Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G208300.2 | Wheat | cytosol | 97.63 | 97.63 |
| HORVU5Hr1G060030.2 | Barley | cytosol | 96.8 | 97.5 |
| TraesCS5A01G202000.1 | Wheat | cytosol | 96.8 | 97.5 |
| EER98315 | Sorghum | cytosol | 86.51 | 87.13 |
| Os07t0260400-01 | Rice | cytosol, plasma membrane | 86.27 | 86.99 |
| Zm00001d005484_P003 | Maize | cytosol | 82.72 | 80.44 |
| GSMUA_Achr7P23470_001 | Banana | cytosol | 67.1 | 72.05 |
| VIT_12s0035g00200.t01 | Wine grape | cytosol, nucleus, peroxisome | 51.01 | 68.2 |
| TraesCS5B01G525600.1 | Wheat | cytosol | 65.68 | 65.45 |
| KRH43039 | Soybean | cytosol | 64.14 | 63.24 |
| KRH59149 | Soybean | cytosol | 63.79 | 62.89 |
| Solyc10g024370.1.1 | Tomato | cytosol | 61.66 | 62.1 |
| PGSC0003DMT400011523 | Potato | cytosol | 60.35 | 59.58 |
| Solyc01g103910.1.1 | Tomato | cytosol | 48.4 | 58.68 |
| TraesCS5B01G336100.1 | Wheat | cytosol | 59.53 | 58.35 |
| TraesCS1B01G195200.1 | Wheat | cytosol | 51.24 | 53.46 |
| TraesCS1B01G382600.1 | Wheat | mitochondrion | 49.7 | 50.72 |
| TraesCS4B01G352300.1 | Wheat | cytosol | 51.36 | 50.64 |
| TraesCS3B01G149100.1 | Wheat | unclear | 44.26 | 46.06 |
| TraesCS6B01G096200.1 | Wheat | cytosol | 46.63 | 45.55 |
| TraesCS4B01G377600.1 | Wheat | cytosol | 43.2 | 44.46 |
| TraesCS1B01G135200.1 | Wheat | cytosol | 42.72 | 44.13 |
| TraesCS7B01G277900.1 | Wheat | plastid | 43.67 | 43.36 |
| TraesCS1B01G393300.3 | Wheat | cytosol | 42.13 | 42.74 |
| TraesCS1B01G050400.1 | Wheat | cytosol | 38.93 | 39.73 |
| TraesCS7B01G468200.1 | Wheat | cytosol | 37.51 | 38.38 |
| TraesCS5B01G222500.1 | Wheat | cytosol | 37.28 | 38.14 |
| TraesCS7B01G468300.1 | Wheat | cytosol | 37.16 | 38.11 |
| TraesCS1B01G242500.1 | Wheat | cytosol, nucleus, peroxisome | 23.55 | 17.59 |
Protein Annotations
| KEGG:00564+3.1.4.4 | KEGG:00565+3.1.4.4 | Gene3D:2.60.40.150 | Gene3D:3.30.870.10 | MapMan:5.7.2.4.3 | InterPro:C2_dom |
| InterPro:C2_domain_sf | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004630 | GO:GO:0005488 | GO:GO:0005509 |
| GO:GO:0005575 | GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016020 |
| GO:GO:0016787 | GO:GO:0046470 | InterPro:IPR000008 | InterPro:IPR001736 | InterPro:IPR035892 | PFAM:PF00168 |
| PFAM:PF00614 | PFAM:PF12357 | PIRSF:PIRSF036470 | InterPro:PLipase_D/transphosphatidylase | InterPro:PLipase_D_C | InterPro:PLipase_D_fam |
| InterPro:PLipase_D_pln | PFscan:PS50004 | PFscan:PS50035 | PANTHER:PTHR18896 | PANTHER:PTHR18896:SF60 | SMART:SM00155 |
| SMART:SM00239 | SUPFAM:SSF49562 | SUPFAM:SSF56024 | EnsemblPlantsGene:TraesCS5B01G200600 | EnsemblPlants:TraesCS5B01G200600.1 | TIGR:cd04015 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr5B:+:362809503..362815725
Molecular Weight (calculated)
95605.0 Da
IEP (calculated)
7.086
GRAVY (calculated)
-0.388
Length
845 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKHSAETGT SMLLHGDLDI QIVEAKCLPN MDLMTERIRK CFTGYGACRS NCGNSNPKPD VRKIITSDPY VSVCLSGATV AQTRVINNSE NPKWDEHFYV
101: QVAHSVSRLE FHVKDDDVFG AELIGVASVP VEQITEGDVV SGWFPISGHY NSPKISPELN LSIQYKPFDQ NPLYKDGVGA GGTENIGVPN AYFPLRKGGR
201: VSLYQDAHVP DDFRPNIEIE GGRTYEQNKC WEDICHAIVE AHHLIYLIGW SLYHPINLLR ESTKPLPNGV PRTIGEILKS KVQEGVRVIV LLWDDKTSHD
301: KFLLKTDGLM HTHDEEARKF FRHSGVHCVL APRYASNKMS IFKQQVVGTL FTHHQKCVIV DTQATGNNRK ITAFLGGLDL CDGRYDTPEH RLFKDLTTVF
401: KDDFHNPTFP VNKSDGPRQP WHDLHCKIEG PAAYDMLTNF EQRWKKSAKW KVSVRRAVSW HHDTLVKINR MSWIVSPSAD ELNAHVCEEN DPENWHVQIF
501: RSIDSGSVKG FPKDVQEAES QNLVCAKNLQ IDKSIHNAYV KAIRSAQHFV YIENQYFIGS SYYWSSHRGA GAENLIPIEL AIKIARKIAA REPFAAYIII
601: PMWPEGNPTT APMQEILYWQ LFYLFKGQTM SMMYKIIADA LRKEGLDDAH PQDYLNFYCL GKREVTAVVP APTSHSNENS PMRLAQKFRR FMIYVHSKGM
701: IIDDEFVLIG SANINQRSLD GLRDTEIAMG AYQPHYSWAG SQGPPRGQVY GYRMSLWAEH LGTVEECFRQ PQSMECVQLV NQMAEDNWAC FVSPQMVDMK
801: GHLMRYPIKV EKDGRVVPLP GHESFPDVGG KVLGSHSSLP NALTT
101: QVAHSVSRLE FHVKDDDVFG AELIGVASVP VEQITEGDVV SGWFPISGHY NSPKISPELN LSIQYKPFDQ NPLYKDGVGA GGTENIGVPN AYFPLRKGGR
201: VSLYQDAHVP DDFRPNIEIE GGRTYEQNKC WEDICHAIVE AHHLIYLIGW SLYHPINLLR ESTKPLPNGV PRTIGEILKS KVQEGVRVIV LLWDDKTSHD
301: KFLLKTDGLM HTHDEEARKF FRHSGVHCVL APRYASNKMS IFKQQVVGTL FTHHQKCVIV DTQATGNNRK ITAFLGGLDL CDGRYDTPEH RLFKDLTTVF
401: KDDFHNPTFP VNKSDGPRQP WHDLHCKIEG PAAYDMLTNF EQRWKKSAKW KVSVRRAVSW HHDTLVKINR MSWIVSPSAD ELNAHVCEEN DPENWHVQIF
501: RSIDSGSVKG FPKDVQEAES QNLVCAKNLQ IDKSIHNAYV KAIRSAQHFV YIENQYFIGS SYYWSSHRGA GAENLIPIEL AIKIARKIAA REPFAAYIII
601: PMWPEGNPTT APMQEILYWQ LFYLFKGQTM SMMYKIIADA LRKEGLDDAH PQDYLNFYCL GKREVTAVVP APTSHSNENS PMRLAQKFRR FMIYVHSKGM
701: IIDDEFVLIG SANINQRSLD GLRDTEIAMG AYQPHYSWAG SQGPPRGQVY GYRMSLWAEH LGTVEECFRQ PQSMECVQLV NQMAEDNWAC FVSPQMVDMK
801: GHLMRYPIKV EKDGRVVPLP GHESFPDVGG KVLGSHSSLP NALTT
0001: MDNHGPRYPY PYGQYPYPYP YPAPYRPPSS EPYPPPPTNQ YSAPYYPYPP PPYATPPPYA SPPPPHQHTS GSHSGPLDYS HNPQPSSLAA APPEYHRHSF
0101: DYQPSPYPYQ PQGNFGAYGP PPPHYSYQEP AQYPPPETKP QEPLPPPQQT QGFQEYRRQD CLSTGGTGHD NVSNSGSSYP PVDELLGGLH ISTNQPGPSV
0201: PQLSSLPSNS WQSRPGDLYG YPNSSFPSNS HLPQLGRVDS SSSYYASTES PHSADMQMTL FGKGSLKVLL LHGNLDIWIY HAKNLPNMDM FHKTLGDMFG
0301: RLPGKIEGQL TSKITSDPYV SVSVAGAVIG RTYVMSNSEN PVWMQHFYVP VAHHAAEVHF VVKDSDVVGS QLIGLVTIPV EQIYSGAKIE GTYPILNSNG
0401: KPCKPGANLS LSIQYTPMDK LSVYHHGVGA GPDYQGVPGT YFPLRKGGTV RLYQDAHVPE GMLPGIRLDN GMSYEHGKCW HDMFDAIRQA RRLIYITGWS
0501: VWHKVKLIRD KLGPASECTL GELLRSKSQE GVRVLLLIWD DPTSRSILGY KTDGVMATHD EETRRFFKHS SVQVLLCPRN AGKRHSWVKQ REVGTIYTHH
0601: QKNVIVDADA GGNRRKIIAF VGGLDLCDGR YDTPQHPLFR TLQTIHKDDF HNPTFTGNLS GCPREPWHDL HSKIDGPAAY DVLTNFEERW LKAAKPSGIK
0701: KFKTSYDDAL LRIDRIPDIL GVSDTPTVSE NDPEAWHVQI FRSIDSNSVK GFPKDPKDAT CKNLVCGKNV LIDMSIHTAY VKAIRAAQHF IYIENQYFIG
0801: SSYNWNAHKD IGANNLIPME IALKIAEKIR ANERFAAYIV IPMWPEGVPT GAATQRILYW QHKTIQMMYE TIYKALVETG LEGAFSPQDY LNFFCLGNRE
0901: MVDGIDNSGT GSPSNANTPQ ALSRKSRRFM VYVHSKGMVV DDEYVVIGSA NINQRSMEGT RDTEIAMGAY QPQHTWARKH SGPRGQIYGY RMSLWAEHMA
1001: TLDDCFTQPE SIECVRKVRT MGERNWKQFA AEEVSDMRGH LLKYPVEVDR KGKVRPLPGS ETFPDVGGNI VGSFIAIQEN LTI
0101: DYQPSPYPYQ PQGNFGAYGP PPPHYSYQEP AQYPPPETKP QEPLPPPQQT QGFQEYRRQD CLSTGGTGHD NVSNSGSSYP PVDELLGGLH ISTNQPGPSV
0201: PQLSSLPSNS WQSRPGDLYG YPNSSFPSNS HLPQLGRVDS SSSYYASTES PHSADMQMTL FGKGSLKVLL LHGNLDIWIY HAKNLPNMDM FHKTLGDMFG
0301: RLPGKIEGQL TSKITSDPYV SVSVAGAVIG RTYVMSNSEN PVWMQHFYVP VAHHAAEVHF VVKDSDVVGS QLIGLVTIPV EQIYSGAKIE GTYPILNSNG
0401: KPCKPGANLS LSIQYTPMDK LSVYHHGVGA GPDYQGVPGT YFPLRKGGTV RLYQDAHVPE GMLPGIRLDN GMSYEHGKCW HDMFDAIRQA RRLIYITGWS
0501: VWHKVKLIRD KLGPASECTL GELLRSKSQE GVRVLLLIWD DPTSRSILGY KTDGVMATHD EETRRFFKHS SVQVLLCPRN AGKRHSWVKQ REVGTIYTHH
0601: QKNVIVDADA GGNRRKIIAF VGGLDLCDGR YDTPQHPLFR TLQTIHKDDF HNPTFTGNLS GCPREPWHDL HSKIDGPAAY DVLTNFEERW LKAAKPSGIK
0701: KFKTSYDDAL LRIDRIPDIL GVSDTPTVSE NDPEAWHVQI FRSIDSNSVK GFPKDPKDAT CKNLVCGKNV LIDMSIHTAY VKAIRAAQHF IYIENQYFIG
0801: SSYNWNAHKD IGANNLIPME IALKIAEKIR ANERFAAYIV IPMWPEGVPT GAATQRILYW QHKTIQMMYE TIYKALVETG LEGAFSPQDY LNFFCLGNRE
0901: MVDGIDNSGT GSPSNANTPQ ALSRKSRRFM VYVHSKGMVV DDEYVVIGSA NINQRSMEGT RDTEIAMGAY QPQHTWARKH SGPRGQIYGY RMSLWAEHMA
1001: TLDDCFTQPE SIECVRKVRT MGERNWKQFA AEEVSDMRGH LLKYPVEVDR KGKVRPLPGS ETFPDVGGNI VGSFIAIQEN LTI
Arabidopsis Description
PLDBETA1phospholipase D beta 1 [Source:TAIR;Acc:AT2G42010]
SUBAcon: [peroxisome]
SUBAcon: [peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.