Factsheet for Zm00001d015256_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d013757_P010
Zm00001d033159_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G11850.1	Zm00001d013757_P010	AT4G26630.1	25387881
AT4G11850.1	Zm00001d033159_P001	AT4G26630.1	25387881

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH77469	Soybean	nucleus	9.18	54.29
Zm00001d015818_P002	Maize	cytosol, nucleus, peroxisome	32.37	48.38
KRG89825	Soybean	cytoskeleton, cytosol, peroxisome	32.85	46.74
CDY41006	Canola	mitochondrion	16.91	44.87
CDY28756	Canola	cytosol, extracellular	12.32	40.48
Bra022740.1-P	Field mustard	cytosol, extracellular	12.32	40.48
CDY13283	Canola	mitochondrion	32.13	37.68
PGSC0003DMT400026602	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	27.78	37.58
Zm00001d050470_P001	Maize	mitochondrion	34.06	35.43
Zm00001d027386_P002	Maize	cytosol	69.32	34.41
Bra000752.1-P	Field mustard	cytosol, nucleus, peroxisome	43.24	34.03
PGSC0003DMT400000378	Potato	cytosol	21.01	33.21
KRG93706	Soybean	nucleus	22.71	32.3
TraesCS1D01G370600.1	Wheat	cytosol	58.94	29.47
GSMUA_Achr8P12030_001	Banana	plastid	57.0	29.35
TraesCS1B01G382600.1	Wheat	mitochondrion	58.45	29.23
TraesCS1A01G365100.2	Wheat	mitochondrion	57.97	28.99
HORVU1Hr1G079150.1	Barley	cytosol	57.25	28.62
KRH65182	Soybean	cytosol	47.58	25.96
Solyc08g080130.2.1	Tomato	nucleus	52.9	25.89
CDX90808	Canola	cytosol	49.52	25.82
Bra000753.1-P	Field mustard	cytosol	49.28	25.69
CDX86742	Canola	cytosol	52.42	25.62
PGSC0003DMT400058531	Potato	plastid	52.42	25.56
VIT_02s0025g04620.t01	Wine grape	cytosol	52.42	25.53
Bra014871.1-P	Field mustard	cytosol	52.17	25.5
AT4G11830.2	Thale cress	cytosol	52.66	25.47
AT4G11850.1	Thale cress	cytosol	52.66	25.41
KRH77467	Soybean	nucleus	52.17	25.32
CDX90807	Canola	cytosol	49.28	25.28
AT4G11840.1	Thale cress	cytosol	52.42	25.06
CDY64184	Canola	mitochondrion	49.28	25.03
Solyc01g091910.2.1	Tomato	plastid	53.86	24.92
KRH77470	Soybean	cytosol	8.21	24.82
Zm00001d006262_P001	Maize	cytoskeleton, cytosol, peroxisome	9.18	24.68
AT4G00240.1	Thale cress	cytosol	52.66	23.52
GSMUA_Achr5P20150_001	Banana	cytosol	56.52	23.47
CDX90066	Canola	cytosol	54.11	23.0
Zm00001d029684_P001	Maize	peroxisome	57.0	22.52
CDY52961	Canola	cytosol, nucleus, peroxisome	53.14	22.18
CDY54926	Canola	cytosol, nucleus, peroxisome	53.14	21.93
KRH48290	Soybean	nucleus	53.62	21.2
Zm00001d006257_P009	Maize	cytosol	43.72	21.14
CDY15144	Canola	peroxisome	54.11	21.05
Zm00001d023573_P002	Maize	plastid	18.36	20.99
Bra033225.1-P	Field mustard	cytosol	54.11	20.93
Zm00001d022594_P002	Maize	cytosol	43.96	20.57
VIT_15s0048g01160.t01	Wine grape	cytosol	53.62	20.42
KRH01625	Soybean	cytosol	54.11	20.42
AT2G42010.2	Thale cress	peroxisome	54.35	20.31
KRH70487	Soybean	cytosol	54.11	20.25
Zm00001d046508_P001	Maize	cytosol, mitochondrion, plasma membrane	39.86	20.22
Zm00001d039670_P004	Maize	cytosol	39.37	20.07
Zm00001d005770_P001	Maize	cytosol	36.23	19.82
Solyc10g017650.1.1	Tomato	cytosol	53.38	19.75
Zm00001d008727_P002	Maize	cytosol	38.16	19.46
Zm00001d005484_P003	Maize	cytosol	40.82	19.45
Zm00001d015033_P001	Maize	extracellular, plastid, vacuole	42.27	18.8
Zm00001d029397_P001	Maize	cytosol, mitochondrion, peroxisome	37.92	18.32
Zm00001d037643_P001	Maize	cytosol	37.92	17.33
Bra008515.1-P	Field mustard	mitochondrion, plastid	53.38	15.24
CDY13284	Canola	cytosol	12.32	11.11
Zm00001d009075_P001	Maize	cytosol, nucleus, peroxisome	21.98	9.59
Zm00001d037946_P001	Maize	cytosol, mitochondrion, nucleus, peroxisome	22.22	7.94
CDY46254	Canola	cytosol	0.0	0.0

Protein Annotations

KEGG:00564+3.1.4.4	KEGG:00565+3.1.4.4	Gene3D:3.30.870.10	MapMan:35.1	UniProt:A0A1D6H0S9	ProteinID:AQK68500.1
GO:GO:0000139	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005794	GO:GO:0008150	GO:GO:0009987	GO:GO:0015018	GO:GO:0016020
GO:GO:0016043	GO:GO:0016740	GO:GO:0071555	InterPro:Glyco_trans_43	InterPro:IPR001736	InterPro:IPR029044
InterPro:Nucleotide-diphossugar_trans	PFAM:PF00614	PFAM:PF03360	InterPro:PLipase_D/transphosphatidylase	InterPro:PLipase_D_fam	PFscan:PS50035
PANTHER:PTHR18896	PANTHER:PTHR18896:SF61	SMART:SM00155	SUPFAM:SSF53448	SUPFAM:SSF56024	UniParc:UPI00084564F4
EnsemblPlantsGene:Zm00001d015256	EnsemblPlants:Zm00001d015256_P001	EnsemblPlants:Zm00001d015256_T001	SEG:seg	:	:

Description

Phospholipase D beta 1

Coordinates

chr5:+:81457700..81460503

Molecular Weight (calculated)

47724.3 Da

IEP (calculated)

5.484

GRAVY (calculated)

-0.602

Length

414 amino acids

Sequence
(BLAST)

001: MLWKEADGKP DWVKDLDAVG ENGEEIENPL TQLNDPSSVE PLGNCGKKVI LWWLRVEARA DSKFPEWNLV AILLDPHVPI IYSQVEDARG PREPWHDLHS
101: KIDGPEAYDV LKNFEERWLK ASKRSAAKKL SKLSRSHNDS LLWINKIPDI ISIDDEIYSN DDDPERWDMQ IFRSIDSNSV KGFPKDPREA TKSCLWENVL
201: IDMSVHTTYV NAIRGAQHFI YIENQYFLGS SFNWDSHRDV GEHKNLLLPY DHLKFPKFRT VKYSTLQKMT MQIMYEIIYK AMKEVGLDGT YEPQDYLNFF
301: CLGNREAEDT TCTSSGPFST SNPQKCPKLK EVLISPEKYN YAAAWISNQD QARNNRRFMV YVHSKGMIVD DEYVIIGSAN INQRSMEGTR DTEIAMAAYQ
401: PQHTLANMLS APRG

Best Arabidopsis Sequence Match ( AT2G42010.2 )
(BLAST)

0001: MDNHGPRYPY PYGQYPYPYP YPAPYRPPSS EPYPPPPTNQ YSAPYYPYPP PPYATPPPYA SPPPPHQHTS GSHSGPLDYS HNPQPSSLAA APPEYHRHSF
0101: DYQPSPYPYQ PQGNFGAYGP PPPHYSYQEP AQYPPPETKP QEPLPPPQQT QGFQEYRRQD CLSTGGTGHD NVSNSGSSYP PVDELLGGLH ISTNQPGPSV
0201: PQLSSLPSNS WQSRPGDLYG YPNSSFPSNS HLPQLGRVDS SSSYYASTES PHSADMQMTL FGKGSLKVLL LHGNLDIWIY HAKNLPNMDM FHKTLGDMFG
0301: RLPGKIEGQL TSKITSDPYV SVSVAGAVIG RTYVMSNSEN PVWMQHFYVP VAHHAAEVHF VVKDSDVVGS QLIGLVTIPV EQIYSGAKIE GTYPILNSNG
0401: KPCKPGANLS LSIQYTPMDK LSVYHHGVGA GPDYQGVPGT YFPLRKGGTV RLYQDAHVPE GMLPGIRLDN GMSYEHGKCW HDMFDAIRQA RRLIYITGWS
0501: VWHKVKLIRD KLGPASECTL GELLRSKSQE GVRVLLLIWD DPTSRSILGY KTDGVMATHD EETRRFFKHS SVQVLLCPRN AGKRHSWVKQ REVGTIYTHH
0601: QKNVIVDADA GGNRRKIIAF VGGLDLCDGR YDTPQHPLFR TLQTIHKDDF HNPTFTGNLS GCPREPWHDL HSKIDGPAAY DVLTNFEERW LKAAKPSGIK
0701: KFKTSYDDAL LRIDRIPDIL GVSDTPTVSE NDPEAWHVQI FRSIDSNSVK GFPKDPKDAT CKNLVCGKNV LIDMSIHTAY VKAIRAAQHF IYIENQYFIG
0801: SSYNWNAHKD IGANNLIPME IALKIAEKIR ANERFAAYIV IPMWPEGVPT GAATQRILYW QHKTIQMMYE TIYKALVETG LEGAFSPQDY LNFFCLGNRE
0901: MVDGIDNSGT GSPSNANTPQ VTKRRECLLL KFLMFLKRGV PVVLQALSRK SRRFMVYVHS KGMVVDDEYV VIGSANINQR SMEGTRDTEI AMGAYQPQHT
1001: WARKHSGPRG QIYGYRMSLW AEHMATLDDC FTQPESIECV RKVRTMGERN WKQFAAEEVS DMRGHLLKYP VEVDRKGKVR PLPGSETFPD VGGNIVGSFI
1101: AIQENLTI

Arabidopsis Description

PLDBETA1phospholipase D beta 1 [Source:TAIR;Acc:AT2G42010]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.