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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 2
  • mitochondrion 1
  • cytoskeleton 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytoskeleton, cytosol, mitochondrion
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytoskeleton
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS4A01G137900.1
TraesCS4B01G148100.1
TraesCS4D01G153300.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G11850.1 TraesCS4A01G137900.1 AT4G26630.1 25387881
AT4G11850.1 TraesCS4B01G148100.1 AT4G26630.1 25387881
AT4G11850.1 TraesCS4D01G153300.1 AT4G26630.1 25387881
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS4D01G346700.1 Wheat cytosol 95.68 98.68
TraesCS5A01G520900.1 Wheat cytosol 94.87 97.83
HORVU4Hr1G085550.2 Barley cytosol 91.02 93.86
KXG40331 Sorghum cytosol 76.08 78.93
Zm00001d027386_P002 Maize cytosol 75.38 77.46
Os03t0119100-01 Rice plasma membrane 75.03 77.01
TraesCS1B01G195200.1 Wheat cytosol 70.95 75.06
Zm00001d050470_P001 Maize mitochondrion 33.72 72.61
PGSC0003DMT400000378 Potato cytosol 21.7 70.99
PGSC0003DMT400026602 Potato cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole 24.97 69.93
TraesCS1B01G382600.1 Wheat mitochondrion 66.74 69.08
CDY41006 Canola mitochondrion 12.49 68.59
GSMUA_Achr8P12030_001 Banana plastid 62.31 66.42
CDY28756 Canola cytosol, extracellular 9.68 65.87
Bra022740.1-P Field mustard cytosol, extracellular 9.68 65.87
KRG89825 Soybean cytoskeleton, cytosol, peroxisome 22.29 65.64
CDY13283 Canola mitochondrion 26.84 65.16
Bra000752.1-P Field mustard cytosol, nucleus, peroxisome 38.16 62.17
VIT_02s0025g04620.t01 Wine grape cytosol 61.38 61.88
CDX86742 Canola cytosol 60.91 61.63
Bra014871.1-P Field mustard cytosol 60.79 61.51
Solyc08g080130.2.1 Tomato nucleus 60.56 61.35
PGSC0003DMT400058531 Potato plastid 60.44 61.01
Zm00001d015818_P002 Maize cytosol, nucleus, peroxisome 19.6 60.65
AT4G11850.1 Thale cress cytosol 60.44 60.37
CDY64184 Canola mitochondrion 57.29 60.25
Solyc01g091910.2.1 Tomato plastid 62.54 59.89
CDX90807 Canola cytosol 56.36 59.85
KRH77467 Soybean nucleus 59.39 59.67
AT4G11830.2 Thale cress cytosol 59.16 59.23
AT4G11840.1 Thale cress cytosol 59.51 58.89
Bra000753.1-P Field mustard cytosol 53.79 58.06
CDX90808 Canola cytosol 53.44 57.68
CDY13284 Canola cytosol 30.57 57.08
AT4G00240.1 Thale cress cytosol 60.91 56.31
KRG93706 Soybean nucleus 18.9 55.67
CDX90066 Canola cytosol 62.43 54.93
GSMUA_Achr5P20150_001 Banana cytosol 63.71 54.76
CDY52961 Canola cytosol, nucleus, peroxisome 61.61 53.23
KRH65182 Soybean cytosol 46.91 52.96
KRH77470 Soybean cytosol 8.4 52.55
CDY54926 Canola cytosol, nucleus, peroxisome 61.49 52.54
TraesCS5B01G200600.1 Wheat cytosol 50.64 51.36
TraesCS5B01G525600.1 Wheat cytosol 50.41 50.94
CDY15144 Canola peroxisome 62.66 50.47
TraesCS5B01G336100.1 Wheat cytosol 50.76 50.46
Bra033225.1-P Field mustard cytosol 62.66 50.19
KRH48290 Soybean nucleus 61.26 50.14
KRH77469 Soybean nucleus 3.97 48.57
CDY46254 Canola cytosol 5.48 48.45
VIT_15s0048g01160.t01 Wine grape cytosol 61.14 48.21
AT2G42010.2 Thale cress peroxisome 62.19 48.1
KRH01625 Soybean cytosol 61.26 47.86
KRH70487 Soybean cytosol 61.14 47.38
Solyc10g017650.1.1 Tomato cytosol 60.91 46.65
TraesCS3B01G149100.1 Wheat unclear 41.66 43.97
TraesCS7B01G277900.1 Wheat plastid 43.52 43.83
TraesCS4B01G377600.1 Wheat cytosol 41.89 43.73
TraesCS1B01G135200.1 Wheat cytosol 40.84 42.79
TraesCS6B01G096200.1 Wheat cytosol 42.71 42.31
TraesCS1B01G393300.3 Wheat cytosol 39.79 40.94
TraesCS7B01G468300.1 Wheat cytosol 39.21 40.78
TraesCS1B01G050400.1 Wheat cytosol 39.21 40.58
TraesCS7B01G468200.1 Wheat cytosol 39.09 40.56
TraesCS5B01G222500.1 Wheat cytosol 37.69 39.1
Bra008515.1-P Field mustard mitochondrion, plastid 61.61 36.41
TraesCS1B01G242500.1 Wheat cytosol, nucleus, peroxisome 21.82 16.53
Protein Annotations
KEGG:00564+3.1.4.4KEGG:00565+3.1.4.4Gene3D:2.60.40.150Gene3D:3.30.870.10MapMan:50.3.1InterPro:C2_dom
InterPro:C2_domain_sfGO:GO:0003674GO:GO:0003824GO:GO:0004630GO:GO:0005488GO:GO:0005509
GO:GO:0005575GO:GO:0006629GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016020
GO:GO:0016787GO:GO:0046470InterPro:IPR000008InterPro:IPR001736InterPro:IPR035892PFAM:PF00168
PFAM:PF00614PFAM:PF12357PIRSF:PIRSF036470InterPro:PLipase_D/transphosphatidylaseInterPro:PLipase_D_CInterPro:PLipase_D_fam
InterPro:PLipase_D_plnPFscan:PS50004PFscan:PS50035PANTHER:PTHR18896PANTHER:PTHR18896:SF61SMART:SM00155
SMART:SM00239SUPFAM:SSF49562SUPFAM:SSF56024EnsemblPlantsGene:TraesCS4B01G352300EnsemblPlants:TraesCS4B01G352300.1TIGR:cd04015
Description
No Description!
Coordinates
chr4B:-:644372067..644375811
Molecular Weight (calculated)
96301.3 Da
IEP (calculated)
6.984
GRAVY (calculated)
-0.376
Length
857 amino acids
Sequence
(BLAST)
001: MSDDEDCRTT AALLASTSCN HRAVLLHGSL DIWIDEACNL PNKDILSNTM GGLLKSCTSD PGAKSTSDPY VTVLVASATV ARTFVIQDDE NPKWRQHFLV
101: PVAHETAAVS FVVKDSDVIG AELIGAVAIP AESLLAGDRV DGVYPVLEPS GKPCRPGATL RMSVQYVPVA RLTMYSHGVT PGPDFPGVPN TYFPLRRGGR
201: VTLYQDAHVP GDGQCLPEIR LGNGQLYRHG QCWHDVYDAM SQAKHLIYIT GWSVFHTIHL VRDGDKARPL GDLLKKKSQE GVRVLLLVWD DPTSRSVLGI
301: QMEGYMGTRD EETRRFFKHS SVQILLCSRS AGKRHSWVKQ KETGTIFTHH QKTVIIDVDA GNGKRKIVAF VGGLDLCGGR YDTPRHHLFH TLHTVHKEDY
401: YNPNFAVTDE RGPREPWHDL HSKIDGPAAF DVLKNFEERW SKSSKRHGSK KLSKSCNDTL LWIEKISEIA AIDDDVYSND NDTERWDVQI FRSIDSNSVK
501: AFPKDPREAT IQNLVCGKNV LIDMSIHTAY VTAIRAAQHF IYIENQYFLG SSFQWDSHRD LGANNLIPIE VALKIANKIY ANERFSAYII IPMWPEGNPT
601: GAPTQRILYW QKKTMQMMYE IVYKALKDTG LNGSYDPQDY LNFFCLGNRE AVENAAFSEA FSHTNPQDQA RKNRRFMVYV HSKGMIVDDE YVIIGSANIN
701: QRSMEGTRDT EIAMGAYQPH YTWSNMFSAP RGQATNQPTN QIHPLIHHRE SDERIGMLLQ IYGYRMSLWA EHIGGVEAVF ERPDTLECVR RVRGIGDANW
801: KRFVAEEVTE MRGHLIRYPV AVEWNGKVGP LQGCAAFPDV GGNICGSFSG IQENLTI
Best Arabidopsis Sequence Match ( AT2G42010.1 )
(BLAST)
0001: MDNHGPRYPY PYGQYPYPYP YPAPYRPPSS EPYPPPPTNQ YSAPYYPYPP PPYATPPPYA SPPPPHQHTS GSHSGPLDYS HNPQPSSLAA APPEYHRHSF
0101: DYQPSPYPYQ PQGNFGAYGP PPPHYSYQEP AQYPPPETKP QEPLPPPQQT QGFQEYRRQD CLSTGGTGHD NVSNSGSSYP PVDELLGGLH ISTNQPGPSV
0201: PQLSSLPSNS WQSRPGDLYG YPNSSFPSNS HLPQLGRVDS SSSYYASTES PHSADMQMTL FGKGSLKVLL LHGNLDIWIY HAKNLPNMDM FHKTLGDMFG
0301: RLPGKIEGQL TSKITSDPYV SVSVAGAVIG RTYVMSNSEN PVWMQHFYVP VAHHAAEVHF VVKDSDVVGS QLIGLVTIPV EQIYSGAKIE GTYPILNSNG
0401: KPCKPGANLS LSIQYTPMDK LSVYHHGVGA GPDYQGVPGT YFPLRKGGTV RLYQDAHVPE GMLPGIRLDN GMSYEHGKCW HDMFDAIRQA RRLIYITGWS
0501: VWHKVKLIRD KLGPASECTL GELLRSKSQE GVRVLLLIWD DPTSRSILGY KTDGVMATHD EETRRFFKHS SVQVLLCPRN AGKRHSWVKQ REVGTIYTHH
0601: QKNVIVDADA GGNRRKIIAF VGGLDLCDGR YDTPQHPLFR TLQTIHKDDF HNPTFTGNLS GCPREPWHDL HSKIDGPAAY DVLTNFEERW LKAAKPSGIK
0701: KFKTSYDDAL LRIDRIPDIL GVSDTPTVSE NDPEAWHVQI FRSIDSNSVK GFPKDPKDAT CKNLVCGKNV LIDMSIHTAY VKAIRAAQHF IYIENQYFIG
0801: SSYNWNAHKD IGANNLIPME IALKIAEKIR ANERFAAYIV IPMWPEGVPT GAATQRILYW QHKTIQMMYE TIYKALVETG LEGAFSPQDY LNFFCLGNRE
0901: MVDGIDNSGT GSPSNANTPQ ALSRKSRRFM VYVHSKGMVV DDEYVVIGSA NINQRSMEGT RDTEIAMGAY QPQHTWARKH SGPRGQIYGY RMSLWAEHMA
1001: TLDDCFTQPE SIECVRKVRT MGERNWKQFA AEEVSDMRGH LLKYPVEVDR KGKVRPLPGS ETFPDVGGNI VGSFIAIQEN LTI
Arabidopsis Description
PLDBETA1phospholipase D beta 1 [Source:TAIR;Acc:AT2G42010]
SUBAcon: [peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.