Factsheet for HORVU4Hr1G085550.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytoskeleton, cytosol
MultiLoc:	cytosol
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU4Hr1G035250.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G11850.1	HORVU4Hr1G035250.1	AT4G26630.1	25387881

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G520900.1	Wheat	cytosol	94.95	94.95
TraesCS4D01G346700.1	Wheat	cytosol	93.62	93.62
TraesCS4B01G352300.1	Wheat	cytosol	93.86	91.02
KXG40331	Sorghum	cytosol	78.82	79.3
Os03t0119100-01	Rice	plasma membrane	78.7	78.32
Zm00001d027386_P002	Maize	cytosol	78.34	78.06
Zm00001d050470_P001	Maize	mitochondrion	35.02	73.12
PGSC0003DMT400000378	Potato	cytosol	22.86	72.52
PGSC0003DMT400026602	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	25.99	70.59
HORVU1Hr1G079150.1	Barley	cytosol	69.8	70.05
CDY41006	Canola	mitochondrion	13.0	69.23
Bra022740.1-P	Field mustard	cytosol, extracellular	10.23	67.46
CDY28756	Canola	cytosol, extracellular	10.23	67.46
GSMUA_Achr8P12030_001	Banana	plastid	64.62	66.79
CDY13283	Canola	mitochondrion	28.28	66.57
KRG89825	Soybean	cytoskeleton, cytosol, peroxisome	22.98	65.64
Bra000752.1-P	Field mustard	cytosol, nucleus, peroxisome	40.31	63.69
CDX86742	Canola	cytosol	63.66	62.46
Zm00001d015818_P002	Maize	cytosol, nucleus, peroxisome	20.82	62.45
Bra014871.1-P	Field mustard	cytosol	63.54	62.34
VIT_02s0025g04620.t01	Wine grape	cytosol	63.54	62.12
Solyc08g080130.2.1	Tomato	nucleus	63.18	62.06
PGSC0003DMT400058531	Potato	plastid	63.3	61.96
AT4G11850.1	Thale cress	cytosol	63.18	61.19
KRH77467	Soybean	nucleus	62.33	60.73
Solyc01g091910.2.1	Tomato	plastid	65.34	60.67
CDY64184	Canola	mitochondrion	59.45	60.61
CDX90807	Canola	cytosol	58.72	60.47
AT4G11830.2	Thale cress	cytosol	61.73	59.93
AT4G11840.1	Thale cress	cytosol	62.21	59.7
Bra000753.1-P	Field mustard	cytosol	55.96	58.56
CDX90808	Canola	cytosol	55.72	58.31
CDY13284	Canola	cytosol	31.65	57.3
AT4G00240.1	Thale cress	cytosol	63.54	56.96
KRG93706	Soybean	nucleus	19.61	56.01
CDX90066	Canola	cytosol	65.46	55.85
HORVU1Hr1G048970.1	Barley	cytosol, nucleus, peroxisome	74.13	55.55
GSMUA_Achr5P20150_001	Banana	cytosol	66.43	55.37
KRH77470	Soybean	cytosol	9.03	54.74
CDY52961	Canola	cytosol, nucleus, peroxisome	64.5	54.03
KRH65182	Soybean	cytosol	48.74	53.36
CDY54926	Canola	cytosol, nucleus, peroxisome	64.38	53.34
KRH77469	Soybean	nucleus	4.33	51.43
CDY15144	Canola	peroxisome	65.82	51.41
HORVU5Hr1G060030.2	Barley	cytosol	51.62	51.13
Bra033225.1-P	Field mustard	cytosol	65.82	51.12
CDY46254	Canola	cytosol	5.9	50.52
KRH48290	Soybean	nucleus	63.42	50.33
VIT_15s0048g01160.t01	Wine grape	cytosol	64.14	49.03
AT2G42010.2	Thale cress	peroxisome	65.34	49.01
KRH01625	Soybean	cytosol	63.9	48.4
KRH70487	Soybean	cytosol	63.66	47.83
HORVU5Hr1G084740.4	Barley	plastid	41.03	47.69
Solyc10g017650.1.1	Tomato	cytosol	63.78	47.36
HORVU7Hr1G089960.3	Barley	cytosol	45.61	46.22
HORVU3Hr1G024530.2	Barley	plastid	42.96	43.97
HORVU0Hr1G009480.5	Barley	extracellular, peroxisome	33.21	42.2
HORVU6Hr1G012780.6	Barley	cytosol, nucleus, plastid	43.92	42.0
HORVU1Hr1G025370.1	Barley	cytosol	42.84	41.64
HORVU1Hr1G082890.5	Barley	cytosol	41.03	41.23
HORVU1Hr1G082940.1	Barley	cytosol	40.55	40.5
HORVU1Hr1G082950.2	Barley	nucleus	40.31	39.69
HORVU5Hr1G064520.1	Barley	cytosol	38.75	38.75
Bra008515.1-P	Field mustard	mitochondrion, plastid	64.5	36.97
HORVU7Hr1G082870.1	Barley	cytosol	22.98	34.79
HORVU1Hr1G059050.25	Barley	plastid	22.14	15.82

Protein Annotations

KEGG:00564+3.1.4.4	KEGG:00565+3.1.4.4	Gene3D:2.60.40.150	Gene3D:3.30.870.10	MapMan:5.7.2.4.2	UniProt:A0A287PYK9
InterPro:C2_dom	InterPro:C2_domain_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0004630	GO:GO:0005488
GO:GO:0005509	GO:GO:0005575	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009987	GO:GO:0016020	GO:GO:0016042	GO:GO:0016787	GO:GO:0046470	GO:GO:0070290
EnsemblPlantsGene:HORVU4Hr1G085550	EnsemblPlants:HORVU4Hr1G085550.2	InterPro:IPR000008	InterPro:IPR001736	InterPro:IPR035892	PFAM:PF00168
PFAM:PF00614	PFAM:PF12357	PIRSF:PIRSF036470	InterPro:PLipase_D/transphosphatidylase	InterPro:PLipase_D_C	InterPro:PLipase_D_fam
InterPro:PLipase_D_pln	PFscan:PS50004	PFscan:PS50035	PANTHER:PTHR18896	PANTHER:PTHR18896:SF61	SMART:SM00155
SMART:SM00239	SUPFAM:SSF49562	SUPFAM:SSF56024	UniParc:UPI000B472C37	:	:

Description

Phospholipase D [Source:UniProtKB/TrEMBL;Acc:A0A287PYK9]

Coordinates

chrchr4H:-:632146415..632150417

Molecular Weight (calculated)

92858.0 Da

IEP (calculated)

6.540

GRAVY (calculated)

-0.362

Length

831 amino acids

Sequence
(BLAST)

001: MSDDEDSRTT AALLASTSSN HRPVLLHGSL DIWIDEACNL PNKDILSNTM GGLLKSCTSD PGAESTSDPY VTVLVASATV ARTYVIQDDE NPRWRQHFLV
101: PVAHEAAAVS FVIKDSDVIG AELIGAVAVP AESLLAGDRV GGVYPVLEPS GKPCARGATL RMSVQYVPVA RLTMYSHGVT PGPDFPGVPN TYFPLRRGGR
201: VTLYQDAHVP GDGQCLPEIR LGNGELYRHG QCWHDVYDAM SQATKLIYIT GWSVFHTIHL VRDGDNARPL GDLLKKKSQE GVRVLLLVWD DPTSRSVLGI
301: QMEGYMGTRD EETRRFFKHS SVQILLCPRS AGKRHSWVKQ QETGTIFTHH QKTVIVDADA GDGKRKIVAF VGGLDLCGGR YDTPGHHLFH TLNTVHKEDY
401: YNPNFAVTDE RGPREPWHDL HSKIDGPAAF DVLKNFEERW LKSSKRSGAK KLSKSCNDTL LWIERIPEIA AIDDDVYSND NDTERWDIQV FRSIDSNSVK
501: AFPKDPREAT IKNLVCGKNV LIDTSIHTAY VTAIRAAQHF IYIENQYFLG SSFQWDSHRD LGANNLIPIE IALKIANKIY ANERFSAYIV IPMWPEGSPT
601: GSPTQRILYW QKKTMQMMYE IIYKALKDTG LNGSYDPQDY LNFFCLGNRE AVENPNAFAD AFSPTNPQDQ SRKNRRFMVY VHSKGMIVDD EYVIIGSANI
701: NQRSMEGTRD TEIAMGAYQP HYTWANMLSA PRGQIYGYRM SLWAEHIGGV EASFERPDTL ECVQRVRGIG ETNWKRFVAE EVTEMRGHLI RYPVAVDWNG
801: KVGPLPGCAA FPDVGGNICG SFSGIQENLT I

Best Arabidopsis Sequence Match ( AT2G42010.1 )
(BLAST)

0001: MDNHGPRYPY PYGQYPYPYP YPAPYRPPSS EPYPPPPTNQ YSAPYYPYPP PPYATPPPYA SPPPPHQHTS GSHSGPLDYS HNPQPSSLAA APPEYHRHSF
0101: DYQPSPYPYQ PQGNFGAYGP PPPHYSYQEP AQYPPPETKP QEPLPPPQQT QGFQEYRRQD CLSTGGTGHD NVSNSGSSYP PVDELLGGLH ISTNQPGPSV
0201: PQLSSLPSNS WQSRPGDLYG YPNSSFPSNS HLPQLGRVDS SSSYYASTES PHSADMQMTL FGKGSLKVLL LHGNLDIWIY HAKNLPNMDM FHKTLGDMFG
0301: RLPGKIEGQL TSKITSDPYV SVSVAGAVIG RTYVMSNSEN PVWMQHFYVP VAHHAAEVHF VVKDSDVVGS QLIGLVTIPV EQIYSGAKIE GTYPILNSNG
0401: KPCKPGANLS LSIQYTPMDK LSVYHHGVGA GPDYQGVPGT YFPLRKGGTV RLYQDAHVPE GMLPGIRLDN GMSYEHGKCW HDMFDAIRQA RRLIYITGWS
0501: VWHKVKLIRD KLGPASECTL GELLRSKSQE GVRVLLLIWD DPTSRSILGY KTDGVMATHD EETRRFFKHS SVQVLLCPRN AGKRHSWVKQ REVGTIYTHH
0601: QKNVIVDADA GGNRRKIIAF VGGLDLCDGR YDTPQHPLFR TLQTIHKDDF HNPTFTGNLS GCPREPWHDL HSKIDGPAAY DVLTNFEERW LKAAKPSGIK
0701: KFKTSYDDAL LRIDRIPDIL GVSDTPTVSE NDPEAWHVQI FRSIDSNSVK GFPKDPKDAT CKNLVCGKNV LIDMSIHTAY VKAIRAAQHF IYIENQYFIG
0801: SSYNWNAHKD IGANNLIPME IALKIAEKIR ANERFAAYIV IPMWPEGVPT GAATQRILYW QHKTIQMMYE TIYKALVETG LEGAFSPQDY LNFFCLGNRE
0901: MVDGIDNSGT GSPSNANTPQ ALSRKSRRFM VYVHSKGMVV DDEYVVIGSA NINQRSMEGT RDTEIAMGAY QPQHTWARKH SGPRGQIYGY RMSLWAEHMA
1001: TLDDCFTQPE SIECVRKVRT MGERNWKQFA AEEVSDMRGH LLKYPVEVDR KGKVRPLPGS ETFPDVGGNI VGSFIAIQEN LTI

Arabidopsis Description

PLDBETA1phospholipase D beta 1 [Source:TAIR;Acc:AT2G42010]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.