Factsheet for TraesCS5B01G336100.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G341800.2	Wheat	cytosol	94.9	98.79
TraesCS5A01G337100.2	Wheat	cytosol	97.91	97.91
HORVU5Hr1G084740.4	Barley	plastid	78.42	94.55
Zm00001d006262_P001	Maize	cytoskeleton, cytosol, peroxisome	15.31	85.71
KXG36094	Sorghum	cytosol	83.29	83.59
Os09t0543100-02	Rice	plasma membrane	82.37	83.14
Zm00001d006257_P009	Maize	cytosol	81.21	81.78
Zm00001d022594_P002	Maize	cytosol	79.58	77.51
GSMUA_AchrUn_...	Banana	cytosol	71.58	71.91
GSMUA_Achr1P07360_001	Banana	cytosol	60.32	71.04
GSMUA_Achr1P14920_001	Banana	plastid	64.27	69.77
GSMUA_Achr9P21120_001	Banana	nucleus	20.3	69.44
PGSC0003DMT400025590	Potato	cytosol	65.2	69.3
Solyc04g082000.2.1	Tomato	cytosol	66.94	68.77
KRH60977	Soybean	cytosol	66.01	67.18
KRH51648	Soybean	cytosol	65.2	66.35
VIT_00s0264g00100.t01	Wine grape	cytosol	66.71	65.86
KRH76589	Soybean	extracellular	65.66	65.51
VIT_18s0001g00770.t01	Wine grape	nucleus	66.13	65.14
KRH28860	Soybean	mitochondrion	65.43	65.13
PGSC0003DMT400009253	Potato	cytosol	19.61	64.75
Bra034939.1-P	Field mustard	cytosol	62.18	64.35
AT4G35790.1	Thale cress	cytosol	64.04	63.59
Solyc02g083340.2.1	Tomato	nucleus	63.46	63.16
Bra017730.1-P	Field mustard	cytosol	61.14	62.81
CDX72557	Canola	cytosol	62.88	62.66
CDY47037	Canola	cytosol	63.81	62.15
Solyc02g061850.2.1	Tomato	cytosol	61.25	62.12
KRH37270	Soybean	cytosol	18.79	61.6
CDY35793	Canola	cytosol	61.72	61.5
PGSC0003DMT400009250	Potato	cytosol	39.44	61.48
Bra010512.1-P	Field mustard	cytosol	56.03	59.85
TraesCS5B01G525600.1	Wheat	cytosol	58.7	59.67
CDY67335	Canola	cytosol	59.86	59.58
TraesCS5B01G200600.1	Wheat	cytosol	58.35	59.53
CDY41630	Canola	cytosol	59.4	59.05
TraesCS1B01G195200.1	Wheat	cytosol	51.04	54.32
TraesCS1B01G382600.1	Wheat	mitochondrion	50.7	52.78
CDX80734	Canola	cytosol	7.19	51.24
TraesCS4B01G352300.1	Wheat	cytosol	50.46	50.76
TraesCS6B01G096200.1	Wheat	cytosol	49.54	49.36
TraesCS3B01G149100.1	Wheat	unclear	43.27	45.94
TraesCS1B01G135200.1	Wheat	cytosol	42.81	45.11
TraesCS4B01G377600.1	Wheat	cytosol	42.23	44.34
TraesCS1B01G393300.3	Wheat	cytosol	42.34	43.82
TraesCS7B01G277900.1	Wheat	plastid	42.34	42.89
TraesCS5B01G222500.1	Wheat	cytosol	39.44	41.16
TraesCS7B01G468300.1	Wheat	cytosol	37.82	39.56
TraesCS7B01G468200.1	Wheat	cytosol	37.59	39.23
TraesCS1B01G050400.1	Wheat	cytosol	37.24	38.77
CDY42882	Canola	nucleus	14.27	38.2
TraesCS1B01G242500.1	Wheat	cytosol, nucleus, peroxisome	23.32	17.77

Protein Annotations

KEGG:00564+3.1.4.4	KEGG:00565+3.1.4.4	Gene3D:3.30.870.10	MapMan:5.7.2.4.3	InterPro:C2_dom	GO:GO:0003674
GO:GO:0003824	GO:GO:0004630	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575	GO:GO:0006629
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016787	GO:GO:0046470
InterPro:IPR000008	InterPro:IPR001736	PFAM:PF00168	PFAM:PF00614	PFAM:PF12357	PIRSF:PIRSF036470
InterPro:PLipase_D/transphosphatidylase	InterPro:PLipase_D_C	InterPro:PLipase_D_fam	InterPro:PLipase_D_pln	PFscan:PS50004	PFscan:PS50035
PANTHER:PTHR18896	PANTHER:PTHR18896:SF86	SMART:SM00155	SMART:SM00239	SUPFAM:SSF49562	SUPFAM:SSF56024
EnsemblPlantsGene:TraesCS5B01G336100	EnsemblPlants:TraesCS5B01G336100.1	TIGR:cd04015	SEG:seg	:	:

Description

No Description!

Coordinates

chr5B:+:519147032..519153327

Molecular Weight (calculated)

97138.5 Da

IEP (calculated)

7.470

GRAVY (calculated)

-0.428

Length

862 amino acids

Sequence
(BLAST)

001: MASSGGDESP SPAKPVLLHG DLDLWVVEAR LLPNMDMFSE HIRRCFASCG TASSCAPRQP PPNSRGVGEA GSRRHHHRRI ITSDPYVTLS VAGAVVARTA
101: VIPNSQEPRW DEQFFVPLAH RATLLDFQVK DNDTFGAQLI GTASVPAERV VAAVDEVEEW VPIVGTSGKT YKPRTALFIR YRFRPFAANP VYRRGIPGDP
201: DQQGVKDSYF PLRHGGKVTL YQDAHVNEGD LPDVQLERGK KFEHNQCWED ICHAILEAHH MIYIVGWSIY DKVKLVREPS SSRTLPEGGE LTLGELLKFK
301: SQEGVRVCLL VWDDKTSHDK LFIKTGGVMG THDEETRKFF KHSSVICVLS PRYASSKLSI FKQQVVGTLF THHQKCVLVD TQASGNKRKV TAFIGGLDLC
401: DGRYDTPQHR LFKDLDTVFE NDFHNPTFSA GAKGPRQPWH DLHCKLDGPA AYDVLKNFEQ RWRKASKFRD RFRKVSRWKD DALIKLERIS WILSPSPNVP
501: NDHVSLRVSK EEDPENWHVQ VFRSIDSGSL KGFPSDCKEA SKQNLVCRKN LIIDKSIHTA YVRAIRSAQH FIYIENQYFL GSSYEWPSYV NSGADNLIPM
601: ELALKIATKI RAGERFAVYI VIPMWPEGVP TSASVQEILF FQAQTMEMMY GVIARELKAM NIEDAHLHDY LNFYCLGNRE EPSTDGSPGS DKSTDKSAAG
701: LARKHRRFMI YVHAKGMIVD DEYVILGSAN INQRSLAGSR DTEIAMGAYQ PHHAWSSKKG HPHGQVYGYR SSLWAEHLGM VDDHFKEPSS LDCVRLVNQI
801: AEENWERFAS EEMQTLQGHL LRYPVKVEPD GKIVPLPDQE CFPDVGGKIC GAPTSLPDSL TM

Best Arabidopsis Sequence Match ( AT4G35790.2 )
(BLAST)

001: MAEKVSEDVM LLHGDLDLKI VKARRLPNMD MFSEHLRRLF TACNACARPT DTDDVDPRDK GEFGDKNIRS HRKVITSDPY VTVVVPQATL ARTRVLKNSQ
101: EPLWDEKFNI SIAHPFAYLE FQVKDDDVFG AQIIGTAKIP VRDIASGERI SGWFPVLGAS GKPPKAETAI FIDMKFTPFD QIHSYRCGIA GDPERRGVRR
201: TYFPVRKGSQ VRLYQDAHVM DGTLPAIGLD NGKVYEHGKC WEDICYAISE AHHMIYIVGW SIFHKIKLVR ETKVPRDKDM TLGELLKYKS QEGVRVLLLV
301: WDDKTSHDKF GIKTPGVMGT HDEETRKFFK HSSVICVLSP RYASSKLGLF KQQVVGTLFT HHQKCVLVDT QAVGNNRKVT AFIGGLDLCD GRYDTPEHRI
401: LHDLDTVFKD DFHNPTFPAG TKAPRQPWHD LHCRIDGPAA YDVLINFEQR WRKATRWKEF SLRLKGKTHW QDDALIRIGR ISWILSPVFK FLKDGTSIIP
501: EDDPCVWVSK EDDPENWHVQ IFRSIDSGSV KGFPKYEDEA EAQHLECAKR LVVDKSIQTA YIQTIRSAQH FIYIENQYFL GSSYAWPSYR DAGADNLIPM
601: ELALKIVSKI RAKERFAVYV VIPLWPEGDP KSGPVQEILY WQSQTMQMMY DVIAKELKAV QSDAHPLDYL NFYCLGKREQ LPDDMPATNG SVVSDSYNFQ
701: RFMIYVHAKG MIVDDEYVLM GSANINQRSM AGTKDTEIAM GAYQPNHTWA HKGRHPRGQV YGYRMSLWAE HLGKTGDEFV EPSDLECLKK VNTISEENWK
801: RFIDPKFSEL QGHLIKYPLQ VDVDGKVSPL PDYETFPDVG GKIIGAHSMA LPDTLTT

Arabidopsis Description

PLDDELTAPhospholipase D delta [Source:UniProtKB/Swiss-Prot;Acc:Q9C5Y0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.