Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G071700.1 | Wheat | cytosol, nucleus, plastid | 94.68 | 94.25 |
| HORVU6Hr1G012780.6 | Barley | cytosol, nucleus, plastid | 92.25 | 91.83 |
| OQU84227 | Sorghum | cytosol | 65.43 | 61.59 |
| Zm00001d015033_P001 | Maize | extracellular, plastid, vacuole | 64.39 | 59.83 |
| PGSC0003DMT400009253 | Potato | cytosol | 16.42 | 54.41 |
| PGSC0003DMT400025590 | Potato | cytosol | 46.94 | 50.06 |
| Solyc04g082000.2.1 | Tomato | cytosol | 48.55 | 50.06 |
| KRH60977 | Soybean | cytosol | 48.79 | 49.82 |
| Bra034939.1-P | Field mustard | cytosol | 47.98 | 49.82 |
| KRH51648 | Soybean | cytosol | 48.67 | 49.7 |
| TraesCS5B01G336100.1 | Wheat | cytosol | 49.36 | 49.54 |
| Solyc02g061850.2.1 | Tomato | cytosol | 48.09 | 48.94 |
| GSMUA_Achr11P... | Banana | cytosol | 46.94 | 48.8 |
| VIT_18s0001g00770.t01 | Wine grape | nucleus | 49.02 | 48.46 |
| AT4G35790.1 | Thale cress | cytosol | 48.55 | 48.39 |
| Solyc02g083340.2.1 | Tomato | nucleus | 48.44 | 48.38 |
| TraesCS5B01G525600.1 | Wheat | cytosol | 47.17 | 48.11 |
| CDX72557 | Canola | cytosol | 48.09 | 48.09 |
| Bra017730.1-P | Field mustard | cytosol | 46.59 | 48.03 |
| VIT_00s0264g00100.t01 | Wine grape | cytosol | 48.44 | 48.0 |
| KRH76589 | Soybean | extracellular | 47.75 | 47.8 |
| CDY35793 | Canola | cytosol | 47.63 | 47.63 |
| KRH28860 | Soybean | mitochondrion | 47.63 | 47.58 |
| CDY47037 | Canola | cytosol | 48.32 | 47.23 |
| Bra010512.1-P | Field mustard | cytosol | 44.05 | 47.21 |
| TraesCS5B01G200600.1 | Wheat | cytosol | 45.55 | 46.63 |
| CDY67335 | Canola | cytosol | 46.59 | 46.54 |
| CDY41630 | Canola | cytosol | 46.59 | 46.48 |
| TraesCS1B01G382600.1 | Wheat | mitochondrion | 43.81 | 45.77 |
| TraesCS1B01G195200.1 | Wheat | cytosol | 42.66 | 45.56 |
| PGSC0003DMT400009250 | Potato | cytosol | 28.9 | 45.21 |
| CDX80734 | Canola | cytosol | 6.13 | 43.8 |
| TraesCS4B01G352300.1 | Wheat | cytosol | 42.31 | 42.71 |
| KRH37270 | Soybean | cytosol | 12.72 | 41.83 |
| TraesCS3B01G149100.1 | Wheat | unclear | 36.88 | 39.29 |
| TraesCS4B01G377600.1 | Wheat | cytosol | 37.23 | 39.22 |
| TraesCS1B01G393300.3 | Wheat | cytosol | 36.88 | 38.3 |
| TraesCS1B01G135200.1 | Wheat | cytosol | 36.19 | 38.26 |
| TraesCS7B01G277900.1 | Wheat | plastid | 36.99 | 37.6 |
| TraesCS1B01G050400.1 | Wheat | cytosol | 34.68 | 36.23 |
| TraesCS5B01G222500.1 | Wheat | cytosol | 34.57 | 36.2 |
| TraesCS7B01G468200.1 | Wheat | cytosol | 34.45 | 36.08 |
| TraesCS7B01G468300.1 | Wheat | cytosol | 34.1 | 35.8 |
| Os02t0120200-01 | Rice | extracellular | 32.83 | 31.21 |
| CDY42882 | Canola | nucleus | 11.56 | 31.06 |
| TraesCS1B01G242500.1 | Wheat | cytosol, nucleus, peroxisome | 21.04 | 16.09 |
Protein Annotations
| KEGG:00564+3.1.4.4 | KEGG:00565+3.1.4.4 | Gene3D:3.30.870.10 | MapMan:50.3.1 | InterPro:C2_dom | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004630 | GO:GO:0005488 | GO:GO:0005509 | GO:GO:0005575 | GO:GO:0006629 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016787 | GO:GO:0046470 |
| InterPro:IPR000008 | InterPro:IPR001736 | PFAM:PF00168 | PFAM:PF00614 | PFAM:PF12357 | PIRSF:PIRSF036470 |
| InterPro:PLipase_D/transphosphatidylase | InterPro:PLipase_D_C | InterPro:PLipase_D_fam | InterPro:PLipase_D_pln | PFscan:PS50035 | PANTHER:PTHR18896 |
| PANTHER:PTHR18896:SF70 | SMART:SM00155 | SMART:SM00239 | SUPFAM:SSF49562 | SUPFAM:SSF56024 | EnsemblPlantsGene:TraesCS6B01G096200 |
| EnsemblPlants:TraesCS6B01G096200.1 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr6B:-:72332021..72340550
Molecular Weight (calculated)
96212.6 Da
IEP (calculated)
7.359
GRAVY (calculated)
-0.370
Length
865 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSMADDGER LELLHGDLDL TIHEACGLPN MDILSTILRR LCIRPRRLPS RNIDADTDAD SPVRRRRRRQ KPRGHHSIVP TSDPYALVAV SRPDVPDTTI
101: ARTYVVRNSE APDWSARIRI PLAHEASRLV LQVRDSDPFG SDLIGAAYLP AAALLDGKPI VDAWLPLLRP DGRGPPKPNS AIRVSLTFTP ASSSSSRRHR
201: FGGVPAYFPA RRGCELKLYQ DAHVPVGAPC SYERGRCWED VCMAVLGAQK LVYVAGWAVG ARVRLLREEM SPEMAEKAAE VRALAGVEVE KMALGELLKY
301: KSQEGVRVCL LVSDHHDTPL HPSFFLNTGG MMQTSGEDTK KFFKQSSVIC VLSHRYPRSK VDMAKQKVVG TPYAHNQKCI LVDTPASEAT RRITAFLGGL
401: DLAAGRYDTP AHRLFEDLDT VFRGDIHNPT LGDAAAENGP RLPWHDMHCR LDGAAAYDVL KNFEQRWRRA TAKHLKASKH GKDDALLKLQ RIPWILSPVV
501: ADAEDDALRV LPEDDPRCWH AQVFRSVDAG SVKGFPRSWE TEEMEARNLL CDKSLAVEQS IHAAYVAAIR AADRFVYLET ERFVGSSYAW PTSFRHPGAG
601: NLVPMEIALK AASKIRARED FAAYVVLPMW PAAEGPPGSA PAQESLFWQA QTMQAMYEVV AKAIAEAGAG VRAHPQDYLN FYCLGNREQA PATPPHLETG
701: TSPAALARRH GRFMVYVHSK GMVVDDEYVL LGSANVNQRS LSGSRDTEIA VGAHQPHHTG RRPRGQVHRY RMSLWEEHLG WLWDVLEAPE SPECVRLVNQ
801: VARENWERYT DEGEVAEEMQ GHLMKYPVEV DGYGGVWPLT GHEFFPDVGG RVLGSTNKFP DHLTM
101: ARTYVVRNSE APDWSARIRI PLAHEASRLV LQVRDSDPFG SDLIGAAYLP AAALLDGKPI VDAWLPLLRP DGRGPPKPNS AIRVSLTFTP ASSSSSRRHR
201: FGGVPAYFPA RRGCELKLYQ DAHVPVGAPC SYERGRCWED VCMAVLGAQK LVYVAGWAVG ARVRLLREEM SPEMAEKAAE VRALAGVEVE KMALGELLKY
301: KSQEGVRVCL LVSDHHDTPL HPSFFLNTGG MMQTSGEDTK KFFKQSSVIC VLSHRYPRSK VDMAKQKVVG TPYAHNQKCI LVDTPASEAT RRITAFLGGL
401: DLAAGRYDTP AHRLFEDLDT VFRGDIHNPT LGDAAAENGP RLPWHDMHCR LDGAAAYDVL KNFEQRWRRA TAKHLKASKH GKDDALLKLQ RIPWILSPVV
501: ADAEDDALRV LPEDDPRCWH AQVFRSVDAG SVKGFPRSWE TEEMEARNLL CDKSLAVEQS IHAAYVAAIR AADRFVYLET ERFVGSSYAW PTSFRHPGAG
601: NLVPMEIALK AASKIRARED FAAYVVLPMW PAAEGPPGSA PAQESLFWQA QTMQAMYEVV AKAIAEAGAG VRAHPQDYLN FYCLGNREQA PATPPHLETG
701: TSPAALARRH GRFMVYVHSK GMVVDDEYVL LGSANVNQRS LSGSRDTEIA VGAHQPHHTG RRPRGQVHRY RMSLWEEHLG WLWDVLEAPE SPECVRLVNQ
801: VARENWERYT DEGEVAEEMQ GHLMKYPVEV DGYGGVWPLT GHEFFPDVGG RVLGSTNKFP DHLTM
0001: MDNHGPRYPY PYGQYPYPYP YPAPYRPPSS EPYPPPPTNQ YSAPYYPYPP PPYATPPPYA SPPPPHQHTS GSHSGPLDYS HNPQPSSLAA APPEYHRHSF
0101: DYQPSPYPYQ PQGNFGAYGP PPPHYSYQEP AQYPPPETKP QEPLPPPQQT QGFQEYRRQD CLSTGGTGHD NVSNSGSSYP PVDELLGGLH ISTNQPGPSV
0201: PQLSSLPSNS WQSRPGDLYG YPNSSFPSNS HLPQLGRVDS SSSYYASTES PHSADMQMTL FGKGSLKVLL LHGNLDIWIY HAKNLPNMDM FHKTLGDMFG
0301: RLPGKIEGQL TSKITSDPYV SVSVAGAVIG RTYVMSNSEN PVWMQHFYVP VAHHAAEVHF VVKDSDVVGS QLIGLVTIPV EQIYSGAKIE GTYPILNSNG
0401: KPCKPGANLS LSIQYTPMDK LSVYHHGVGA GPDYQGVPGT YFPLRKGGTV RLYQDAHVPE GMLPGIRLDN GMSYEHGKCW HDMFDAIRQA RRLIYITGWS
0501: VWHKVKLIRD KLGPASECTL GELLRSKSQE GVRVLLLIWD DPTSRSILGY KTDGVMATHD EETRRFFKHS SVQVLLCPRN AGKRHSWVKQ REVGTIYTHH
0601: QKNVIVDADA GGNRRKIIAF VGGLDLCDGR YDTPQHPLFR TLQTIHKDDF HNPTFTGNLS GCPREPWHDL HSKIDGPAAY DVLTNFEERW LKAAKPSGIK
0701: KFKTSYDDAL LRIDRIPDIL GVSDTPTVSE NDPEAWHVQI FRSIDSNSVK GFPKDPKDAT CKNLVCGKNV LIDMSIHTAY VKAIRAAQHF IYIENQYFIG
0801: SSYNWNAHKD IGANNLIPME IALKIAEKIR ANERFAAYIV IPMWPEGVPT GAATQRILYW QHKTIQMMYE TIYKALVETG LEGAFSPQDY LNFFCLGNRE
0901: MVDGIDNSGT GSPSNANTPQ ALSRKSRRFM VYVHSKGMVV DDEYVVIGSA NINQRSMEGT RDTEIAMGAY QPQHTWARKH SGPRGQIYGY RMSLWAEHMA
1001: TLDDCFTQPE SIECVRKVRT MGERNWKQFA AEEVSDMRGH LLKYPVEVDR KGKVRPLPGS ETFPDVGGNI VGSFIAIQEN LTI
0101: DYQPSPYPYQ PQGNFGAYGP PPPHYSYQEP AQYPPPETKP QEPLPPPQQT QGFQEYRRQD CLSTGGTGHD NVSNSGSSYP PVDELLGGLH ISTNQPGPSV
0201: PQLSSLPSNS WQSRPGDLYG YPNSSFPSNS HLPQLGRVDS SSSYYASTES PHSADMQMTL FGKGSLKVLL LHGNLDIWIY HAKNLPNMDM FHKTLGDMFG
0301: RLPGKIEGQL TSKITSDPYV SVSVAGAVIG RTYVMSNSEN PVWMQHFYVP VAHHAAEVHF VVKDSDVVGS QLIGLVTIPV EQIYSGAKIE GTYPILNSNG
0401: KPCKPGANLS LSIQYTPMDK LSVYHHGVGA GPDYQGVPGT YFPLRKGGTV RLYQDAHVPE GMLPGIRLDN GMSYEHGKCW HDMFDAIRQA RRLIYITGWS
0501: VWHKVKLIRD KLGPASECTL GELLRSKSQE GVRVLLLIWD DPTSRSILGY KTDGVMATHD EETRRFFKHS SVQVLLCPRN AGKRHSWVKQ REVGTIYTHH
0601: QKNVIVDADA GGNRRKIIAF VGGLDLCDGR YDTPQHPLFR TLQTIHKDDF HNPTFTGNLS GCPREPWHDL HSKIDGPAAY DVLTNFEERW LKAAKPSGIK
0701: KFKTSYDDAL LRIDRIPDIL GVSDTPTVSE NDPEAWHVQI FRSIDSNSVK GFPKDPKDAT CKNLVCGKNV LIDMSIHTAY VKAIRAAQHF IYIENQYFIG
0801: SSYNWNAHKD IGANNLIPME IALKIAEKIR ANERFAAYIV IPMWPEGVPT GAATQRILYW QHKTIQMMYE TIYKALVETG LEGAFSPQDY LNFFCLGNRE
0901: MVDGIDNSGT GSPSNANTPQ ALSRKSRRFM VYVHSKGMVV DDEYVVIGSA NINQRSMEGT RDTEIAMGAY QPQHTWARKH SGPRGQIYGY RMSLWAEHMA
1001: TLDDCFTQPE SIECVRKVRT MGERNWKQFA AEEVSDMRGH LLKYPVEVDR KGKVRPLPGS ETFPDVGGNI VGSFIAIQEN LTI
Arabidopsis Description
PLDBETA1phospholipase D beta 1 [Source:TAIR;Acc:AT2G42010]
SUBAcon: [peroxisome]
SUBAcon: [peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.