPLQPYPP PAPHQQQAYP PQHAYPPHSQ
0101: QQHGYPPQSP SPYGYDPYPA YPSYPSPAHP SYPSPAVSHS SSFHHQPHPS APDHPAAAYP SPAVSHSSSF HHQPHPSAPD HPAAAYPSPA VSHSSSFHHQ
0201: PHPSAPESPA AYYPSPAISP SSSFHNHPHP SAPESPAAST PHYPIVDGFA NMNLSGRHNY TQAPVSSPSV LPPSASFSNG GGMQMVPYGT VAGGSQHGSM
0301: RASLKVVLLH GSLDIWVHDA KNLPNKDMFS KRVSELLSVG GKSNAKMTSD PYVTIQVSYA TVARTYVVSN SENPVWEQNF HVPVGHESAE VEFVVKDSDV
0401: FGAQLIGTVA IPAESLLSGD RVEGVYPVLE PNGKPCAPGA VLRLSIQYIP VARLTMYHHG VIAGPDCLGV PNTYFPLRRG MRVTLYQDAH VPDGSLPDIW
0501: LDHGLRYQHG QCWRDMYNAI SQARRLIYIV GWSVFHTIHL IRDGAEKAPS LGELLKMKSQ EGVRVLLLVW DDPTSRSILG FKMDGFMGTR DEETRRFFKH
0601: SSVQVLLCPR SAGKRHSWVK QQETGTIFTH HQKTVIVDAD AGNYRRKIIA FVGGLDLCGG RYDTPGHPLF QTLQTSHKED YYNPNFAAVD ARGPREPWHD
0701: LHSRIDGPAA YDVLRNFEER WLKASKRHGI KKLGKSNDDA LLKIERIHDI VNIDDAIYFS DNDPETWHVQ VFRSIDSNSA KGFPKDPRVA TMKNLVCGKN
0801: VLIDMSIHTA YVNAIRAAQH FIYIENQYFI GSSFNWDSNK DIGANNLVPI EIALKIANKI KAKERFSAYI VVPMWPEGNP TGAPTQRILY WQNKTMQMMY
0901: ETIYRALKEV GLDDIYEPQD YLNFFCLGNR EIEDSPSTPS TANNPQDQAR KNRRFMVYVH SKGMIVDDEY VIIGSANINQ RSLEGIRDTE IAMGAYQPQY
1001: TWANKISAPR GQIYGYRMSL WAEHIGIIEE DFNHPESLEC MRRVRQLGQH NWDQFFANEV TEMRGHLLKY PVSVDRKGKV KPLPGCATFP DMGGNICGSF
1101: TAIQENLTI

Best Arabidopsis Sequence Match ( AT2G42010.1 )
(BLAST)

0001: MDNHGPRYPY PYGQYPYPYP YPAPYRPPSS EPYPPPPTNQ YSAPYYPYPP PPYATPPPYA SPPPPHQHTS GSHSGPLDYS HNPQPSSLAA APPEYHRHSF
0101: DYQPSPYPYQ PQGNFGAYGP PPPHYSYQEP AQYPPPETKP QEPLPPPQQT QGFQEYRRQD CLSTGGTGHD NVSNSGSSYP PVDELLGGLH ISTNQPGPSV
0201: PQLSSLPSNS WQSRPGDLYG YPNSSFPSNS HLPQLGRVDS SSSYYASTES PHSADMQMTL FGKGSLKVLL LHGNLDIWIY HAKNLPNMDM FHKTLGDMFG
0301: RLPGKIEGQL TSKITSDPYV SVSVAGAVIG RTYVMSNSEN PVWMQHFYVP VAHHAAEVHF VVKDSDVVGS QLIGLVTIPV EQIYSGAKIE GTYPILNSNG
0401: KPCKPGANLS LSIQYTPMDK LSVYHHGVGA GPDYQGVPGT YFPLRKGGTV RLYQDAHVPE GMLPGIRLDN GMSYEHGKCW HDMFDAIRQA RRLIYITGWS
0501: VWHKVKLIRD KLGPASECTL GELLRSKSQE GVRVLLLIWD DPTSRSILGY KTDGVMATHD EETRRFFKHS SVQVLLCPRN AGKRHSWVKQ REVGTIYTHH
0601: QKNVIVDADA GGNRRKIIAF VGGLDLCDGR YDTPQHPLFR TLQTIHKDDF HNPTFTGNLS GCPREPWHDL HSKIDGPAAY DVLTNFEERW LKAAKPSGIK
0701: KFKTSYDDAL LRIDRIPDIL GVSDTPTVSE NDPEAWHVQI FRSIDSNSVK GFPKDPKDAT CKNLVCGKNV LIDMSIHTAY VKAIRAAQHF IYIENQYFIG
0801: SSYNWNAHKD IGANNLIPME IALKIAEKIR ANERFAAYIV IPMWPEGVPT GAATQRILYW QHKTIQMMYE TIYKALVETG LEGAFSPQDY LNFFCLGNRE
0901: MVDGIDNSGT GSPSNANTPQ ALSRKSRRFM VYVHSKGMVV DDEYVVIGSA NINQRSMEGT RDTEIAMGAY QPQHTWARKH SGPRGQIYGY RMSLWAEHMA
1001: TLDDCFTQPE SIECVRKVRT MGERNWKQFA AEEVSDMRGH LLKYPVEVDR KGKVRPLPGS ETFPDVGGNI VGSFIAIQEN LTI

Arabidopsis Description

PLDBETA1phospholipase D beta 1 [Source:TAIR;Acc:AT2G42010]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.