Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- peroxisome 1
- mitochondrion 1
- nucleus 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G230100.1 | Wheat | cytosol, nucleus, peroxisome | 98.47 | 96.91 |
| TraesCS1B01G242500.1 | Wheat | cytosol, nucleus, peroxisome | 98.02 | 96.46 |
| HORVU1Hr1G059050.25 | Barley | plastid | 94.34 | 90.28 |
| OQU77834 | Sorghum | endoplasmic reticulum, golgi | 53.64 | 86.65 |
| Zm00001d037946_P001 | Maize | cytosol, mitochondrion, nucleus, peroxisome | 84.64 | 81.28 |
| OQU77836 | Sorghum | cytosol | 33.15 | 77.04 |
| GSMUA_Achr2P00290_001 | Banana | endoplasmic reticulum | 25.43 | 75.67 |
| KRH16190 | Soybean | cytosol | 7.46 | 72.17 |
| CDX92096 | Canola | nucleus | 66.22 | 68.11 |
| CDX95904 | Canola | cytosol, nucleus, peroxisome | 66.22 | 67.74 |
| Solyc01g065720.2.1 | Tomato | cytosol | 66.85 | 67.27 |
| VIT_05s0077g01830.t01 | Wine grape | cytosol | 66.76 | 66.82 |
| Bra022178.1-P | Field mustard | cytosol, nucleus, peroxisome | 64.15 | 66.6 |
| KRH12101 | Soybean | plastid | 66.58 | 65.98 |
| KRH37058 | Soybean | plastid | 66.4 | 65.63 |
| AT3G16785.4 | Thale cress | plastid | 66.22 | 64.71 |
| Solyc01g100020.2.1 | Tomato | cytosol, nucleus, peroxisome | 59.57 | 63.02 |
| AT3G05630.1 | Thale cress | cytosol | 57.23 | 60.9 |
| Bra040531.1-P | Field mustard | cytosol, nucleus, peroxisome | 56.06 | 59.6 |
| CDY18811 | Canola | cytosol, nucleus, peroxisome | 56.06 | 59.6 |
| Os05t0358700-01 | Rice | cytosol, plasma membrane | 9.25 | 59.2 |
| KRG92923 | Soybean | cytosol, nucleus, peroxisome | 59.03 | 58.66 |
| KRH05308 | Soybean | endoplasmic reticulum | 9.52 | 53.81 |
| CDY51604 | Canola | cytosol | 13.48 | 53.19 |
| TraesCS4A01G338500.1 | Wheat | cytosol | 3.05 | 26.56 |
| TraesCS3A01G130000.1 | Wheat | plastid | 17.97 | 24.63 |
| TraesCS7A01G376500.3 | Wheat | cytosol | 17.88 | 24.27 |
| TraesCS1A01G115300.1 | Wheat | cytosol | 17.7 | 24.17 |
| TraesCS5A01G202000.1 | Wheat | cytosol | 17.52 | 23.24 |
| TraesCS4A01G347800.3 | Wheat | cytosol, nucleus, peroxisome | 13.39 | 23.03 |
| TraesCS5A01G223500.1 | Wheat | cytosol | 16.98 | 22.88 |
| TraesCS1A01G365100.2 | Wheat | mitochondrion | 16.89 | 22.71 |
| TraesCS5A01G520900.1 | Wheat | cytosol | 16.62 | 22.26 |
| TraesCS1A01G373100.2 | Wheat | plastid | 16.62 | 22.21 |
| TraesCS5A01G337100.2 | Wheat | cytosol | 16.98 | 21.93 |
| TraesCS7A01G544900.1 | Wheat | cytosol | 15.09 | 21.71 |
| TraesCS7A01G545000.1 | Wheat | cytosol | 16.08 | 21.67 |
| TraesCS6A01G071700.1 | Wheat | cytosol, nucleus, plastid | 15.81 | 20.25 |
| TraesCS1A01G187400.1 | Wheat | peroxisome | 17.16 | 17.25 |
Protein Annotations
| KEGG:00564+3.1.4.4 | KEGG:00565+3.1.4.4 | Gene3D:2.30.29.30 | Gene3D:3.30.870.10 | MapMan:5.7.2.4.5 | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004630 | GO:GO:0006629 | GO:GO:0006654 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016787 |
| GO:GO:0048017 | InterPro:IPR001736 | InterPro:IPR001849 | InterPro:IPR011993 | PFAM:PF00169 | PFAM:PF00614 |
| PFAM:PF13091 | InterPro:PH-like_dom_sf | InterPro:PH_domain | PIRSF:PIRSF009376 | InterPro:PLD-like_dom | InterPro:PLipase_D/transphosphatidylase |
| InterPro:PLipase_D_euk | InterPro:PLipase_D_fam | PFscan:PS50003 | PFscan:PS50035 | PANTHER:PTHR18896 | PANTHER:PTHR18896:SF87 |
| SMART:SM00155 | SMART:SM00233 | SUPFAM:SSF50729 | SUPFAM:SSF56024 | EnsemblPlantsGene:TraesCS1A01G228300 | EnsemblPlants:TraesCS1A01G228300.1 |
| TIGR:cd01254 | TIGR:cd09138 | TIGR:cd09141 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr1A:-:399491593..399508030
Molecular Weight (calculated)
126755.0 Da
IEP (calculated)
7.441
GRAVY (calculated)
-0.464
Length
1113 amino acids
Sequence
(BLAST)
(BLAST)
0001: MNMERLPAER HGHRYERMQP EPAAEGDASA SSSSSPSAPA RRPEVLAASA SFRLSEATRI KYRCVICGLN NVHYFYQFRW RLFKKASQVL YLHFALKRRE
0101: FLEEFHEKQE QVKEWLQNLG IGDHMPVVHD EDEVDDVNVP SQPDESSIRN RNVPSIAVLP VIRPALGRQH SISDRAKVAM QEYLNHFFGN LDIVNSREVC
0201: KFLEVSCLSF LPEYGPKLKE DYVSIGHLPK IQKGHKEKCC SCGLFSCCKS SWQKVWVVLK PGFLALLKDP FDPKLLDVII FDALPHMDIN GEGQISLAKE
0301: IKERNPLHFG FQVSSGGRTI KLRTKSSSKV KDWVTAINAA RQPPEGWCYP HRFGSFAPPR GLLEDGSMAQ WFIDGQAGFE AIASSIEHAK SEIFIAGWWL
0401: CPELYLRRPF EHHGSSRLDA LLEARAKQGV QIYILMYKEV ALALKINSLY SKNRLLNIHE NVKVLRYPDH FSSGVYLWSH HEKIVIVDNQ VCYIGGLDLC
0501: FGRYDSPDHK VTDVPSTIWP GKDYYNPRES EPNSWEDSAK DELDRTKYPR MPWHDVQCAL YGPPCRDVAR HFVQRWNYSK RNKAPNEQAI PLLMPHHHMV
0601: IPHYKGRSKE ANGEAEGKQN HDENADVKKT ASLASSASSQ DVPLLLPQEL EPQALPDGDL AMTGFDINQA DNANKTGFKQ PLLNRKAKFD ASRQDLPMRG
0701: FVDNLSSPES ATIRRFDSPK EDRHHMDKKW WERQEQGDQV ASVLDIGQVG PRATCRCQVI RSVGQWSAGT TQIEGSIHNA YFSLIEKAEH FVYIENQFFI
0801: SGLSGDDTIK NRVLEALYRR ILRAEREKKR FKAIIVIPLL PGFQGGIDDG GAASVRAIMH WQYRTICRGP NSILQNLYDV IGLKAHDYIS FHGLRAHGRL
0901: TDGGPVVTSQ IYVHSKLMII DDRIALIGSA NINDRSLLGS RDSEIAVVIE DKEVVNSKMD GRHWEAGKFS LSLRLSLWAE HLGLHRGEVS HIMDPMDDTT
1001: FKNIWMATAK TNTTIFQDVF SCVPNDLIHS RTQFRQSIAY WKEKIGHTTI DLGVAQEKLE TYQDGDLKGA DPMERLQLVR GHLVSFPLDF MCQEDLRPYF
1101: SESEYYTSPQ VFH
0101: FLEEFHEKQE QVKEWLQNLG IGDHMPVVHD EDEVDDVNVP SQPDESSIRN RNVPSIAVLP VIRPALGRQH SISDRAKVAM QEYLNHFFGN LDIVNSREVC
0201: KFLEVSCLSF LPEYGPKLKE DYVSIGHLPK IQKGHKEKCC SCGLFSCCKS SWQKVWVVLK PGFLALLKDP FDPKLLDVII FDALPHMDIN GEGQISLAKE
0301: IKERNPLHFG FQVSSGGRTI KLRTKSSSKV KDWVTAINAA RQPPEGWCYP HRFGSFAPPR GLLEDGSMAQ WFIDGQAGFE AIASSIEHAK SEIFIAGWWL
0401: CPELYLRRPF EHHGSSRLDA LLEARAKQGV QIYILMYKEV ALALKINSLY SKNRLLNIHE NVKVLRYPDH FSSGVYLWSH HEKIVIVDNQ VCYIGGLDLC
0501: FGRYDSPDHK VTDVPSTIWP GKDYYNPRES EPNSWEDSAK DELDRTKYPR MPWHDVQCAL YGPPCRDVAR HFVQRWNYSK RNKAPNEQAI PLLMPHHHMV
0601: IPHYKGRSKE ANGEAEGKQN HDENADVKKT ASLASSASSQ DVPLLLPQEL EPQALPDGDL AMTGFDINQA DNANKTGFKQ PLLNRKAKFD ASRQDLPMRG
0701: FVDNLSSPES ATIRRFDSPK EDRHHMDKKW WERQEQGDQV ASVLDIGQVG PRATCRCQVI RSVGQWSAGT TQIEGSIHNA YFSLIEKAEH FVYIENQFFI
0801: SGLSGDDTIK NRVLEALYRR ILRAEREKKR FKAIIVIPLL PGFQGGIDDG GAASVRAIMH WQYRTICRGP NSILQNLYDV IGLKAHDYIS FHGLRAHGRL
0901: TDGGPVVTSQ IYVHSKLMII DDRIALIGSA NINDRSLLGS RDSEIAVVIE DKEVVNSKMD GRHWEAGKFS LSLRLSLWAE HLGLHRGEVS HIMDPMDDTT
1001: FKNIWMATAK TNTTIFQDVF SCVPNDLIHS RTQFRQSIAY WKEKIGHTTI DLGVAQEKLE TYQDGDLKGA DPMERLQLVR GHLVSFPLDF MCQEDLRPYF
1101: SESEYYTSPQ VFH
0001: MASEQLMSPA SGGGRYFQMQ PEQFPSMVSS LFSFAPAPTQ ETNRIFEELP KAVIVSVSRP DAGDISPVLL SYTIECQYKQ FKWQLVKKAS QVFYLHFALK
0101: KRAFIEEIHE KQEQVKEWLQ NLGIGDHPPV VQDEDADEVP LHQDESAKNR DVPSSAALPV IRPLGRQQSI SVRGKHAMQE YLNHFLGNLD IVNSREVCRF
0201: LEVSMLSFSP EYGPKLKEDY IMVKHLPKFS KSDDDSNRCC GCCWFCCCND NWQKVWGVLK PGFLALLEDP FDAKLLDIIV FDVLPVSNGN DGVDISLAVE
0301: LKDHNPLRHA FKVTSGNRSI RIRAKNSAKV KDWVASINDA ALRPPEGWCH PHRFGSYAPP RGLTDDGSQA QWFVDGGAAF AAIAAAIENA KSEIFICGWW
0401: VCPELYLRRP FDPHTSSRLD NLLENKAKQG VQIYILIYKE VALALKINSV YSKRRLLGIH ENVRVLRYPD HFSSGVYLWS HHEKLVIVDN QVCFIGGLDL
0501: CFGRYDTFEH KVGDNPSVTW PGKDYYNPRE SEPNTWEDAL KDELERKKHP RMPWHDVHCA LWGPPCRDVA RHFVQRWNYA KRNKAPYEDS IPLLMPQHHM
0601: VIPHYMGRQE ESDIESKKEE DSIRGIRRDD SFSSRSSLQD IPLLLPHEPV DQDGSSGGHK ENGTNNRNGP FSFRKSKIEP VDGDTPMRGF VDDRNGLDLP
0701: VAKRGSNAID SEWWETQDHD YQVGSPDETG QVGPRTSCRC QIIRSVSQWS AGTSQVEESI HSAYRSLIDK AEHFIYIENQ FFISGLSGDD TVKNRVLEAL
0801: YKRILRAHNE KKIFRVVVVI PLLPGFQGGI DDSGAASVRA IMHWQYRTIY RGHNSILTNL YNTIGVKAHD YISFYGLRAY GKLSEDGPVA TSQVYVHSKI
0901: MIVDDRAALI GSANINDRSL LGSRDSEIGV LIEDTELVDS RMAGKPWKAG KFSSSLRLSL WSEHLGLRTG EIDQIIDPVS DSTYKEIWMA TAKTNTMIYQ
1001: DVFSCVPNDL IHSRMAFRQS LSYWKEKLGH TTIDLGIAPE KLESYHNGDI KRSDPMDRLK AIKGHLVSFP LDFMCKEDLR PVFNESEYYA SPQVFH
0101: KRAFIEEIHE KQEQVKEWLQ NLGIGDHPPV VQDEDADEVP LHQDESAKNR DVPSSAALPV IRPLGRQQSI SVRGKHAMQE YLNHFLGNLD IVNSREVCRF
0201: LEVSMLSFSP EYGPKLKEDY IMVKHLPKFS KSDDDSNRCC GCCWFCCCND NWQKVWGVLK PGFLALLEDP FDAKLLDIIV FDVLPVSNGN DGVDISLAVE
0301: LKDHNPLRHA FKVTSGNRSI RIRAKNSAKV KDWVASINDA ALRPPEGWCH PHRFGSYAPP RGLTDDGSQA QWFVDGGAAF AAIAAAIENA KSEIFICGWW
0401: VCPELYLRRP FDPHTSSRLD NLLENKAKQG VQIYILIYKE VALALKINSV YSKRRLLGIH ENVRVLRYPD HFSSGVYLWS HHEKLVIVDN QVCFIGGLDL
0501: CFGRYDTFEH KVGDNPSVTW PGKDYYNPRE SEPNTWEDAL KDELERKKHP RMPWHDVHCA LWGPPCRDVA RHFVQRWNYA KRNKAPYEDS IPLLMPQHHM
0601: VIPHYMGRQE ESDIESKKEE DSIRGIRRDD SFSSRSSLQD IPLLLPHEPV DQDGSSGGHK ENGTNNRNGP FSFRKSKIEP VDGDTPMRGF VDDRNGLDLP
0701: VAKRGSNAID SEWWETQDHD YQVGSPDETG QVGPRTSCRC QIIRSVSQWS AGTSQVEESI HSAYRSLIDK AEHFIYIENQ FFISGLSGDD TVKNRVLEAL
0801: YKRILRAHNE KKIFRVVVVI PLLPGFQGGI DDSGAASVRA IMHWQYRTIY RGHNSILTNL YNTIGVKAHD YISFYGLRAY GKLSEDGPVA TSQVYVHSKI
0901: MIVDDRAALI GSANINDRSL LGSRDSEIGV LIEDTELVDS RMAGKPWKAG KFSSSLRLSL WSEHLGLRTG EIDQIIDPVS DSTYKEIWMA TAKTNTMIYQ
1001: DVFSCVPNDL IHSRMAFRQS LSYWKEKLGH TTIDLGIAPE KLESYHNGDI KRSDPMDRLK AIKGHLVSFP LDFMCKEDLR PVFNESEYYA SPQVFH
Arabidopsis Description
PLDP1Phospholipase D P1 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LQ40]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.