Factsheet for TraesCS5D01G341800.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G336100.1	Wheat	cytosol	98.79	94.9
HORVU5Hr1G084740.4	Barley	plastid	81.88	94.83
TraesCS5A01G337100.2	Wheat	cytosol	98.43	94.55
KXG36094	Sorghum	cytosol	83.09	80.09
Os09t0543100-02	Rice	plasma membrane	82.37	79.86
Zm00001d006257_P009	Maize	cytosol	80.92	78.27
Zm00001d022594_P002	Maize	cytosol	79.35	74.24
Zm00001d006262_P001	Maize	cytoskeleton, cytosol, peroxisome	12.92	69.48
GSMUA_AchrUn_...	Banana	cytosol	71.62	69.11
GSMUA_Achr1P07360_001	Banana	cytosol	59.78	67.62
GSMUA_Achr1P14920_001	Banana	plastid	64.01	66.75
PGSC0003DMT400025590	Potato	cytosol	64.61	65.97
Solyc04g082000.2.1	Tomato	cytosol	66.43	65.55
KRH60977	Soybean	cytosol	65.46	63.99
KRH51648	Soybean	cytosol	64.73	63.28
VIT_00s0264g00100.t01	Wine grape	cytosol	66.18	62.77
VIT_18s0001g00770.t01	Wine grape	nucleus	65.94	62.4
KRH76589	Soybean	extracellular	65.1	62.38
KRH28860	Soybean	mitochondrion	64.86	62.01
PGSC0003DMT400009250	Potato	cytosol	41.18	61.66
KRH37270	Soybean	cytosol	19.57	61.6
Bra034939.1-P	Field mustard	cytosol	61.72	61.34
AT4G35790.1	Thale cress	cytosol	64.01	61.06
Solyc02g083340.2.1	Tomato	nucleus	63.04	60.28
CDX72557	Canola	cytosol	62.56	59.88
Bra017730.1-P	Field mustard	cytosol	60.63	59.83
CDY47037	Canola	cytosol	63.41	59.32
Solyc02g061850.2.1	Tomato	cytosol	60.75	59.18
CDY35793	Canola	cytosol	61.23	58.61
GSMUA_Achr9P21120_001	Banana	nucleus	17.75	58.33
TraesCS5D01G524600.1	Wheat	cytosol	58.94	58.1
Bra010512.1-P	Field mustard	cytosol	55.31	56.75
CDY67335	Canola	cytosol	59.3	56.7
TraesCS5D01G208300.2	Wheat	cytosol	57.49	56.33
CDY41630	Canola	cytosol	58.94	56.29
PGSC0003DMT400009253	Potato	cytosol	17.27	54.79
CDX80734	Canola	cytosol	7.61	52.07
TraesCS1D01G189300.1	Wheat	cytosol	49.88	50.99
TraesCS4D01G346700.1	Wheat	cytosol	49.88	49.7
TraesCS1D01G370600.1	Wheat	cytosol	49.4	49.4
TraesCS1D01G116700.1	Wheat	cytosol	42.39	43.07
TraesCS3D01G130900.1	Wheat	golgi	42.03	42.86
TraesCS7D01G372800.1	Wheat	cytosol	41.55	41.95
TraesCS1D01G379900.2	Wheat	cytosol	40.46	40.17
TraesCS5D01G231100.1	Wheat	cytosol	38.41	38.31
TraesCS1D01G035800.2	Wheat	cytosol	36.84	36.88
TraesCS7D01G531300.1	Wheat	cytosol	36.59	36.77
TraesCS7D01G531200.1	Wheat	cytosol	36.47	36.65
CDY42882	Canola	nucleus	11.96	30.75
TraesCS1D01G230100.1	Wheat	cytosol, nucleus, peroxisome	22.1	16.18

Protein Annotations

KEGG:00564+3.1.4.4	KEGG:00565+3.1.4.4	Gene3D:3.30.870.10	MapMan:50.3.1	InterPro:C2_dom	GO:GO:0003674
GO:GO:0003824	GO:GO:0004630	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0005886	GO:GO:0006629	GO:GO:0006950
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0008219	GO:GO:0009409
GO:GO:0009506	GO:GO:0009628	GO:GO:0009719	GO:GO:0009789	GO:GO:0009987	GO:GO:0012501
GO:GO:0016020	GO:GO:0016787	GO:GO:0046470	GO:GO:0046473	GO:GO:0090333	InterPro:IPR000008
InterPro:IPR001736	PFAM:PF00168	PFAM:PF00614	PFAM:PF12357	PIRSF:PIRSF036470	InterPro:PLipase_D/transphosphatidylase
InterPro:PLipase_D_C	InterPro:PLipase_D_fam	InterPro:PLipase_D_pln	PFscan:PS50004	PFscan:PS50035	PANTHER:PTHR18896
PANTHER:PTHR18896:SF86	SMART:SM00239	SUPFAM:SSF49562	SUPFAM:SSF56024	EnsemblPlantsGene:TraesCS5D01G341800	EnsemblPlants:TraesCS5D01G341800.2
TIGR:cd04015	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr5D:+:429904719..429910965

Molecular Weight (calculated)

93285.7 Da

IEP (calculated)

7.258

GRAVY (calculated)

-0.450

Length

828 amino acids

Sequence
(BLAST)

001: MASSGGDESP SPAKPVLLHG DLDLWVVEAR LLPNMDMFSE HIRRCFASCG TASSCAPRQP PPNSRGVGEA GSRRHHHRRI ITSDPYVTLS VAGAVVARTA
101: VIPNSQEPRW DEQFFVPLAH RATLLDFQVK DNDTFGAQLI GTASVPAERV LAAADEVEEW VPILGTSGKT YKPRTALFIR YRFRPFAANP VYRRGIPGDP
201: DQQGVKDSYF PLRHGGKVTL YQDAHVNEGD LPDVQLERGK KFEHNQCWED ICHAILEAHH MIYIVGWSIY DKVKLVREPS SSRALPEGGE LTLGELLKFK
301: SQEGVRVCLL VWDDKTSHDK LFIKTGGVMG THDEETRKFF KHSSVICVLS PRYASSKLSI FKQQVVGTLF THHQKCVLVD TQASGNKRKV TAFIGGLDLC
401: DGRYDTPQHR LFKDLDTVFE NDFHNPTFSA GAKGPRQPWH DLHCKIDGPA AYDVLKNFEQ RWRKASKFRD RFRKVSRWKD DALIKLERIS WILSPSPNVP
501: NDHVSLRVSK EEDPENWHVQ VFRSIDSGSL KGFPSDCKEA SKQNLVCRKN LIIDKSIHTA YVRAIRSAQH FIYIENQYFL GSSYEWPSYV NSGADNLIPM
601: ELALKIATKI RAGERFAVYV VIPMWPEGVP TSASVQEILF FQAQTMEMMY GVIARELKAM NIEDAHLQDY LNFYCLGNRE EPSTDGSPES DKSTDKSAAR
701: SLAGSRDTEI AMGAYQPHHA WSSKKGHPHG QVYGYRNSLW AEHLGMVDDH FKEPSSLDCV RLVNQIAEEN WERFASEEMK TLQGHLLRYP VKVEPDGKIV
801: PLPDQECFPD VGGKICGAPT SLPDSLTM

Best Arabidopsis Sequence Match ( AT4G35790.2 )
(BLAST)

001: MAEKVSEDVM LLHGDLDLKI VKARRLPNMD MFSEHLRRLF TACNACARPT DTDDVDPRDK GEFGDKNIRS HRKVITSDPY VTVVVPQATL ARTRVLKNSQ
101: EPLWDEKFNI SIAHPFAYLE FQVKDDDVFG AQIIGTAKIP VRDIASGERI SGWFPVLGAS GKPPKAETAI FIDMKFTPFD QIHSYRCGIA GDPERRGVRR
201: TYFPVRKGSQ VRLYQDAHVM DGTLPAIGLD NGKVYEHGKC WEDICYAISE AHHMIYIVGW SIFHKIKLVR ETKVPRDKDM TLGELLKYKS QEGVRVLLLV
301: WDDKTSHDKF GIKTPGVMGT HDEETRKFFK HSSVICVLSP RYASSKLGLF KQQVVGTLFT HHQKCVLVDT QAVGNNRKVT AFIGGLDLCD GRYDTPEHRI
401: LHDLDTVFKD DFHNPTFPAG TKAPRQPWHD LHCRIDGPAA YDVLINFEQR WRKATRWKEF SLRLKGKTHW QDDALIRIGR ISWILSPVFK FLKDGTSIIP
501: EDDPCVWVSK EDDPENWHVQ IFRSIDSGSV KGFPKYEDEA EAQHLECAKR LVVDKSIQTA YIQTIRSAQH FIYIENQYFL GSSYAWPSYR DAGADNLIPM
601: ELALKIVSKI RAKERFAVYV VIPLWPEGDP KSGPVQEILY WQSQTMQMMY DVIAKELKAV QSDAHPLDYL NFYCLGKREQ LPDDMPATNG SVVSDSYNFQ
701: RFMIYVHAKG MIVDDEYVLM GSANINQRSM AGTKDTEIAM GAYQPNHTWA HKGRHPRGQV YGYRMSLWAE HLGKTGDEFV EPSDLECLKK VNTISEENWK
801: RFIDPKFSEL QGHLIKYPLQ VDVDGKVSPL PDYETFPDVG GKIIGAHSMA LPDTLTT

Arabidopsis Description

PLDDELTAPhospholipase D delta [Source:UniProtKB/Swiss-Prot;Acc:Q9C5Y0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.