Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 1
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT4G11840.1 | Thale cress | cytosol | 92.64 | 91.57 |
| CDY13283 | Canola | mitochondrion | 37.62 | 91.22 |
| AT4G11850.1 | Thale cress | cytosol | 90.65 | 90.44 |
| Bra014871.1-P | Field mustard | cytosol | 87.03 | 87.96 |
| CDX86742 | Canola | cytosol | 87.03 | 87.96 |
| CDY41006 | Canola | mitochondrion | 15.89 | 87.18 |
| CDY13284 | Canola | cytosol | 44.51 | 83.01 |
| CDY28756 | Canola | cytosol, extracellular | 12.03 | 81.75 |
| Bra022740.1-P | Field mustard | cytosol, extracellular | 12.03 | 81.75 |
| CDY46254 | Canola | cytosol | 8.64 | 76.29 |
| VIT_02s0025g04620.t01 | Wine grape | cytosol | 66.71 | 67.18 |
| Solyc08g080130.2.1 | Tomato | nucleus | 66.36 | 67.14 |
| PGSC0003DMT400058531 | Potato | plastid | 66.59 | 67.14 |
| TraesCS1D01G189300.1 | Wheat | cytosol | 62.97 | 66.54 |
| TraesCS1B01G195200.1 | Wheat | cytosol | 62.85 | 66.42 |
| KRH77467 | Soybean | nucleus | 64.72 | 64.95 |
| GSMUA_Achr8P12030_001 | Banana | plastid | 60.51 | 64.43 |
| TraesCS1A01G365100.2 | Wheat | mitochondrion | 61.33 | 63.41 |
| TraesCS1D01G370600.1 | Wheat | cytosol | 60.86 | 62.92 |
| KXG40331 | Sorghum | cytosol | 60.51 | 62.71 |
| TraesCS1B01G382600.1 | Wheat | mitochondrion | 60.51 | 62.56 |
| Zm00001d027386_P002 | Maize | cytosol | 60.75 | 62.35 |
| HORVU1Hr1G079150.1 | Barley | cytosol | 59.93 | 61.96 |
| HORVU4Hr1G085550.2 | Barley | cytosol | 59.93 | 61.73 |
| TraesCS4D01G346700.1 | Wheat | cytosol | 59.81 | 61.61 |
| KRG93706 | Soybean | nucleus | 20.91 | 61.51 |
| Os03t0119100-01 | Rice | plasma membrane | 59.93 | 61.44 |
| TraesCS5A01G520900.1 | Wheat | cytosol | 59.35 | 61.13 |
| KRH77469 | Soybean | nucleus | 4.91 | 60.0 |
| Zm00001d050470_P001 | Maize | mitochondrion | 27.69 | 59.55 |
| AT4G00240.1 | Thale cress | cytosol | 64.37 | 59.44 |
| TraesCS4B01G352300.1 | Wheat | cytosol | 59.23 | 59.16 |
| GSMUA_Achr4P24890_001 | Banana | cytosol, plastid | 60.4 | 58.42 |
| KRH77470 | Soybean | cytosol | 9.23 | 57.66 |
| Zm00001d015818_P002 | Maize | cytosol, nucleus, peroxisome | 17.76 | 54.87 |
| GSMUA_Achr5P20150_001 | Banana | cytosol | 63.55 | 54.56 |
| Zm00001d015256_P001 | Maize | cytosol | 25.47 | 52.66 |
| AT2G42010.2 | Thale cress | peroxisome | 66.94 | 51.71 |
| Zm00001d029684_P001 | Maize | peroxisome | 62.5 | 51.05 |
| EER92041 | Sorghum | cytosol, nucleus, peroxisome | 62.73 | 51.0 |
| Os10t0524400-01 | Rice | plasma membrane | 61.8 | 50.57 |
| AT4G35790.1 | Thale cress | cytosol | 50.58 | 49.88 |
| TraesCS1A01G187400.1 | Wheat | peroxisome | 63.55 | 49.14 |
| HORVU1Hr1G048970.1 | Barley | cytosol, nucleus, peroxisome | 63.08 | 48.69 |
| AT3G15730.1 | Thale cress | cytosol | 42.76 | 45.19 |
| AT1G52570.1 | Thale cress | cytosol | 42.52 | 44.94 |
| AT5G25370.2 | Thale cress | cytosol | 42.06 | 43.9 |
| AT1G55180.1 | Thale cress | cytosol | 34.81 | 39.11 |
| AT3G05630.1 | Thale cress | cytosol | 21.96 | 17.97 |
| AT3G16785.4 | Thale cress | plastid | 21.85 | 16.42 |
Protein Annotations
| KEGG:00564+3.1.4.4 | KEGG:00565+3.1.4.4 | Gene3D:2.60.40.150 | Gene3D:3.30.870.10 | MapMan:5.7.2.4.2 | EntrezGene:826789 |
| ProteinID:AEE83054.1 | ProteinID:AEE83055.1 | EMBL:AF138281 | ArrayExpress:AT4G11830 | EnsemblPlantsGene:AT4G11830 | RefSeq:AT4G11830 |
| TAIR:AT4G11830 | RefSeq:AT4G11830-TAIR-G | EnsemblPlants:AT4G11830.2 | TAIR:AT4G11830.2 | InterPro:C2_dom | InterPro:C2_domain_sf |
| ProteinID:CAB44321.1 | ProteinID:CAB78226.1 | EMBL:DQ812124 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004630 |
| GO:GO:0005488 | GO:GO:0005509 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005829 | GO:GO:0005840 | GO:GO:0006629 | GO:GO:0006643 | GO:GO:0006950 | GO:GO:0006979 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009987 |
| GO:GO:0016020 | GO:GO:0016042 | GO:GO:0016787 | GO:GO:0022626 | GO:GO:0046470 | GO:GO:0070290 |
| InterPro:IPR000008 | InterPro:IPR001736 | InterPro:IPR035892 | RefSeq:NP_192920.3 | RefSeq:NP_849539.1 | PFAM:PF00168 |
| PFAM:PF00614 | PFAM:PF12357 | PIRSF:PIRSF036470 | Symbol:PLDGAMMA2 | InterPro:PLipase_D/transphosphatidylase | InterPro:PLipase_D_C |
| InterPro:PLipase_D_fam | InterPro:PLipase_D_pln | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PFscan:PS50004 | PFscan:PS50035 | PANTHER:PTHR18896 |
| PANTHER:PTHR18896:SF65 | UniProt:Q9T051 | SMART:SM00155 | SMART:SM00239 | SUPFAM:SSF49562 | SUPFAM:SSF56024 |
| UniParc:UPI0000048937 | : | : | : | : | : |
Description
PLDGAMMA2Phospholipase D gamma 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9T051]
Coordinates
chr4:-:7115681..7121919
Molecular Weight (calculated)
96029.1 Da
IEP (calculated)
8.182
GRAVY (calculated)
-0.354
Length
856 amino acids
Sequence
(BLAST)
(BLAST)
001: MSMGGGSNHE FGQWLDQQLV PLATSSGSLM VELLHGNLDI WVKEAKHLPN MICYRNKLVG GISFSELGRR IRKVDGEKSS KFTSDPYVTV SISGAVIGRT
101: FVISNSENPV WMQHFDVPVA HSAAEVHFVV KDNDPIGSKI IGVVGIPTKQ LCSGNRIEGL FPILNSSGKP CRKGAMLSLS IQYTPMERMR LYQKGVGSGV
201: ECVGVPGTYF PLRKGGRVTL YQDAHVDDGT LPSVHLDGGI QYRHGKCWED MADAIRRARR LIYITGWSVF HPVRLVRRNN DPTEGTLGEL LKVKSQEGVR
301: VLVLVWDDPT SMSFPGFSTK GLMNTSDEET RRFFKHSSVQ VLLCPRYGGK GHSFIKKSEV ETIYTHHQKT MIVDAEAAQN RRKIVAFVGG LDLCNGRFDT
401: PKHSLFGTLK TLHKDDFHNP NFVTTEDVGP REPWHDLHSK IDGPAAYDVL ANFEERWMAS KPRGIGKGRT SFDDSLLRIN RIPDIMGLSE ASSANDNDPE
501: SWHVQVFRSI DSTSVKGFPK DPEEATGRNL LCGKNILIDM SIHAAYVKAI RSAQHFIYIE NQYFLGSSFN WDSNKDLGAN NLIPMEIALK IANKIRAREN
601: FAAYIVIPMW PEGAPTSKPI QRILYWQHKT MQMMYQTIYK ALLEVGLDGQ LEPQDFLNFF CLGNREVGTR EVPDGTVNVY NCPRKPPQPN AAQVQALKSR
701: RFMIYVHSKG MVVDDEFVLI GSANINQRSL EGTRDTEIAM GGYQPHHSWA KKGSRPRGQI FGYRMSLWAE HLGFLEQEFE EPENMECVRR VRQLSELNWG
801: QYAAEEVTEM SGHLLKYPVQ VDKTGKVSSL PGCETFPDLG GKIIGSFLTL QENLTI
101: FVISNSENPV WMQHFDVPVA HSAAEVHFVV KDNDPIGSKI IGVVGIPTKQ LCSGNRIEGL FPILNSSGKP CRKGAMLSLS IQYTPMERMR LYQKGVGSGV
201: ECVGVPGTYF PLRKGGRVTL YQDAHVDDGT LPSVHLDGGI QYRHGKCWED MADAIRRARR LIYITGWSVF HPVRLVRRNN DPTEGTLGEL LKVKSQEGVR
301: VLVLVWDDPT SMSFPGFSTK GLMNTSDEET RRFFKHSSVQ VLLCPRYGGK GHSFIKKSEV ETIYTHHQKT MIVDAEAAQN RRKIVAFVGG LDLCNGRFDT
401: PKHSLFGTLK TLHKDDFHNP NFVTTEDVGP REPWHDLHSK IDGPAAYDVL ANFEERWMAS KPRGIGKGRT SFDDSLLRIN RIPDIMGLSE ASSANDNDPE
501: SWHVQVFRSI DSTSVKGFPK DPEEATGRNL LCGKNILIDM SIHAAYVKAI RSAQHFIYIE NQYFLGSSFN WDSNKDLGAN NLIPMEIALK IANKIRAREN
601: FAAYIVIPMW PEGAPTSKPI QRILYWQHKT MQMMYQTIYK ALLEVGLDGQ LEPQDFLNFF CLGNREVGTR EVPDGTVNVY NCPRKPPQPN AAQVQALKSR
701: RFMIYVHSKG MVVDDEFVLI GSANINQRSL EGTRDTEIAM GGYQPHHSWA KKGSRPRGQI FGYRMSLWAE HLGFLEQEFE EPENMECVRR VRQLSELNWG
801: QYAAEEVTEM SGHLLKYPVQ VDKTGKVSSL PGCETFPDLG GKIIGSFLTL QENLTI
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.