Factsheet for HORVU6Hr1G012780.6

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

cytosol 1
plastid 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plastid
Any Predictor:	cytosol, nucleus, plastid
MultiLoc:	cytosol
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G071700.1	Wheat	cytosol, nucleus, plastid	93.44	93.44
TraesCS6B01G096200.1	Wheat	cytosol	91.83	92.25
OQU84227	Sorghum	cytosol	64.9	61.37
Zm00001d015033_P001	Maize	extracellular, plastid, vacuole	63.75	59.51
PGSC0003DMT400009253	Potato	cytosol	16.34	54.41
Bra034939.1-P	Field mustard	cytosol	46.95	48.98
KRH60977	Soybean	cytosol	47.64	48.88
Solyc04g082000.2.1	Tomato	cytosol	47.18	48.87
PGSC0003DMT400025590	Potato	cytosol	45.45	48.71
GSMUA_Achr11P...	Banana	cytosol	46.61	48.68
KRH51648	Soybean	cytosol	47.41	48.64
Solyc02g061850.2.1	Tomato	cytosol	46.84	47.88
AT4G35790.1	Thale cress	cytosol	47.64	47.7
VIT_18s0001g00770.t01	Wine grape	nucleus	47.87	47.54
Solyc02g083340.2.1	Tomato	nucleus	47.3	47.46
CDX72557	Canola	cytosol	46.84	47.05
Bra017730.1-P	Field mustard	cytosol	45.34	46.96
VIT_00s0264g00100.t01	Wine grape	cytosol	47.07	46.85
HORVU5Hr1G060030.2	Barley	cytosol	45.22	46.84
CDY35793	Canola	cytosol	46.61	46.82
KRH76589	Soybean	extracellular	46.26	46.53
Bra010512.1-P	Field mustard	cytosol	43.15	46.47
CDY47037	Canola	cytosol	47.07	46.21
KRH28860	Soybean	mitochondrion	46.03	46.19
CDY67335	Canola	cytosol	45.8	45.96
HORVU5Hr1G084740.4	Barley	plastid	37.63	45.73
CDY41630	Canola	cytosol	45.57	45.67
HORVU1Hr1G079150.1	Barley	cytosol	42.12	44.2
PGSC0003DMT400009250	Potato	cytosol	28.08	44.12
HORVU4Hr1G085550.2	Barley	cytosol	42.0	43.92
KRH37270	Soybean	cytosol	13.0	42.97
CDX80734	Canola	cytosol	5.87	42.15
HORVU1Hr1G082890.5	Barley	cytosol	37.17	39.06
HORVU3Hr1G024530.2	Barley	plastid	36.13	38.67
HORVU1Hr1G082940.1	Barley	cytosol	36.71	38.34
HORVU7Hr1G089960.3	Barley	cytosol	36.13	38.29
HORVU1Hr1G082950.2	Barley	nucleus	36.48	37.56
HORVU1Hr1G025370.1	Barley	cytosol	36.36	36.96
HORVU5Hr1G064520.1	Barley	cytosol	33.72	35.26
HORVU0Hr1G009480.5	Barley	extracellular, peroxisome	26.01	34.56
HORVU1Hr1G048970.1	Barley	cytosol, nucleus, peroxisome	42.35	33.18
Os02t0120200-01	Rice	extracellular	33.26	31.76
CDY42882	Canola	nucleus	11.28	30.43
HORVU7Hr1G082870.1	Barley	cytosol	18.3	28.96
HORVU1Hr1G059050.25	Barley	plastid	19.79	14.79

Protein Annotations

KEGG:00564+3.1.4.4	KEGG:00565+3.1.4.4	Gene3D:3.30.870.10	MapMan:50.3.1	UniProt:A0A287TCF6	InterPro:C2_dom
ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0004630	GO:GO:0005488	GO:GO:0005509
GO:GO:0005575	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987
GO:GO:0016020	GO:GO:0016042	GO:GO:0016787	GO:GO:0046470	GO:GO:0070290	EnsemblPlantsGene:HORVU6Hr1G012780
EnsemblPlants:HORVU6Hr1G012780.6	InterPro:IPR000008	InterPro:IPR001736	PFAM:PF00168	PFAM:PF00614	PFAM:PF12357
PIRSF:PIRSF036470	InterPro:PLipase_D/transphosphatidylase	InterPro:PLipase_D_C	InterPro:PLipase_D_fam	InterPro:PLipase_D_pln	PFscan:PS50035
PANTHER:PTHR18896	PANTHER:PTHR18896:SF70	SMART:SM00155	SMART:SM00239	SUPFAM:SSF49562	SUPFAM:SSF56024
UniParc:UPI000B4861C9	SEG:seg	:	:	:	:

Description

Phospholipase D [Source:UniProtKB/TrEMBL;Acc:A0A287TCF6]

Coordinates

chrchr6H:-:25288731..25293357

Molecular Weight (calculated)

96543.1 Da

IEP (calculated)

7.930

GRAVY (calculated)

-0.420

Length

869 amino acids

Sequence
(BLAST)

001: MSSMADDGER LELLHGDLDL TIHEACGLPN MDVLSTILRR LCIRPRRLPS RNVDADTDAD SPLPRRRRRR QKPRGRHSIV PTSDPYAVVA VSRPDGPDTT
101: LARTYVVRNS EAPDWSARIR IPLAHEASRL VFQVRDSDPF GSDLIGAASL PAADLLHGGP IVDAWLQLLR PDGRGPPKPN SAIRVSLTFT QAPPSSSRRR
201: HFGGVPAYFP ARRGCELKLY QDAHVPMGAP CSYERGRCWE DVCMAVLGAQ KLVYVAGWAV GARVRLLREE MSPEMAEKAA EVRALAGVEV EKMAFGDMLK
301: YKSQEGVRVC LLVSDHHDTP LHPSFFLNTG GMMQTSGEDT KKFFKHSSVI CILSHRYPRS KVEMAKQKVV GTPYAHNQKC ILVDTPASEA TRRITAFLGG
401: LDLADGRYDT PAHRLFGDLD TVFPGDIHNP TLGDAAVHHG PRLPWHDMHC RLDGAAAYDV LKNFEQRWRR ATAKHLKASK HGKDDALLKL QRIPWILSQD
501: VAHGEGHALR VLPEGDPRCW HAQVFRSVDA GSVKGFPRSW ETEEMEARHL LCDKSLAVEQ SIHAAYVAAV RAADRFVYLE TERFVGSSYA WPRSFRHPGA
601: GNLVPMEIAL KAASKIRAGE DFAAYVVLPM WPAAEGPPGS APAQEALFWQ GKTMQAMYEV VAKAIAEAGG RAHPQDYLNF YCLGNRELAP PAPRGLDGRA
701: AETGTSPAAL ARRHGRFMVY VHSKGMVVDD EYVLLGSANV NQRSLSGSRD TEIAVGAHQP HQTGRRPRGQ VHQYRMSLWE EHLGRLDEVL KAPESPECVR
801: RVNQVARENW ERYTDEGEVV EEMQGHLMRY PVEVDDDGSV WPLTGHEFFP DVGGRVLGST NKFPDHLTM

Best Arabidopsis Sequence Match ( AT2G42010.1 )
(BLAST)

0001: MDNHGPRYPY PYGQYPYPYP YPAPYRPPSS EPYPPPPTNQ YSAPYYPYPP PPYATPPPYA SPPPPHQHTS GSHSGPLDYS HNPQPSSLAA APPEYHRHSF
0101: DYQPSPYPYQ PQGNFGAYGP PPPHYSYQEP AQYPPPETKP QEPLPPPQQT QGFQEYRRQD CLSTGGTGHD NVSNSGSSYP PVDELLGGLH ISTNQPGPSV
0201: PQLSSLPSNS WQSRPGDLYG YPNSSFPSNS HLPQLGRVDS SSSYYASTES PHSADMQMTL FGKGSLKVLL LHGNLDIWIY HAKNLPNMDM FHKTLGDMFG
0301: RLPGKIEGQL TSKITSDPYV SVSVAGAVIG RTYVMSNSEN PVWMQHFYVP VAHHAAEVHF VVKDSDVVGS QLIGLVTIPV EQIYSGAKIE GTYPILNSNG
0401: KPCKPGANLS LSIQYTPMDK LSVYHHGVGA GPDYQGVPGT YFPLRKGGTV RLYQDAHVPE GMLPGIRLDN GMSYEHGKCW HDMFDAIRQA RRLIYITGWS
0501: VWHKVKLIRD KLGPASECTL GELLRSKSQE GVRVLLLIWD DPTSRSILGY KTDGVMATHD EETRRFFKHS SVQVLLCPRN AGKRHSWVKQ REVGTIYTHH
0601: QKNVIVDADA GGNRRKIIAF VGGLDLCDGR YDTPQHPLFR TLQTIHKDDF HNPTFTGNLS GCPREPWHDL HSKIDGPAAY DVLTNFEERW LKAAKPSGIK
0701: KFKTSYDDAL LRIDRIPDIL GVSDTPTVSE NDPEAWHVQI FRSIDSNSVK GFPKDPKDAT CKNLVCGKNV LIDMSIHTAY VKAIRAAQHF IYIENQYFIG
0801: SSYNWNAHKD IGANNLIPME IALKIAEKIR ANERFAAYIV IPMWPEGVPT GAATQRILYW QHKTIQMMYE TIYKALVETG LEGAFSPQDY LNFFCLGNRE
0901: MVDGIDNSGT GSPSNANTPQ ALSRKSRRFM VYVHSKGMVV DDEYVVIGSA NINQRSMEGT RDTEIAMGAY QPQHTWARKH SGPRGQIYGY RMSLWAEHMA
1001: TLDDCFTQPE SIECVRKVRT MGERNWKQFA AEEVSDMRGH LLKYPVEVDR KGKVRPLPGS ETFPDVGGNI VGSFIAIQEN LTI

Arabidopsis Description

PLDBETA1phospholipase D beta 1 [Source:TAIR;Acc:AT2G42010]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.