Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 1
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY13283 | Canola | mitochondrion | 38.81 | 94.33 |
| Bra014871.1-P | Field mustard | cytosol | 92.42 | 93.62 |
| CDX86742 | Canola | cytosol | 92.42 | 93.62 |
| AT4G11840.1 | Thale cress | cytosol | 93.47 | 92.61 |
| CDY13284 | Canola | cytosol | 49.3 | 92.16 |
| AT4G11830.2 | Thale cress | cytosol | 90.44 | 90.65 |
| CDY41006 | Canola | mitochondrion | 16.43 | 90.38 |
| CDY28756 | Canola | cytosol, extracellular | 12.24 | 83.33 |
| Bra022740.1-P | Field mustard | cytosol, extracellular | 12.24 | 83.33 |
| CDY46254 | Canola | cytosol | 8.86 | 78.35 |
| VIT_02s0025g04620.t01 | Wine grape | cytosol | 69.35 | 70.0 |
| Solyc08g080130.2.1 | Tomato | nucleus | 68.41 | 69.39 |
| PGSC0003DMT400058531 | Potato | plastid | 68.53 | 69.26 |
| TraesCS1D01G189300.1 | Wheat | cytosol | 65.27 | 69.14 |
| TraesCS1B01G195200.1 | Wheat | cytosol | 64.92 | 68.77 |
| KRH77467 | Soybean | nucleus | 66.67 | 67.06 |
| GSMUA_Achr8P12030_001 | Banana | plastid | 62.12 | 66.29 |
| TraesCS1A01G365100.2 | Wheat | mitochondrion | 62.24 | 64.49 |
| KRH77469 | Soybean | nucleus | 5.24 | 64.29 |
| TraesCS1D01G370600.1 | Wheat | cytosol | 61.89 | 64.13 |
| KXG40331 | Sorghum | cytosol | 61.54 | 63.92 |
| TraesCS1B01G382600.1 | Wheat | mitochondrion | 61.66 | 63.89 |
| Os03t0119100-01 | Rice | plasma membrane | 61.66 | 63.35 |
| Zm00001d027386_P002 | Maize | cytosol | 61.54 | 63.31 |
| HORVU4Hr1G085550.2 | Barley | cytosol | 61.19 | 63.18 |
| TraesCS4D01G346700.1 | Wheat | cytosol | 60.96 | 62.94 |
| HORVU1Hr1G079150.1 | Barley | cytosol | 60.72 | 62.92 |
| KRG93706 | Soybean | nucleus | 21.21 | 62.54 |
| TraesCS5A01G520900.1 | Wheat | cytosol | 60.49 | 62.45 |
| Zm00001d050470_P001 | Maize | mitochondrion | 28.79 | 62.06 |
| AT4G00240.1 | Thale cress | cytosol | 66.43 | 61.49 |
| GSMUA_Achr4P24890_001 | Banana | cytosol, plastid | 62.47 | 60.56 |
| TraesCS4B01G352300.1 | Wheat | cytosol | 60.37 | 60.44 |
| KRH77470 | Soybean | cytosol | 9.32 | 58.39 |
| GSMUA_Achr5P20150_001 | Banana | cytosol | 65.27 | 56.17 |
| Zm00001d015818_P002 | Maize | cytosol, nucleus, peroxisome | 17.48 | 54.15 |
| AT2G42010.2 | Thale cress | peroxisome | 69.35 | 53.7 |
| Zm00001d029684_P001 | Maize | peroxisome | 64.45 | 52.77 |
| Zm00001d015256_P001 | Maize | cytosol | 25.41 | 52.66 |
| EER92041 | Sorghum | cytosol, nucleus, peroxisome | 64.57 | 52.61 |
| Os10t0524400-01 | Rice | plasma membrane | 64.1 | 52.58 |
| TraesCS1A01G187400.1 | Wheat | peroxisome | 65.85 | 51.04 |
| HORVU1Hr1G048970.1 | Barley | cytosol, nucleus, peroxisome | 65.38 | 50.59 |
| AT4G35790.1 | Thale cress | cytosol | 50.82 | 50.23 |
| AT3G15730.1 | Thale cress | cytosol | 42.66 | 45.19 |
| AT1G52570.1 | Thale cress | cytosol | 42.42 | 44.94 |
| AT5G25370.2 | Thale cress | cytosol | 41.49 | 43.41 |
| AT1G55180.1 | Thale cress | cytosol | 34.97 | 39.37 |
| AT3G05630.1 | Thale cress | cytosol | 21.56 | 17.69 |
| AT3G16785.4 | Thale cress | plastid | 21.56 | 16.24 |
Protein Annotations
| KEGG:00564+3.1.4.4 | KEGG:00565+3.1.4.4 | Gene3D:2.60.40.150 | Gene3D:3.30.870.10 | MapMan:5.7.2.4.2 | EntrezGene:826791 |
| ProteinID:AEE83058.1 | EMBL:AF027408 | ArrayExpress:AT4G11850 | EnsemblPlantsGene:AT4G11850 | RefSeq:AT4G11850 | TAIR:AT4G11850 |
| RefSeq:AT4G11850-TAIR-G | EnsemblPlants:AT4G11850.1 | TAIR:AT4G11850.1 | EMBL:AY099569 | EMBL:BT002140 | InterPro:C2_dom |
| InterPro:C2_domain_sf | ProteinID:CAB44323.1 | ProteinID:CAB78228.1 | GO:GO:0000003 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004630 | GO:GO:0005488 | GO:GO:0005509 | GO:GO:0005515 | GO:GO:0005546 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005886 | GO:GO:0006629 | GO:GO:0006643 |
| GO:GO:0006950 | GO:GO:0006979 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008289 |
| GO:GO:0009056 | GO:GO:0009790 | GO:GO:0009791 | GO:GO:0009793 | GO:GO:0009987 | GO:GO:0010044 |
| GO:GO:0016020 | GO:GO:0016042 | GO:GO:0016787 | GO:GO:0046470 | GO:GO:0070290 | InterPro:IPR000008 |
| InterPro:IPR001736 | InterPro:IPR035892 | RefSeq:NP_192922.1 | PFAM:PF00168 | PFAM:PF00614 | PFAM:PF12357 |
| PIRSF:PIRSF036470 | Symbol:PLDGAMMA1 | InterPro:PLipase_D/transphosphatidylase | InterPro:PLipase_D_C | InterPro:PLipase_D_fam | InterPro:PLipase_D_pln |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0005052 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PFscan:PS50004 | PFscan:PS50035 | PANTHER:PTHR18896 |
| PANTHER:PTHR18896:SF65 | UniProt:Q9T053 | SMART:SM00155 | SMART:SM00239 | SUPFAM:SSF49562 | SUPFAM:SSF56024 |
| UniParc:UPI00000011A2 | SEG:seg | : | : | : | : |
Description
PLDGAMMA1Phospholipase D gamma 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9T053]
Coordinates
chr4:-:7129123..7133385
Molecular Weight (calculated)
95593.3 Da
IEP (calculated)
8.266
GRAVY (calculated)
-0.345
Length
858 amino acids
Sequence
(BLAST)
(BLAST)
001: MAYHPAYTET MSMGGGSSHG GGQQYVPFAT SSGSLRVELL HGNLDIWVKE AKHLPNMDGF HNRLGGMLSG LGRKKVEGEK SSKITSDPYV TVSISGAVIG
101: RTFVISNSEN PVWMQHFDVP VAHSAAEVHF VVKDSDIIGS QIMGAVGIPT EQLCSGNRIE GLFPILNSSG KPCKQGAVLG LSIQYTPMER MRLYQMGVGS
201: GNECVGVPGT YFPLRKGGRV TLYQDAHVDD GTLPSVHLDG GIQYRHGKCW EDMADAIRQA RRLIYITGWS VFHPVRLVRR TNDPTEGTLG ELLKVKSQEG
301: VRVLVLVWDD PTSRSLLGFK TQGVMNTSDE ETRRFFKHSS VQVLLCPRSG GKGHSFIKKS EVGTIYTHHQ KTVIVDAEAA QNRRKIVAFV GGLDLCNGRF
401: DTPKHPLFRT LKTLHKDDFH NPNFVTTADD GPREPWHDLH SKIDGPAAYD VLANFEERWM KASKPRGIGK LKSSSDDSLL RIDRIPDIVG LSEASSANDN
501: DPESWHVQVF RSIDSSSVKG FPKDPKEATG RNLLCGKNIL IDMSIHAAYV KAIRSAQHFI YIENQYFLGS SFNWDSNKDL GANNLIPMEI ALKIANKIRA
601: REKFAAYIVI PMWPEGAPTS NPIQRILYWQ HKTMQMMYQT IYKALVEVGL DSQFEPQDFL NFFCLGTREV PVGTVSVYNS PRKPPQPNAN ANAAQVQALK
701: SRRFMIYVHS KGMVVDDEFV LIGSANINQR SLEGTRDTEI AMGGYQPHYS WAMKGSRPHG QIFGYRMSLW AEHLGFLEQG FEEPENMECV RRVRQLSELN
801: WRQYAAEEVT EMSGHLLKYP VQVDRTGKVS SLPGCETFPD LGGKIIGSFL ALQENLTI
101: RTFVISNSEN PVWMQHFDVP VAHSAAEVHF VVKDSDIIGS QIMGAVGIPT EQLCSGNRIE GLFPILNSSG KPCKQGAVLG LSIQYTPMER MRLYQMGVGS
201: GNECVGVPGT YFPLRKGGRV TLYQDAHVDD GTLPSVHLDG GIQYRHGKCW EDMADAIRQA RRLIYITGWS VFHPVRLVRR TNDPTEGTLG ELLKVKSQEG
301: VRVLVLVWDD PTSRSLLGFK TQGVMNTSDE ETRRFFKHSS VQVLLCPRSG GKGHSFIKKS EVGTIYTHHQ KTVIVDAEAA QNRRKIVAFV GGLDLCNGRF
401: DTPKHPLFRT LKTLHKDDFH NPNFVTTADD GPREPWHDLH SKIDGPAAYD VLANFEERWM KASKPRGIGK LKSSSDDSLL RIDRIPDIVG LSEASSANDN
501: DPESWHVQVF RSIDSSSVKG FPKDPKEATG RNLLCGKNIL IDMSIHAAYV KAIRSAQHFI YIENQYFLGS SFNWDSNKDL GANNLIPMEI ALKIANKIRA
601: REKFAAYIVI PMWPEGAPTS NPIQRILYWQ HKTMQMMYQT IYKALVEVGL DSQFEPQDFL NFFCLGTREV PVGTVSVYNS PRKPPQPNAN ANAAQVQALK
701: SRRFMIYVHS KGMVVDDEFV LIGSANINQR SLEGTRDTEI AMGGYQPHYS WAMKGSRPHG QIFGYRMSLW AEHLGFLEQG FEEPENMECV RRVRQLSELN
801: WRQYAAEEVT EMSGHLLKYP VQVDRTGKVS SLPGCETFPD LGGKIIGSFL ALQENLTI
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.