Factsheet for GSMUA_Achr2P00290_001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

nucleus 1
cytosol 1
mitochondrion 1
peroxisome 1
plastid 2
vacuole 4
extracellular 3
endoplasmic reticulum 4
plasma membrane 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
iPSORT:	mitochondrion
MultiLoc:	peroxisome
Plant-mPloc:	plastid, vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	mitochondrion	30.48	64.77
OQU77834	Sorghum	endoplasmic reticulum, golgi	73.8	40.06
GSMUA_Achr10P...	Banana	cytosol, nucleus, peroxisome	12.57	27.17
GSMUA_Achr9P16530_001	Banana	cytosol, nucleus, peroxisome	75.4	26.68
GSMUA_Achr9P21120_001	Banana	nucleus	17.38	25.79
TraesCS1A01G228300.1	Wheat	cytosol, nucleus, peroxisome	75.67	25.43
TraesCS1B01G242500.1	Wheat	cytosol, nucleus, peroxisome	76.2	25.2
TraesCS1D01G230100.1	Wheat	cytosol, nucleus, peroxisome	75.67	25.02
KXG32384	Sorghum	cytosol, nucleus, peroxisome	74.06	24.71
HORVU1Hr1G059050.25	Barley	plastid	75.4	24.25
Zm00001d037946_P001	Maize	cytosol, mitochondrion, nucleus, peroxisome	74.6	24.07
GSMUA_Achr10P...	Banana	cytosol, nucleus, peroxisome	23.53	22.06
Zm00001d009075_P001	Maize	cytosol, nucleus, peroxisome	44.12	17.39
GSMUA_Achr7P10170_001	Banana	cytosol	19.25	13.33
GSMUA_Achr1P14590_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	19.52	13.08
GSMUA_Achr1P07360_001	Banana	cytosol	24.33	12.43
GSMUA_Achr1P14920_001	Banana	plastid	25.13	11.84
GSMUA_Achr8P12030_001	Banana	plastid	25.13	11.69
GSMUA_Achr7P23470_001	Banana	cytosol	24.6	11.69
GSMUA_Achr11P...	Banana	cytosol	24.33	10.94
GSMUA_AchrUn_...	Banana	cytosol	24.87	10.84
GSMUA_Achr4P24890_001	Banana	cytosol, plastid	23.26	9.83
GSMUA_Achr6P35870_001	Banana	plasma membrane	22.46	8.83
GSMUA_Achr5P20150_001	Banana	cytosol	23.26	8.73
GSMUA_Achr10P...	Banana	cytosol, plastid	9.36	7.66
GSMUA_Achr9P21110_001	Banana	mitochondrion	9.63	5.71
GSMUA_Achr2P00270_001	Banana	cytosol, nucleus, peroxisome	5.61	2.59
OQU77836	Sorghum	cytosol	1.6	1.25
GSMUA_Achr11P...	Banana	cytosol	0.53	0.84
GSMUA_Achr10P...	Banana	cytosol	0.27	0.33
Os05t0358700-01	Rice	cytosol, plasma membrane	0.0	0.0

Protein Annotations

EnsemblPlants:GSMUA_Achr2P00290_001	EnsemblPlants:GSMUA_Achr2T00290_001	EnsemblPlantsGene:GSMUA_Achr2G00290_001	Gene3D:3.30.870.10	GO:GO:0003674	GO:GO:0003824
InterPro:IPR001736	InterPro:PLD-like_dom	InterPro:PLipase_D/transphosphatidylase	InterPro:PLipase_D_fam	KEGG:00564+3.1.4.4	KEGG:00565+3.1.4.4
PANTHER:PTHR18896	PANTHER:PTHR18896:SF111	PFAM:PF13091	PFscan:PS50035	SignalP:SignalP-noTM	SMART:SM00155
SUPFAM:SSF56024	UniParc:UPI000296F9D0	UniProt:M0S3X0	MapMan:5.7.2.4.5	:	:

Description

Phospholipase D p1 [Source:GMGC_GENE;Acc:GSMUA_Achr2G00290_001]

Coordinates

chr2:+:1857447..1879559

Molecular Weight (calculated)

42790.3 Da

IEP (calculated)

7.019

GRAVY (calculated)

-0.199

Length

374 amino acids

Sequence
(BLAST)

001: MACRFHCLHN FFLWMLYYNV LRSVGQWSAG TSQTEESIHN AYTSLIEKAE HFIYIENQFF ISGLSGDVII RNRVLEALCQ RIMRAEKEKK CFRVIIIIPL
101: LPGFQGGIDD GGAASVRAIM HWQYRTICRG PNSILQNLYD IMGPKVHEFI SFYGLRSYGR LCDGGHLVTN QIYVHSKLMI VDDRVALVGS ANINDRSLLG
201: SRDSEIGVLI EDKEFVESYM NGNPWKAGKF SLSLRLSLWQ EHLGLRAEEI SQIRDPVTNA TYRDIWTATA KTNTMIYQDV FSCVPSDLIH SRAAFRQNTN
301: IWKEKLGHTT IDLGITPEKL ETYQNGNVKH TDPMERLQSI RGHLVSFPLD FMCNEDLRPG FSEGEFYASS QVFH

Best Arabidopsis Sequence Match ( AT3G16785.1 )
(BLAST)

0001: MASEQLMSPA SGGGRYFQMQ PEQFPSMVSS LFSFAPAPTQ ETNRIFEELP KAVIVSVSRP DAGDISPVLL SYTIECQYKQ FKWQLVKKAS QVFYLHFALK
0101: KRAFIEEIHE KQEQVKEWLQ NLGIGDHPPV VQDEDADEVP LHQDESAKNR DVPSSAALPV IRPLGRQQSI SVRGKHAMQE YLNHFLGNLD IVNSREVCRF
0201: LEVSMLSFSP EYGPKLKEDY IMVKHLPKFS KSDDDSNRCC GCCWFCCCND NWQKVWGVLK PGFLALLEDP FDAKLLDIIV FDVLPVSNGN DGVDISLAVE
0301: LKDHNPLRHA FKVTSGNRSI RIRAKNSAKV KDWVASINDA ALRPPEGWCH PHRFGSYAPP RGLTDDGSQA QWFVDGGAAF AAIAAAIENA KSEIFICGWW
0401: VCPELYLRRP FDPHTSSRLD NLLENKAKQG VQIYILIYKE VALALKINSV YSKRRLLGIH ENVRVLRYPD HFSSGVYLWS HHEKLVIVDN QVCFIGGLDL
0501: CFGRYDTFEH KVGDNPSVTW PGKDYYNPRE SEPNTWEDAL KDELERKKHP RMPWHDVHCA LWGPPCRDVA RHFVQRWNYA KRNKAPYEDS IPLLMPQHHM
0601: VIPHYMGRQE ESDIESKKEE DSIRGIRRDD SFSSRSSLQD IPLLLPHEPV DQDGSSGGHK ENGTNNRNGP FSFRKSKIEP VDGDTPMRGF VDDRNGLDLP
0701: VAKRGSNAID SEWWETQDHD YQVGSPDETG QVGPRTSCRC QIIRSVSQWS AGTSQVEESI HSAYRSLIDK AEHFIYIENQ FFISGLSGDD TVKNRVLEAL
0801: YKRILRAHNE KKIFRVVVVI PLLPGFQGGI DDSGAASVRA IMHWQYRTIY RGHNSILTNL YNTIGVKAHD YISFYGLRAY GKLSEDGPVA TSQVYVHSKI
0901: MIVDDRAALI GSANINDRSL LGSRDSEIGV LIEDTELVDS RMAGKPWKAG KFSSSLRLSL WSEHLGLRTG EIDQIIDPVS DSTYKEIWMA TAKTNTMIYQ
1001: DVFSCVPNDL IHSRMAFRQS LSYWKEKLGH TTIDLGIAPE KLESYHNGDI KRSDPMDRLK AIKGHLVSFP LDFMCKEDLR PVFNESEYYA SPQVFH

Arabidopsis Description

PLDP1Phospholipase D P1 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LQ40]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.