Factsheet for GSMUA_Achr1P07360_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
vacuole 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P21120_001	Banana	nucleus	28.01	81.35
Zm00001d006262_P001	Maize	cytoskeleton, cytosol, peroxisome	15.71	74.68
GSMUA_AchrUn_...	Banana	cytosol	84.02	71.68
PGSC0003DMT400009253	Potato	cytosol	24.59	68.97
GSMUA_Achr1P14920_001	Banana	plastid	69.13	63.73
GSMUA_Achr9P21110_001	Banana	mitochondrion	54.78	63.65
Os09t0543100-02	Rice	plasma membrane	73.22	62.76
PGSC0003DMT400025590	Potato	cytosol	68.72	62.02
Solyc04g082000.2.1	Tomato	cytosol	70.49	61.5
GSMUA_Achr7P23470_001	Banana	cytosol	65.85	61.25
KXG36094	Sorghum	cytosol	71.58	61.0
Zm00001d006257_P009	Maize	cytosol	71.17	60.86
KRH60977	Soybean	cytosol	70.36	60.8
KRH51648	Soybean	cytosol	70.08	60.57
TraesCS5A01G337100.2	Wheat	cytosol	71.31	60.56
TraesCS5B01G336100.1	Wheat	cytosol	71.04	60.32
TraesCS5D01G341800.2	Wheat	cytosol	67.62	59.78
VIT_18s0001g00770.t01	Wine grape	nucleus	71.31	59.66
Bra034939.1-P	Field mustard	cytosol	67.35	59.18
GSMUA_Achr11P...	Banana	cytosol	67.21	59.13
KRH76589	Soybean	extracellular	69.4	58.8
VIT_00s0264g00100.t01	Wine grape	cytosol	69.4	58.19
KRH28860	Soybean	mitochondrion	68.58	57.97
Solyc02g083340.2.1	Tomato	nucleus	68.17	57.62
Solyc02g061850.2.1	Tomato	cytosol	66.53	57.29
HORVU5Hr1G084740.4	Barley	plastid	55.46	56.78
CDY35793	Canola	cytosol	66.8	56.53
Zm00001d022594_P002	Maize	cytosol	67.9	56.16
AT4G35790.1	Thale cress	cytosol	66.39	55.99
CDX72557	Canola	cytosol	65.98	55.84
Bra010512.1-P	Field mustard	cytosol	61.48	55.76
CDY67335	Canola	cytosol	65.57	55.43
Bra017730.1-P	Field mustard	cytosol	63.52	55.42
CDY41630	Canola	cytosol	65.3	55.13
CDY47037	Canola	cytosol	65.98	54.58
GSMUA_Achr10P...	Banana	cytosol, nucleus, peroxisome	12.7	53.76
PGSC0003DMT400009250	Potato	cytosol	38.8	51.36
CDX80734	Canola	cytosol	8.47	51.24
KRH37270	Soybean	cytosol	17.76	49.43
GSMUA_Achr8P12030_001	Banana	plastid	51.37	46.77
GSMUA_Achr7P10170_001	Banana	cytosol	32.79	44.44
GSMUA_Achr10P...	Banana	cytosol, nucleus, peroxisome	23.77	43.61
GSMUA_Achr4P24890_001	Banana	cytosol, plastid	52.05	43.05
GSMUA_Achr1P14590_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	32.1	42.11
GSMUA_Achr5P20150_001	Banana	cytosol	53.01	38.92
GSMUA_Achr10P...	Banana	cytosol, plastid	22.68	36.32
CDY42882	Canola	nucleus	15.85	36.02
GSMUA_Achr10P...	Banana	cytosol	13.25	31.8
GSMUA_Achr6P35870_001	Banana	plasma membrane	33.88	26.08
GSMUA_Achr2P00290_001	Banana	endoplasmic reticulum	12.43	24.33
GSMUA_Achr9P16530_001	Banana	cytosol, nucleus, peroxisome	21.58	14.95
GSMUA_Achr11P...	Banana	mitochondrion	3.28	13.64
GSMUA_Achr2P00270_001	Banana	cytosol, nucleus, peroxisome	12.02	10.84
GSMUA_Achr11P...	Banana	cytosol	2.6	7.98

Protein Annotations

KEGG:00564+3.1.4.4	KEGG:00565+3.1.4.4	Gene3D:2.60.40.150	Gene3D:3.30.870.10	MapMan:50.3.1	InterPro:C2_dom
InterPro:C2_domain_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0004630	GO:GO:0005488	GO:GO:0005509
GO:GO:0005575	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987
GO:GO:0016020	GO:GO:0016042	GO:GO:0016787	GO:GO:0046470	GO:GO:0070290	EnsemblPlantsGene:GSMUA_Achr1G07360_001
EnsemblPlants:GSMUA_Achr1P07360_001	EnsemblPlants:GSMUA_Achr1T07360_001	InterPro:IPR000008	InterPro:IPR001736	InterPro:IPR035892	UniProt:M0RXU4
PFAM:PF00168	PFAM:PF00614	PFAM:PF12357	PIRSF:PIRSF036470	InterPro:PLipase_D/transphosphatidylase	InterPro:PLipase_D_C
InterPro:PLipase_D_fam	InterPro:PLipase_D_pln	PFscan:PS50004	PFscan:PS50035	PANTHER:PTHR18896	PANTHER:PTHR18896:SF86
SMART:SM00155	SMART:SM00239	SUPFAM:SSF49562	SUPFAM:SSF56024	UniParc:UPI000294FA02	:

Description

Phospholipase D delta [Source:GMGC_GENE;Acc:GSMUA_Achr1G07360_001]

Coordinates

chr1:-:5753382..5762917

Molecular Weight (calculated)

82760.3 Da

IEP (calculated)

6.509

GRAVY (calculated)

-0.377

Length

732 amino acids

Sequence
(BLAST)

001: MTNSSAGTVG GTEEDVLLHG DLVLTVIQAR RLPNMDMFSE RIRRCFAPCA TLDPYVTASL ADATVARTRV ISNSEDPVWN EQFKIPLAHR APALVLHVKD
101: DDVFGAEHIG TVSISAVHIA SGEKIRDWFP ILGPNGEPPK PDTALHLSIE FTPAHHLIYL VGWSIYHEIK LVREPTRSLP NAGKLTLGEL LKYKSQEGVR
201: VCMLVWDDKT SHDKFFLKTG GVMQTHDEET RKFFKHSSVI CVLSPRYASN KPLSNSITGA LAVVGTLFTH HQKCVLVDTQ ASGNERKITA FIGGLDLCDG
301: RYDTPEHRLF RDLDTVFLND VHNPTFSAGT NGPRQPWHDL HCKIEGPAAY DILKNFEQRW RKATKWREFS LHDDPSLWVS REEDSDHWHV QVFRSIDSGS
401: VKGFPSNVQE AMNNLVCQKN LVIDKSIHTA YVKAIRSAQH FIYIENQYFL GSSFAWPSYK NPGADNLIPM ELALKVASKI RANERFAVYV VMPMWPEGDP
501: NSNAVQEILF WQGQTIQMMY EIVAQELKSM NLENAHPQDY LNFYCLGNRE ETPADKLQQD DQFLEKSPAT LSQKFRRFMI YVHAKGMIVD DEYVIVGSAN
601: INQRSLAGSR DTEIAMGAYQ PHHTWTKNRR HPHGQVYGYR MSLWAEHMGM LDDRFEEPNS LECVKFVNKT AEDNWSRYTA DEMTALTGHL LRYPIQVEAD
701: GNVGPLPNHE CFPDVGGKVL GAPNALPDTL TM

Best Arabidopsis Sequence Match ( AT2G42010.1 )
(BLAST)

0001: MDNHGPRYPY PYGQYPYPYP YPAPYRPPSS EPYPPPPTNQ YSAPYYPYPP PPYATPPPYA SPPPPHQHTS GSHSGPLDYS HNPQPSSLAA APPEYHRHSF
0101: DYQPSPYPYQ PQGNFGAYGP PPPHYSYQEP AQYPPPETKP QEPLPPPQQT QGFQEYRRQD CLSTGGTGHD NVSNSGSSYP PVDELLGGLH ISTNQPGPSV
0201: PQLSSLPSNS WQSRPGDLYG YPNSSFPSNS HLPQLGRVDS SSSYYASTES PHSADMQMTL FGKGSLKVLL LHGNLDIWIY HAKNLPNMDM FHKTLGDMFG
0301: RLPGKIEGQL TSKITSDPYV SVSVAGAVIG RTYVMSNSEN PVWMQHFYVP VAHHAAEVHF VVKDSDVVGS QLIGLVTIPV EQIYSGAKIE GTYPILNSNG
0401: KPCKPGANLS LSIQYTPMDK LSVYHHGVGA GPDYQGVPGT YFPLRKGGTV RLYQDAHVPE GMLPGIRLDN GMSYEHGKCW HDMFDAIRQA RRLIYITGWS
0501: VWHKVKLIRD KLGPASECTL GELLRSKSQE GVRVLLLIWD DPTSRSILGY KTDGVMATHD EETRRFFKHS SVQVLLCPRN AGKRHSWVKQ REVGTIYTHH
0601: QKNVIVDADA GGNRRKIIAF VGGLDLCDGR YDTPQHPLFR TLQTIHKDDF HNPTFTGNLS GCPREPWHDL HSKIDGPAAY DVLTNFEERW LKAAKPSGIK
0701: KFKTSYDDAL LRIDRIPDIL GVSDTPTVSE NDPEAWHVQI FRSIDSNSVK GFPKDPKDAT CKNLVCGKNV LIDMSIHTAY VKAIRAAQHF IYIENQYFIG
0801: SSYNWNAHKD IGANNLIPME IALKIAEKIR ANERFAAYIV IPMWPEGVPT GAATQRILYW QHKTIQMMYE TIYKALVETG LEGAFSPQDY LNFFCLGNRE
0901: MVDGIDNSGT GSPSNANTPQ ALSRKSRRFM VYVHSKGMVV DDEYVVIGSA NINQRSMEGT RDTEIAMGAY QPQHTWARKH SGPRGQIYGY RMSLWAEHMA
1001: TLDDCFTQPE SIECVRKVRT MGERNWKQFA AEEVSDMRGH LLKYPVEVDR KGKVRPLPGS ETFPDVGGNI VGSFIAIQEN LTI

Arabidopsis Description

PLDBETA1phospholipase D beta 1 [Source:TAIR;Acc:AT2G42010]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.