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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 2
  • plasma membrane 1
  • golgi 1
  • plastid 2
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:cytosol, mitochondrion, plastid, secretory
BaCelLo:secretory
EpiLoc:vacuole
iPSORT:plastid
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
 nucleus: 21132161
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH65182 Soybean cytosol 65.33 90.12
KRG89825 Soybean cytoskeleton, cytosol, peroxisome 23.97 86.25
PGSC0003DMT400000378 Potato cytosol 20.25 80.92
PGSC0003DMT400026602 Potato cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole 23.5 80.39
KRH01625 Soybean cytosol 75.36 71.92
CDX90066 Canola cytosol 66.76 71.77
Solyc01g091910.2.1 Tomato plastid 61.13 71.51
KRH70487 Soybean cytosol 74.88 70.89
AT4G00240.1 Thale cress cytosol 62.56 70.66
GSMUA_Achr8P12030_001 Banana plastid 54.25 70.65
TraesCS1B01G195200.1 Wheat cytosol 54.44 70.37
TraesCS1D01G189300.1 Wheat cytosol 54.25 70.12
KRH77467 Soybean nucleus 56.06 68.82
CDY52961 Canola cytosol, nucleus, peroxisome 64.37 67.94
CDY54926 Canola cytosol, nucleus, peroxisome 64.66 67.5
CDY15144 Canola peroxisome 68.58 67.48
Bra033225.1-P Field mustard cytosol 68.67 67.2
VIT_15s0048g01160.t01 Wine grape cytosol 69.53 66.97
KXG40331 Sorghum cytosol 51.86 65.74
KRH77469 Soybean nucleus 4.39 65.71
TraesCS1B01G382600.1 Wheat mitochondrion 51.86 65.58
TraesCS1D01G370600.1 Wheat cytosol 51.77 65.46
AT2G42010.2 Thale cress peroxisome 69.25 65.43
Zm00001d027386_P002 Maize cytosol 51.86 65.11
TraesCS1A01G365100.2 Wheat mitochondrion 51.48 65.1
Os03t0119100-01 Rice plasma membrane 51.86 65.03
HORVU1Hr1G079150.1 Barley cytosol 50.91 64.37
TraesCS4D01G346700.1 Wheat cytosol 50.81 64.02
HORVU4Hr1G085550.2 Barley cytosol 50.33 63.42
TraesCS5A01G520900.1 Wheat cytosol 50.24 63.3
GSMUA_Achr4P24890_001 Banana cytosol, plastid 53.2 62.94
GSMUA_Achr5P20150_001 Banana cytosol 59.89 62.89
KRG93706 Soybean nucleus 17.48 62.89
TraesCS4B01G352300.1 Wheat cytosol 50.14 61.26
Zm00001d050470_P001 Maize mitochondrion 22.83 60.05
Solyc10g017650.1.1 Tomato cytosol 63.8 59.7
EER92041 Sorghum cytosol, nucleus, peroxisome 59.69 59.35
Zm00001d029684_P001 Maize peroxisome 58.74 58.68
Zm00001d015818_P002 Maize cytosol, nucleus, peroxisome 15.47 58.48
Os10t0524400-01 Rice plasma membrane 57.21 57.27
KRH77470 Soybean cytosol 7.35 56.2
TraesCS1A01G187400.1 Wheat peroxisome 58.45 55.28
HORVU1Hr1G048970.1 Barley cytosol, nucleus, peroxisome 58.55 55.27
KRH60977 Soybean cytosol 43.46 53.72
Zm00001d015256_P001 Maize cytosol 21.2 53.62
KRH51648 Soybean cytosol 43.27 53.48
KRH76589 Soybean extracellular 43.94 53.24
KRH59149 Soybean cytosol 43.27 52.86
KRH28860 Soybean mitochondrion 43.55 52.66
KRH43039 Soybean cytosol 42.69 52.16
KRH37270 Soybean cytosol 12.51 49.81
KRH09736 Soybean cytosol, endoplasmic reticulum, nucleus 32.28 47.54
KRH47460 Soybean cytosol 36.49 47.22
Bra008515.1-P Field mustard mitochondrion, plastid 65.14 47.03
KRH23570 Soybean endoplasmic reticulum 35.63 46.22
KRH44445 Soybean cytosol 34.77 46.19
KRH52444 Soybean cytosol, plastid 34.77 44.34
KRH52443 Soybean cytosol 34.58 43.83
KRH76243 Soybean cytosol 3.34 42.68
KRH10002 Soybean cytosol 29.23 40.32
KRH61774 Soybean cytosol 13.28 39.83
KRH44164 Soybean cytosol 28.65 38.66
KRH47139 Soybean cytosol 28.37 38.62
KRH09735 Soybean cytosol 17.0 38.36
KRH23329 Soybean cytosol 6.11 24.15
KRH16190 Soybean cytosol 2.29 20.87
KRH12101 Soybean plastid 18.53 17.28
KRH37058 Soybean plastid 18.34 17.05
KRG92923 Soybean cytosol, nucleus, peroxisome 17.96 16.79
KRH05308 Soybean endoplasmic reticulum 2.96 15.74
Protein Annotations
KEGG:00564+3.1.4.4KEGG:00565+3.1.4.4EntrezGene:100805294Gene3D:2.60.40.150Gene3D:3.30.870.10MapMan:5.7.2.4.2
EMBL:ACUP02004219InterPro:C2_domInterPro:C2_domain_sfEnsemblPlantsGene:GLYMA_07G080400GO:GO:0003674GO:GO:0003824
UniProt:I1KIJ3InterPro:IPR000008InterPro:IPR001736InterPro:IPR035892EnsemblPlants:KRH48290ProteinID:KRH48290
ProteinID:KRH48290.1PFAM:PF00168PFAM:PF00614PFAM:PF12357InterPro:PLipase_D/transphosphatidylaseInterPro:PLipase_D_C
InterPro:PLipase_D_famPFscan:PS50004PFscan:PS50035PANTHER:PTHR18896PANTHER:PTHR18896:SF65MetaCyc:PWY-3561
MetaCyc:PWY-7039SMART:SM00155SMART:SM00239SUPFAM:SSF49562SUPFAM:SSF56024UniParc:UPI0002338DAC
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr7:-:7312327..7319873
Molecular Weight (calculated)
117368.0 Da
IEP (calculated)
7.123
GRAVY (calculated)
-0.482
Length
1047 amino acids
Sequence
(BLAST)
0001: MDNYGSSQHP YGYPNPYSYP PHDPYAQPPY PYPYPYPYPY PHPTNPPHNN NSNYPYPPPP PPPHSSSPYS SPINYSSYPP PPPPPPPPPS TSSHGSFDYP
0101: MPQPPHTYPY PHRVPPEWSV TTGGGVSHSH ASDSYNPPHS AAYPTLDDLM SNDRLSDNNN LPSAPPLTHS PPILYLDRRD EFYGYSSYSS SSLDQGDPSR
0201: LSDNNDDSVN SESLQIVPAQ HKGSLRVLLL HGNLDIWVHG AKNLPNMDMF HKTLEDMIGR FPGTVASNKI EGTVSRKITS DPYVTISVSN AVIGRTFVIS
0301: NSENPVWEQH FYVPVAHHAA EVHFVVKDSD VVGSQLIGVV AIPVEKIYSG QKVQGTYPIL NSNGKPCKPG AVLMVSIQYI PMHTLIMYYQ GVGAGPDYIG
0401: VPGTYFPLRK GGTVTLYQDA HVPDGCLPNV VLDNGVYYAH GKCWLDIFDA INRAKRLIYI TGWSVWHKVR LVRDPGNPSK FTLGDILRSK SSEGVRVLLL
0501: IWDDPTSRSI LGYKVDGVMA THDEETRRFF KHSSVHVLLC PRIAAKRHSW AKQKEVGTIY THHQKTVIVD ADAGNNQRKI VAFVGGLDLC DGRYDTPHHP
0601: LFRTLQTLHK DDYHNPTFTG NTGGCPREPW HDLHSKIDGP AAYDILKNFE ERWLRAAKPK GIQKLRSSYD DALLKLDRIG DIISSSNAPS VGDDNPESWH
0701: VQIFRSIDSS SVKGFPKEPK DASSMNLVCG KNVLIDMSIH TAYVKAIRAA QHYIYIENQY FIGSSYNWSQ HKDLGANNLI PMEIALKIAA KIRANERFAV
0801: YIVIPMWPEG VPTGAATQRI LFWQHKTMQM MYETIYKALV EVGLETAFSP QDYLNFFCLG NREAIDMYEN ITVSGTPPPA NSPQAFSRNN RRFMIYVHSK
0901: GMIVDDEYVI LGSANINQRS MEGTRDTEIA MGAYQPHHTW ARSQYHPRGQ IHGYRMSLWA EHTGTIEDCF LQPESLECVS RIRTMGELNW KQFASNDVTE
1001: MTGHLLKYPV EVDRKGKVRS LPGHEEFPDV GGKIVGSFIA IQENLTI
Best Arabidopsis Sequence Match ( AT4G00240.1 )
(BLAST)
001: MENYGWNYPY YPYRPPRPNP PYPAPPHHHG SMSHSGPLDH HHPPMSYYAS FDYQHQPPPP YPPVSYYASF SSHSDLSYSG RLDSSGHGFT STASPHSPGM
101: HIVPFGKASL KVLLLHGNLD IWVSCANNLP NLDLFHKTLG VVFGGMTNMI EGQLSKKITS DPYVSISVAG AVIGRTYVIS NSENPVWQQH FYVPVAHHAA
201: EVHFVVKDSD AVGSQLIGIV TIPVEQIYSG ARIEGTYSIR DSNGKPCKPG ATLSLSIQYT SMNKLSVYHS GVGAGPYYQG VPGTYFPLRE GGSVTLYQDA
301: HVPEGMLPGI KLGNGMCYEH GKCWHDMFHA ICQARRLIYI TGWSVWHNVR LVRDKEDPSS ECRLGELLRS KSQEGVRVLL LVWDDPTSQN ILGYMTDGVM
401: GTHDEETRRF FKDSSVQVLL CPRNAGKRHS WVKQREVGTI YTHHQKNLIV DADAGGNRRK IVAFVGGLDL CDGRYDTPQH PLFRTLQTDH NGDYHNPTFT
501: GNVSGCPREP WHDLHSKIDG PAAYDVLTNF EERWLKAAKP HRINKLKTSY DDALLRIDRI PDILRVLDAP TVSANDPEAW HVQIFRSIDS NSVKGFPKDP
601: KYATSKNLVC GKNVLIDMSI HTAYVKAIRA AQHFIYIENQ YFIGSSYDWN AHKDIGANNL IPMEIALKIA DKIRAKERFA AYIVIPMWPE GVPTGAATQR
701: ILYWQHKTMQ MMYGTIYNAL VEAGLEDEYS PQDYLNFFCL GNREMVNGNN ESGTGSASNE NTPQGLCRKS RRFMIYVHSK GMVVDDEYVV IGSANINQRS
801: MEGTRDTEIA MGAYQPQHTW ARRQSGPRGQ IYGYRMSLWA EHMALLDDCF VEPESLGCVR KVRTVAEENW EQFRSEEVSE MRGHLMKYPV EVDRKGKVRP
901: LPGSEEFPDV GGNVVGSFLA IQENLTI
Arabidopsis Description
PLDBETA2Phospholipase D beta 2 [Source:UniProtKB/Swiss-Prot;Acc:O23078]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.