Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX72557 | Canola | cytosol | 85.14 | 85.43 |
| Bra017730.1-P | Field mustard | cytosol | 82.03 | 84.86 |
| CDY47037 | Canola | cytosol | 85.6 | 83.95 |
| KRH28860 | Soybean | mitochondrion | 70.39 | 70.55 |
| VIT_00s0264g00100.t01 | Wine grape | cytosol | 70.85 | 70.45 |
| KRH76589 | Soybean | extracellular | 70.05 | 70.37 |
| Solyc02g083340.2.1 | Tomato | nucleus | 69.12 | 69.28 |
| Solyc02g061850.2.1 | Tomato | cytosol | 67.28 | 68.71 |
| PGSC0003DMT400009253 | Potato | cytosol | 20.62 | 68.58 |
| PGSC0003DMT400009250 | Potato | cytosol | 43.55 | 68.35 |
| Zm00001d006262_P001 | Maize | cytoskeleton, cytosol, peroxisome | 11.98 | 67.53 |
| GSMUA_Achr1P07360_001 | Banana | cytosol | 55.99 | 66.39 |
| GSMUA_AchrUn_... | Banana | cytosol | 64.4 | 65.15 |
| Os09t0543100-02 | Rice | plasma membrane | 63.71 | 64.75 |
| TraesCS5A01G337100.2 | Wheat | cytosol | 63.82 | 64.27 |
| KXG36094 | Sorghum | cytosol | 63.48 | 64.14 |
| TraesCS5B01G336100.1 | Wheat | cytosol | 63.59 | 64.04 |
| TraesCS5D01G341800.2 | Wheat | cytosol | 61.06 | 64.01 |
| GSMUA_Achr1P14920_001 | Banana | plastid | 58.53 | 63.98 |
| Zm00001d006257_P009 | Maize | cytosol | 62.56 | 63.43 |
| HORVU5Hr1G084740.4 | Barley | plastid | 51.15 | 62.1 |
| GSMUA_Achr9P21120_001 | Banana | nucleus | 17.63 | 60.71 |
| GSMUA_Achr11P... | Banana | cytosol | 57.14 | 59.62 |
| Zm00001d022594_P002 | Maize | cytosol | 60.48 | 59.32 |
| AT4G11850.1 | Thale cress | cytosol | 50.23 | 50.82 |
| AT4G11830.2 | Thale cress | cytosol | 49.88 | 50.58 |
| AT4G11840.1 | Thale cress | cytosol | 50.0 | 50.12 |
| OQU84227 | Sorghum | cytosol | 52.42 | 49.51 |
| TraesCS6B01G096200.1 | Wheat | cytosol | 48.39 | 48.55 |
| Zm00001d015033_P001 | Maize | extracellular, plastid, vacuole | 52.07 | 48.55 |
| TraesCS6A01G071700.1 | Wheat | cytosol, nucleus, plastid | 48.39 | 48.33 |
| HORVU6Hr1G012780.6 | Barley | cytosol, nucleus, plastid | 47.7 | 47.64 |
| AT4G00240.1 | Thale cress | cytosol | 50.58 | 47.36 |
| AT3G15730.1 | Thale cress | cytosol | 42.05 | 45.06 |
| AT1G52570.1 | Thale cress | cytosol | 40.78 | 43.7 |
| AT5G25370.2 | Thale cress | cytosol | 40.44 | 42.8 |
| AT2G42010.2 | Thale cress | peroxisome | 52.42 | 41.06 |
| AT1G55180.1 | Thale cress | cytosol | 33.06 | 37.66 |
| Os02t0120200-01 | Rice | extracellular | 24.42 | 23.3 |
| AT3G05630.1 | Thale cress | cytosol | 22.81 | 18.93 |
| AT3G16785.4 | Thale cress | plastid | 23.96 | 18.26 |
Protein Annotations
| KEGG:00564+3.1.4.4 | KEGG:00565+3.1.4.4 | Gene3D:3.30.870.10 | MapMan:5.7.2.4.3 | EntrezGene:829733 | EMBL:AB031047 |
| ProteinID:AEE86571.1 | ProteinID:AEE86572.1 | EMBL:AF274239 | EMBL:AF306345 | EMBL:AF322228 | EMBL:AF424632 |
| EMBL:AK227213 | ArrayExpress:AT4G35790 | EnsemblPlantsGene:AT4G35790 | RefSeq:AT4G35790 | TAIR:AT4G35790 | RefSeq:AT4G35790-TAIR-G |
| EnsemblPlants:AT4G35790.1 | TAIR:AT4G35790.1 | Symbol:ATPLDDELTA | EMBL:AY113045 | Unigene:At.22959 | InterPro:C2_dom |
| ProteinID:CAA21465.1 | ProteinID:CAB81488.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004630 | GO:GO:0005488 |
| GO:GO:0005509 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 |
| GO:GO:0005886 | GO:GO:0006629 | GO:GO:0006950 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008219 | GO:GO:0009056 | GO:GO:0009409 | GO:GO:0009506 | GO:GO:0009628 |
| GO:GO:0009719 | GO:GO:0009789 | GO:GO:0009987 | GO:GO:0012501 | GO:GO:0016020 | GO:GO:0016042 |
| GO:GO:0016787 | GO:GO:0046470 | GO:GO:0046473 | GO:GO:0070290 | GO:GO:0090333 | InterPro:IPR000008 |
| InterPro:IPR001736 | RefSeq:NP_567989.1 | RefSeq:NP_849501.1 | PFAM:PF00168 | PFAM:PF00614 | PFAM:PF12357 |
| PIRSF:PIRSF036470 | InterPro:PLipase_D/transphosphatidylase | InterPro:PLipase_D_C | InterPro:PLipase_D_fam | InterPro:PLipase_D_pln | PO:PO:0000005 |
| PO:PO:0000013 | PO:PO:0000035 | PO:PO:0000036 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0005052 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 |
| PO:PO:0025256 | PO:PO:0025257 | PO:PO:0025281 | PFscan:PS50004 | PFscan:PS50035 | PANTHER:PTHR18896 |
| PANTHER:PTHR18896:SF86 | UniProt:Q9C5Y0 | SMART:SM00155 | SMART:SM00239 | SUPFAM:SSF49562 | SUPFAM:SSF56024 |
| UniParc:UPI000013149F | SEG:seg | : | : | : | : |
Description
PLDDELTAPhospholipase D delta [Source:UniProtKB/Swiss-Prot;Acc:Q9C5Y0]
Coordinates
chr4:-:16955518..16960170
Molecular Weight (calculated)
98922.3 Da
IEP (calculated)
7.174
GRAVY (calculated)
-0.403
Length
868 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEKVSEDVM LLHGDLDLKI VKARRLPNMD MFSEHLRRLF TACNACARPT DTDDVDPRDK GEFGDKNIRS HRKVITSDPY VTVVVPQATL ARTRVLKNSQ
101: EPLWDEKFNI SIAHPFAYLE FQVKDDDVFG AQIIGTAKIP VRDIASGERI SGWFPVLGAS GKPPKAETAI FIDMKFTPFD QIHSYRCGIA GDPERRGVRR
201: TYFPVRKGSQ VRLYQDAHVM DGTLPAIGLD NGKVYEHGKC WEDICYAISE AHHMIYIVGW SIFHKIKLVR ETKVPRDKDM TLGELLKYKS QEGVRVLLLV
301: WDDKTSHDKF GIKTPGVMGT HDEETRKFFK HSSVICVLSP RYASSKLGLF KQQASPSSSI YIMTVVGTLF THHQKCVLVD TQAVGNNRKV TAFIGGLDLC
401: DGRYDTPEHR ILHDLDTVFK DDFHNPTFPA GTKAPRQPWH DLHCRIDGPA AYDVLINFEQ RWRKATRWKE FSLRLKGKTH WQDDALIRIG RISWILSPVF
501: KFLKDGTSII PEDDPCVWVS KEDDPENWHV QIFRSIDSGS VKGFPKYEDE AEAQHLECAK RLVVDKSIQT AYIQTIRSAQ HFIYIENQYF LGSSYAWPSY
601: RDAGADNLIP MELALKIVSK IRAKERFAVY VVIPLWPEGD PKSGPVQEIL YWQSQTMQMM YDVIAKELKA VQSDAHPLDY LNFYCLGKRE QLPDDMPATN
701: GSVVSDSYNF QRFMIYVHAK GMIVDDEYVL MGSANINQRS MAGTKDTEIA MGAYQPNHTW AHKGRHPRGQ VYGYRMSLWA EHLGKTGDEF VEPSDLECLK
801: KVNTISEENW KRFIDPKFSE LQGHLIKYPL QVDVDGKVSP LPDYETFPDV GGKIIGAHSM ALPDTLTT
101: EPLWDEKFNI SIAHPFAYLE FQVKDDDVFG AQIIGTAKIP VRDIASGERI SGWFPVLGAS GKPPKAETAI FIDMKFTPFD QIHSYRCGIA GDPERRGVRR
201: TYFPVRKGSQ VRLYQDAHVM DGTLPAIGLD NGKVYEHGKC WEDICYAISE AHHMIYIVGW SIFHKIKLVR ETKVPRDKDM TLGELLKYKS QEGVRVLLLV
301: WDDKTSHDKF GIKTPGVMGT HDEETRKFFK HSSVICVLSP RYASSKLGLF KQQASPSSSI YIMTVVGTLF THHQKCVLVD TQAVGNNRKV TAFIGGLDLC
401: DGRYDTPEHR ILHDLDTVFK DDFHNPTFPA GTKAPRQPWH DLHCRIDGPA AYDVLINFEQ RWRKATRWKE FSLRLKGKTH WQDDALIRIG RISWILSPVF
501: KFLKDGTSII PEDDPCVWVS KEDDPENWHV QIFRSIDSGS VKGFPKYEDE AEAQHLECAK RLVVDKSIQT AYIQTIRSAQ HFIYIENQYF LGSSYAWPSY
601: RDAGADNLIP MELALKIVSK IRAKERFAVY VVIPLWPEGD PKSGPVQEIL YWQSQTMQMM YDVIAKELKA VQSDAHPLDY LNFYCLGKRE QLPDDMPATN
701: GSVVSDSYNF QRFMIYVHAK GMIVDDEYVL MGSANINQRS MAGTKDTEIA MGAYQPNHTW AHKGRHPRGQ VYGYRMSLWA EHLGKTGDEF VEPSDLECLK
801: KVNTISEENW KRFIDPKFSE LQGHLIKYPL QVDVDGKVSP LPDYETFPDV GGKIIGAHSM ALPDTLTT
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.