Factsheet for GSMUA_Achr9P21110_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
vacuole 1
cytosol 2
mitochondrion 3
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	cytosol	75.71	55.59
GSMUA_Achr1P07360_001	Banana	cytosol	63.65	54.78
GSMUA_Achr1P14920_001	Banana	plastid	62.54	49.62
GSMUA_Achr7P23470_001	Banana	cytosol	60.48	48.41
GSMUA_Achr11P...	Banana	cytosol	61.11	46.27
GSMUA_Achr10P...	Banana	cytosol	19.52	40.33
GSMUA_Achr8P12030_001	Banana	plastid	46.19	36.19
GSMUA_Achr4P24890_001	Banana	cytosol, plastid	47.14	33.56
GSMUA_Achr5P20150_001	Banana	cytosol	48.41	30.59
GSMUA_Achr7P10170_001	Banana	cytosol	22.38	26.11
GSMUA_Achr1P14590_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	22.7	25.63
GSMUA_Achr10P...	Banana	cytosol, plastid	16.51	22.76
GSMUA_Achr10P...	Banana	cytosol, nucleus, peroxisome	11.75	18.55
GSMUA_Achr6P35870_001	Banana	plasma membrane	25.56	16.93
GSMUA_Achr2P00270_001	Banana	cytosol, nucleus, peroxisome	15.08	11.7
GSMUA_Achr9P16530_001	Banana	cytosol, nucleus, peroxisome	17.94	10.69
GSMUA_Achr2P00290_001	Banana	endoplasmic reticulum	5.71	9.63
GSMUA_Achr11P...	Banana	cytosol	2.7	7.14
GSMUA_Achr9P21120_001	Banana	nucleus	2.54	6.35
GSMUA_Achr10P...	Banana	cytosol, nucleus, peroxisome	0.32	1.16
GSMUA_Achr11P...	Banana	mitochondrion	0.32	1.14

Protein Annotations

KEGG:00564+3.1.4.4	KEGG:00565+3.1.4.4	Gene3D:3.30.870.10	MapMan:50.3.1	InterPro:C2_dom	GO:GO:0003674
GO:GO:0003824	EnsemblPlantsGene:GSMUA_Achr9G21110_001	EnsemblPlants:GSMUA_Achr9P21110_001	EnsemblPlants:GSMUA_Achr9T21110_001	InterPro:IPR000008	InterPro:IPR001736
UniProt:M0U270	PFAM:PF00168	PFAM:PF00614	InterPro:PLipase_D/transphosphatidylase	InterPro:PLipase_D_fam	PFscan:PS50004
PFscan:PS50035	PANTHER:PTHR18896	PANTHER:PTHR18896:SF86	SMART:SM00239	SUPFAM:SSF49562	SUPFAM:SSF56024
UniParc:UPI0002959B59	SEG:seg	:	:	:	:

Description

Phospholipase D delta [Source:GMGC_GENE;Acc:GSMUA_Achr9G21110_001]

Coordinates

chr9:+:25794430..25804458

Molecular Weight (calculated)

71469.6 Da

IEP (calculated)

7.306

GRAVY (calculated)

-0.211

Length

630 amino acids

Sequence
(BLAST)

001: MFPLLFIQIR RKDFPQQNKQ NREISSYNWG NLILYQVGVG ESASAVEDVL LHGDLLLTVI EACRLPNMDY FSEHLRRCYT SCCPPIPGST ASKSGSDATQ
101: HHQNHHHRKI ITSDPYVTAS LAGATVARTR VISNSEDPAW NEHFNIPVAH RASTLELQVK DNDVFGAQLI GIVSIPTARI AAGKKIQDWF PIIAGDPEQL
201: GVRNTYFPLR KGGSVTLYQD AHVLDDELPE VTLEKGAVFK HEKCWEDICH AILEAHHLIY LVGWSIYHKV KLVREPTRPL PDAGKLTLGD LLKYKSQEGV
301: RVCMLVWDDK TSHDKLFIKT GGVMQTHDEE TKKFFKHSSV ICVLSPRYAS SKLSIIISSS ISPSEIVLIL LIIVVGTLFT HHQKCVLVDT QASGNMRKIT
401: AFIGGLDLCD GRYDTPEHRL FRDLDTTFLN DFHNPTFAAG IKAPRQPWHD LHCKIEGPAV YDILKNFEQR WRKATRWQEF SLYDDPSLWV SQQEDSEQWH
501: VQVFRSIDSG SVKGFPDNVQ EASKMNLVCR KNLVIDKSIH TAYVKAIRSA QHFIYIENQY FLGSSYGWPS YKHSGADNLI PMELALKVAS KIRANEPFAV
601: YVVIPMWPEG VPTTNAVQEI LFWQVLFYFS

Best Arabidopsis Sequence Match ( AT4G35790.3 )
(BLAST)

001: MAEKVSEDVM LLHGDLDLKI VKARRLPNMD MFSEHLRRLF TACNACARPT DTDDVDPRDK GEFGDKNIRS HRKVITSDPY VTVVVPQATL ARTRVLKNSQ
101: EPLWDEKFNI SIAHPFAYLE FQVKDDDVFG AQIIGTAKIP VRDIASGERI SGWFPVLGAS GKPPKAETAI FIDMKFTPFD QIHSYRCGIA GDPERRGVRR
201: TYFPVRKGSQ VRLYQDAHVM DGTLPAIGLD NGKVYEHGKC WEDICYAISE AHHMIYIVGW SIFHKIKLVR ETKVPRDKDM TLGELLKYKS QEGVRVLLLV
301: WDDKTSHDKF GIKTPGVMGT HDEETRKFFK HSSVICVLSP RYASSKLGLF KQQVVGTLFT HHQKCVLVDT QAVGNNRKVT AFIGGLDLCD GRYDTPEHRI
401: LHDLDTVFKD DFHNPTFPAG TKAPRQPWHD LHCRIDGPAA YDVLINFEQR WRKATRWKEF SLRLKGKTHW QDDALIRIGR ISWILSPVFK FLKDGTSIIP
501: EDDPCVWVSK EDDPENWHVQ IFRSIDSGSV KGFPKYEDEA EAQHLECAKR LVVDKSIQTA YIQTIRSAQH FIYIENQYFL GSSYAWPSYR DAGADNLIPM
601: ELALKIVSKI RAKERFAVYV VIPLWPEGDP KSGPVQEILY WQSQTMQMMY DVIAKELKAV QSDAHPLDYL NFYCLGKREQ LPDDMPATNG SVV

Arabidopsis Description

PLDDELTAPhospholipase D delta [Source:UniProtKB/Swiss-Prot;Acc:Q9C5Y0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.