Factsheet for Bra008515.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 4
vacuole 1
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY54926	Canola	cytosol, nucleus, peroxisome	68.0	98.31
CDY52961	Canola	cytosol, nucleus, peroxisome	66.83	97.68
AT4G00240.1	Thale cress	cytosol	54.83	85.76
PGSC0003DMT400026602	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	16.76	79.41
PGSC0003DMT400000378	Potato	cytosol	13.86	76.72
Bra033225.1-P	Field mustard	cytosol	54.62	74.02
KRG89825	Soybean	cytoskeleton, cytosol, peroxisome	14.28	71.13
Solyc01g091910.2.1	Tomato	plastid	43.66	70.73
TraesCS1D01G189300.1	Wheat	cytosol	39.31	70.37
TraesCS1B01G195200.1	Wheat	cytosol	39.31	70.37
GSMUA_Achr8P12030_001	Banana	plastid	38.62	69.65
Bra000752.1-P	Field mustard	cytosol, nucleus, peroxisome	24.83	68.44
KRH65182	Soybean	cytosol	35.72	68.25
Bra022740.1-P	Field mustard	cytosol, extracellular	5.86	67.46
TraesCS1B01G382600.1	Wheat	mitochondrion	38.34	67.15
TraesCS1A01G365100.2	Wheat	mitochondrion	38.34	67.15
Bra014871.1-P	Field mustard	cytosol	38.97	66.71
TraesCS1D01G370600.1	Wheat	cytosol	38.07	66.67
Os03t0119100-01	Rice	plasma membrane	38.0	65.99
HORVU1Hr1G079150.1	Barley	cytosol	37.59	65.82
KXG40331	Sorghum	cytosol	37.31	65.5
KRH48290	Soybean	nucleus	47.03	65.14
VIT_15s0048g01160.t01	Wine grape	cytosol	48.76	65.04
KRH01625	Soybean	cytosol	48.9	64.63
Zm00001d027386_P002	Maize	cytosol	37.17	64.63
HORVU4Hr1G085550.2	Barley	cytosol	36.97	64.5
KRH70487	Soybean	cytosol	49.17	64.47
TraesCS4D01G346700.1	Wheat	cytosol	36.83	64.26
TraesCS5A01G520900.1	Wheat	cytosol	36.48	63.66
Bra000753.1-P	Field mustard	cytosol	34.41	62.85
GSMUA_Achr4P24890_001	Banana	cytosol, plastid	38.14	62.49
GSMUA_Achr5P20150_001	Banana	cytosol	42.62	61.99
Zm00001d050470_P001	Maize	mitochondrion	16.97	61.81
TraesCS4B01G352300.1	Wheat	cytosol	36.41	61.61
Solyc10g017650.1.1	Tomato	cytosol	45.31	58.71
Os10t0524400-01	Rice	plasma membrane	42.0	58.22
EER92041	Sorghum	cytosol, nucleus, peroxisome	42.28	58.21
Zm00001d029684_P001	Maize	peroxisome	42.0	58.11
Zm00001d015818_P002	Maize	cytosol, nucleus, peroxisome	10.69	55.96
HORVU1Hr1G048970.1	Barley	cytosol, nucleus, peroxisome	42.76	55.91
TraesCS1A01G187400.1	Wheat	peroxisome	42.62	55.83
Zm00001d015256_P001	Maize	cytosol	15.24	53.38
Bra034939.1-P	Field mustard	cytosol	29.86	51.98
Bra010512.1-P	Field mustard	cytosol	28.76	51.67
Bra017730.1-P	Field mustard	cytosol	29.31	50.66
Bra027209.1-P	Field mustard	cytosol	25.66	45.93
Bra040960.1-P	Field mustard	cytosol	25.66	45.81
Bra030375.1-P	Field mustard	cytosol	25.52	45.57
Bra021132.1-P	Field mustard	cytosol	25.1	44.83
Bra020497.1-P	Field mustard	cytosol	25.1	44.28
Bra037982.1-P	Field mustard	cytosol	20.83	39.68
Bra009836.1-P	Field mustard	cytosol	24.69	38.41
Bra040531.1-P	Field mustard	cytosol, nucleus, peroxisome	13.31	18.43
Bra022178.1-P	Field mustard	cytosol, nucleus, peroxisome	13.1	17.72

Protein Annotations

KEGG:00564+3.1.4.4	KEGG:00565+3.1.4.4	Gene3D:2.30.30.60	Gene3D:2.60.40.150	MapMan:24.3.5	Gene3D:3.30.870.10
MapMan:5.7.2.4.2	EnsemblPlantsGene:Bra008515	EnsemblPlants:Bra008515.1	EnsemblPlants:Bra008515.1-P	InterPro:C2_dom	InterPro:C2_domain_sf
ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0055085	InterPro:IPR000008	InterPro:IPR001736	InterPro:IPR023408	InterPro:IPR035892
InterPro:LSM_dom_sf	UniProt:M4CWB8	InterPro:MscS_channel	InterPro:MscS_channel_TM-2	InterPro:MscS_dom_sf	PFAM:PF00168
PFAM:PF00614	PFAM:PF00924	PFAM:PF12357	InterPro:PLipase_D/transphosphatidylase	InterPro:PLipase_D_C	InterPro:PLipase_D_fam
PFscan:PS50004	PFscan:PS50035	PANTHER:PTHR18896	PANTHER:PTHR18896:SF65	SMART:SM00155	SMART:SM00239
SUPFAM:SSF49562	SUPFAM:SSF50182	SUPFAM:SSF56024	SUPFAM:SSF82861	UniParc:UPI0002546E35	SEG:seg

Description

AT4G00240 (E=0.0) PLDBETA2 | PLDBETA2; phospholipase D

Coordinates

chrA02:-:16105973..16113974

Molecular Weight (calculated)

160764.0 Da

IEP (calculated)

8.427

GRAVY (calculated)

-0.314

Length

1450 amino acids

Sequence
(BLAST)

0001: MGGGGGVRLS LLKSLYRSST RISSSSSSSC RRLAEEAAIV RSSSPVSSFT HARAIGYGYG SWIVSSSSNL NAKPFPLLAR AFSSQPDGTD WVHKAKDVFH
0101: ETANKAKEAS DELTPHVQQL LDANPYLKEV MVPVSLTMTG TLFAWVVMPK VLRRFHGYSM RSSAALLPQG FAIDDVPYDK SFWGALEDPA RYLMTFIAFA
0201: QIASMVAPTT VAAQYFFPAL KGAVILSLVW FLHRWKTNVI TRVLSAKNVA GLDREKILTL DKVSSVGLFA IGLMASAEAC GVAVQSILTV GGVGGVATAF
0301: AARDILGNVL SGLSMQFSRP FSMGDTIKAG SVEGQVVEMG LTTTSLLNAE KFPVLVPNSL FSSQVIVNKS RAQWRAIASK IPLQIDDLDK IPQISDEIKE
0401: TLRSNPKVFL GKEAPHCYLS RVEKSFAELT IGCNLKYMGK EELYATQQEV LLESVKIIKK HGPPPPPPNS DPYPPQAYPP PLHHQYGSMS HSGPLDYAHR
0501: PPPPLHHHYG SMSPSGPPPH YSYDHQHQPY PYPPQQPTLQ PHASFASYPP PPQHPPRPHD NFGSSSPPVY PPLHDLMGAL TLSSHHHPPS SNPGSYHGQP
0601: YHSFSTHSHL SHSGRLDSPL PHSPSLQIVP SGKPSLKVLL LHGNLDILIY RANNLPNMDL FHNTLGAVFG SISNMIEGQL SKKITSDPYV SISVAGAVIG
0701: RTYVMSNSEN PVWHQHFYVP VAHHAAEVHF VVKDSDVVGS QLIGLVTIPV EQIHSGARIE GTYSILSSNG KPCKPGATLT LSIQYTSADK LSVYHSGVGG
0801: GPSYQGVPGT HFPLREGGNV TLYQDAHVPE GMLPRIRLGN GMYYENGKCW DDMFHAICQA RRLIYITGWS VWHNVRLARD KGNPASECTL GELLKSKSRE
0901: GVRVLLLVWD DPTSRDILGY KTDGVMGTHD EETRRFFKHS SVQILLCPRN AGKRHSWVKQ TEVGTIYTHH QKTLIVDADA GGNRRKIVAF VGGLDLCDGR
1001: YDTPQHPLFR TLQTDHKGDY HNPTFTGNLS GCPREPWHDL HSKIDGPAAY DVLTNFEERW LKAAKPHRIN KLKTSYDDAL LRIERIPDIL GVFDAPTVSA
1101: NDPEAWHVQI FRSIDSNSVK GFPKDPKYAT SKNLMCGKNV LIDMSIHTAY VKAIRAAQHF IYIENQYFIG SSYNWNAHKD IGANNLIPME IALKIADKIR
1201: ANERFAVYIV IPMWPEGVPT GAATQRILYW QHKTMQMMYG TIYNALVEAG LDDKFSPQDY LNFFCLGNRE MVDGNNETNQ SNENTPQASC RKSRRFMIYV
1301: HSKGMVVDDE YVVIGSANIN QRSMEGTRDT EIAMGAYQPQ HTWARRQSGP RGQIFGYRMS LWAEHMAMLD DSFEEPESLE CVSKVRRMGE ENWKQFRAEQ
1401: VSEMRGHLLK YPVEVDRRGK VRPLPGSEEF PDVGGNIVGS FLAIQENLTI

Best Arabidopsis Sequence Match ( AT4G00240.1 )
(BLAST)

001: MENYGWNYPY YPYRPPRPNP PYPAPPHHHG SMSHSGPLDH HHPPMSYYAS FDYQHQPPPP YPPVSYYASF SSHSDLSYSG RLDSSGHGFT STASPHSPGM
101: HIVPFGKASL KVLLLHGNLD IWVSCANNLP NLDLFHKTLG VVFGGMTNMI EGQLSKKITS DPYVSISVAG AVIGRTYVIS NSENPVWQQH FYVPVAHHAA
201: EVHFVVKDSD AVGSQLIGIV TIPVEQIYSG ARIEGTYSIR DSNGKPCKPG ATLSLSIQYT SMNKLSVYHS GVGAGPYYQG VPGTYFPLRE GGSVTLYQDA
301: HVPEGMLPGI KLGNGMCYEH GKCWHDMFHA ICQARRLIYI TGWSVWHNVR LVRDKEDPSS ECRLGELLRS KSQEGVRVLL LVWDDPTSQN ILGYMTDGVM
401: GTHDEETRRF FKDSSVQVLL CPRNAGKRHS WVKQREVGTI YTHHQKNLIV DADAGGNRRK IVAFVGGLDL CDGRYDTPQH PLFRTLQTDH NGDYHNPTFT
501: GNVSGCPREP WHDLHSKIDG PAAYDVLTNF EERWLKAAKP HRINKLKTSY DDALLRIDRI PDILRVLDAP TVSANDPEAW HVQIFRSIDS NSVKGFPKDP
601: KYATSKNLVC GKNVLIDMSI HTAYVKAIRA AQHFIYIENQ YFIGSSYDWN AHKDIGANNL IPMEIALKIA DKIRAKERFA AYIVIPMWPE GVPTGAATQR
701: ILYWQHKTMQ MMYGTIYNAL VEAGLEDEYS PQDYLNFFCL GNREMVNGNN ESGTGSASNE NTPQGLCRKS RRFMIYVHSK GMVVDDEYVV IGSANINQRS
801: MEGTRDTEIA MGAYQPQHTW ARRQSGPRGQ IYGYRMSLWA EHMALLDDCF VEPESLGCVR KVRTVAEENW EQFRSEEVSE MRGHLMKYPV EVDRKGKVRP
901: LPGSEEFPDV GGNVVGSFLA IQENLTI

Arabidopsis Description

PLDBETA2Phospholipase D beta 2 [Source:UniProtKB/Swiss-Prot;Acc:O23078]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.