Factsheet for TraesCS6A01G071700.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

cytosol 1
mitochondrion 1
plastid 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plastid
Any Predictor:	cytosol, nucleus, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G096200.1	Wheat	cytosol	94.25	94.68
HORVU6Hr1G012780.6	Barley	cytosol, nucleus, plastid	93.44	93.44
OQU84227	Sorghum	cytosol	65.59	62.02
Zm00001d015033_P001	Maize	extracellular, plastid, vacuole	64.9	60.58
PGSC0003DMT400009253	Potato	cytosol	16.46	54.79
Bra034939.1-P	Field mustard	cytosol	47.99	50.06
PGSC0003DMT400025590	Potato	cytosol	46.61	49.94
KRH60977	Soybean	cytosol	48.56	49.82
Solyc04g082000.2.1	Tomato	cytosol	48.1	49.82
KRH51648	Soybean	cytosol	48.45	49.7
TraesCS5A01G337100.2	Wheat	cytosol	49.14	49.54
GSMUA_Achr11P...	Banana	cytosol	47.18	49.28
Solyc02g061850.2.1	Tomato	cytosol	47.64	48.71
VIT_18s0001g00770.t01	Wine grape	nucleus	48.91	48.57
AT4G35790.1	Thale cress	cytosol	48.33	48.39
Solyc02g083340.2.1	Tomato	nucleus	48.22	48.38
Bra017730.1-P	Field mustard	cytosol	46.49	48.15
CDX72557	Canola	cytosol	47.87	48.09
VIT_00s0264g00100.t01	Wine grape	cytosol	48.1	47.88
CDY35793	Canola	cytosol	47.64	47.86
Bra010512.1-P	Field mustard	cytosol	44.07	47.46
KRH76589	Soybean	extracellular	47.18	47.45
CDY47037	Canola	cytosol	48.1	47.23
KRH28860	Soybean	mitochondrion	47.07	47.23
CDY41630	Canola	cytosol	46.72	46.83
CDY67335	Canola	cytosol	46.61	46.77
TraesCS5A01G202000.1	Wheat	cytosol	44.88	46.48
TraesCS1A01G365100.2	Wheat	mitochondrion	43.38	45.53
TraesCS4A01G347800.3	Wheat	cytosol, nucleus, peroxisome	33.83	45.44
PGSC0003DMT400009250	Potato	cytosol	28.65	45.03
TraesCS5A01G520900.1	Wheat	cytosol	41.77	43.68
CDX80734	Canola	cytosol	5.98	42.98
TraesCS4A01G338500.1	Wheat	cytosol	6.33	42.97
KRH37270	Soybean	cytosol	12.43	41.06
TraesCS1A01G115300.1	Wheat	cytosol	37.05	39.51
TraesCS3A01G130000.1	Wheat	plastid	36.71	39.29
TraesCS7A01G376500.3	Wheat	cytosol	36.59	38.78
TraesCS1A01G373100.2	Wheat	plastid	36.25	37.82
TraesCS5A01G223500.1	Wheat	cytosol	34.41	36.2
TraesCS7A01G545000.1	Wheat	cytosol	34.18	35.96
TraesCS7A01G544900.1	Wheat	cytosol	31.88	35.79
TraesCS1A01G187400.1	Wheat	peroxisome	42.81	33.6
Os02t0120200-01	Rice	extracellular	33.37	31.87
CDY42882	Canola	nucleus	11.28	30.43
TraesCS1A01G228300.1	Wheat	cytosol, nucleus, peroxisome	20.25	15.81

Protein Annotations

KEGG:00564+3.1.4.4	KEGG:00565+3.1.4.4	Gene3D:3.30.870.10	MapMan:50.3.1	InterPro:C2_dom	ncoils:Coil
GO:GO:0003674	GO:GO:0003824	GO:GO:0004630	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575
GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016787
GO:GO:0046470	InterPro:IPR000008	InterPro:IPR001736	PFAM:PF00168	PFAM:PF00614	PFAM:PF12357
PIRSF:PIRSF036470	InterPro:PLipase_D/transphosphatidylase	InterPro:PLipase_D_C	InterPro:PLipase_D_fam	InterPro:PLipase_D_pln	PFscan:PS50035
PANTHER:PTHR18896	PANTHER:PTHR18896:SF70	SMART:SM00155	SMART:SM00239	SUPFAM:SSF49562	SUPFAM:SSF56024
EnsemblPlantsGene:TraesCS6A01G071700	EnsemblPlants:TraesCS6A01G071700.1	TIGR:cd04015	SEG:seg	:	:

Description

No Description!

Coordinates

chr6A:-:39171626..39177241

Molecular Weight (calculated)

96158.6 Da

IEP (calculated)

7.933

GRAVY (calculated)

-0.378

Length

869 amino acids

Sequence
(BLAST)

001: MSSMADDGER LELLHGDLDL TIHEACGLPN MDVLSTILRR LCIRPRRLPS RNIDADTDAD SPLRRRRRRR RQKPRGRHSI VPTSDPYAVV AVSGPDGPDT
101: TLARTYVVRN SEAPDWSARI RIPLAHEASR LVLQVRDSDP FGSDLIGFAT LPAATLLDGK PIADAWLPLL RPDGRGPPKP NSAIRVSLTF TPASSSPSRR
201: RRFGGVPAYF PARRGCELKL YQDAHVAVGA PCSYERGRCW EDVCMAVLGA QKLVYVAGWA VGARVRLLRE EMSPEMAEKA AEVRALAGVE VEKMALGDLL
301: KYKSQEGVRV CLLVSDHHDT PLHPSFFLNT GGMMQTSGED TKKFFKQSSV ICVLSHRYPR SKVDMAKQKV VGTPYAHNQK SILVDTPASE ATRRITAFLG
401: GLDLAAGRYD TPAHRLFGDL DTVFRGDIHN PTLGDAAGEN GPRLPWHDMH CRLDGAAAYD VLKNFEQRWR RATAKHLKAS KHGKDDALLK LQRIPWILSP
501: VVADGEDDAL RVLPEDDPRC WHAQVFRSVD AGSVKGFPRS WETEEMEARH LLCDKSLAVE QSIHAAYVAA IRAADRFVYL ETERFLGSSY AWPAPFRHPG
601: AGNLVPMEIA LKAASKIRAG EDFAAYVVLP MWPAAEGPPG SAPAQEALFW QGKTMQAMYE VVASAIVEAG ASGRAHPQDY LNFYCLGNRE QAPADLYGRA
701: AETGTSPAAL ARRHGRFMVY VHSKGMVVDD EYVLLGSANV NQRSLSGSRD TEIAVGAHQP HHTGRRPRGQ VHRYRMSLWE EHLGGLAEVL KAPESPECVR
801: LVNQVARENW DRYTDEGEVV ETMQGHLMKY PVEVDHDGSV WPLTGHEFFP DVGGRVLGST NKFPDHLTM

Best Arabidopsis Sequence Match ( AT2G42010.1 )
(BLAST)

0001: MDNHGPRYPY PYGQYPYPYP YPAPYRPPSS EPYPPPPTNQ YSAPYYPYPP PPYATPPPYA SPPPPHQHTS GSHSGPLDYS HNPQPSSLAA APPEYHRHSF
0101: DYQPSPYPYQ PQGNFGAYGP PPPHYSYQEP AQYPPPETKP QEPLPPPQQT QGFQEYRRQD CLSTGGTGHD NVSNSGSSYP PVDELLGGLH ISTNQPGPSV
0201: PQLSSLPSNS WQSRPGDLYG YPNSSFPSNS HLPQLGRVDS SSSYYASTES PHSADMQMTL FGKGSLKVLL LHGNLDIWIY HAKNLPNMDM FHKTLGDMFG
0301: RLPGKIEGQL TSKITSDPYV SVSVAGAVIG RTYVMSNSEN PVWMQHFYVP VAHHAAEVHF VVKDSDVVGS QLIGLVTIPV EQIYSGAKIE GTYPILNSNG
0401: KPCKPGANLS LSIQYTPMDK LSVYHHGVGA GPDYQGVPGT YFPLRKGGTV RLYQDAHVPE GMLPGIRLDN GMSYEHGKCW HDMFDAIRQA RRLIYITGWS
0501: VWHKVKLIRD KLGPASECTL GELLRSKSQE GVRVLLLIWD DPTSRSILGY KTDGVMATHD EETRRFFKHS SVQVLLCPRN AGKRHSWVKQ REVGTIYTHH
0601: QKNVIVDADA GGNRRKIIAF VGGLDLCDGR YDTPQHPLFR TLQTIHKDDF HNPTFTGNLS GCPREPWHDL HSKIDGPAAY DVLTNFEERW LKAAKPSGIK
0701: KFKTSYDDAL LRIDRIPDIL GVSDTPTVSE NDPEAWHVQI FRSIDSNSVK GFPKDPKDAT CKNLVCGKNV LIDMSIHTAY VKAIRAAQHF IYIENQYFIG
0801: SSYNWNAHKD IGANNLIPME IALKIAEKIR ANERFAAYIV IPMWPEGVPT GAATQRILYW QHKTIQMMYE TIYKALVETG LEGAFSPQDY LNFFCLGNRE
0901: MVDGIDNSGT GSPSNANTPQ ALSRKSRRFM VYVHSKGMVV DDEYVVIGSA NINQRSMEGT RDTEIAMGAY QPQHTWARKH SGPRGQIYGY RMSLWAEHMA
1001: TLDDCFTQPE SIECVRKVRT MGERNWKQFA AEEVSDMRGH LLKYPVEVDR KGKVRPLPGS ETFPDVGGNI VGSFIAIQEN LTI

Arabidopsis Description

PLDBETA1phospholipase D beta 1 [Source:TAIR;Acc:AT2G42010]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.