Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra037982.1-P | Field mustard | cytosol | 87.4 | 87.52 |
| CDY24051 | Canola | cytosol | 86.75 | 87.2 |
| CDY33065 | Canola | cytosol | 86.48 | 86.94 |
| PGSC0003DMT400006661 | Potato | cytosol | 48.56 | 64.35 |
| VIT_09s0002g02390.t01 | Wine grape | cytosol | 63.25 | 64.1 |
| KRH10002 | Soybean | cytosol | 62.86 | 63.11 |
| KRH44164 | Soybean | cytosol | 63.78 | 62.63 |
| KRH47139 | Soybean | cytosol | 62.6 | 62.03 |
| KRH23329 | Soybean | cytosol | 19.68 | 56.6 |
| Os09t0421300-01 | Rice | cytosol | 44.75 | 41.74 |
| HORVU5Hr1G064520.1 | Barley | cytosol | 45.28 | 41.52 |
| TraesCS5A01G223500.1 | Wheat | cytosol | 44.62 | 41.16 |
| TraesCS5B01G222500.1 | Wheat | cytosol | 44.49 | 41.04 |
| TraesCS5D01G231100.1 | Wheat | cytosol | 44.62 | 40.96 |
| Zm00001d005770_P001 | Maize | cytosol | 40.29 | 40.55 |
| EER98913 | Sorghum | cytosol | 43.96 | 40.51 |
| AT5G25370.2 | Thale cress | cytosol | 42.39 | 39.39 |
| AT1G52570.1 | Thale cress | cytosol | 41.34 | 38.89 |
| AT3G15730.1 | Thale cress | cytosol | 41.08 | 38.64 |
| HORVU7Hr1G082870.1 | Barley | cytosol | 25.72 | 35.7 |
| AT4G11850.1 | Thale cress | cytosol | 39.37 | 34.97 |
| AT4G11830.2 | Thale cress | cytosol | 39.11 | 34.81 |
| AT4G11840.1 | Thale cress | cytosol | 39.11 | 34.41 |
| AT4G35790.1 | Thale cress | cytosol | 37.66 | 33.06 |
| AT4G00240.1 | Thale cress | cytosol | 38.85 | 31.93 |
| AT2G42010.2 | Thale cress | peroxisome | 39.11 | 26.9 |
| AT3G05630.1 | Thale cress | cytosol | 23.23 | 16.92 |
| AT3G16785.4 | Thale cress | plastid | 23.88 | 15.98 |
Protein Annotations
| KEGG:00564+3.1.4.4 | KEGG:00565+3.1.4.4 | Gene3D:2.60.40.150 | Gene3D:3.30.870.10 | MapMan:5.7.2.4.4 | EntrezGene:841961 |
| ProteinID:AAG51567.1 | ProteinID:AEE33199.1 | ArrayExpress:AT1G55180 | EnsemblPlantsGene:AT1G55180 | RefSeq:AT1G55180 | TAIR:AT1G55180 |
| RefSeq:AT1G55180-TAIR-G | EnsemblPlants:AT1G55180.1 | TAIR:AT1G55180.1 | Unigene:At.37104 | InterPro:C2_dom | InterPro:C2_domain_sf |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004630 | GO:GO:0005488 | GO:GO:0005509 | GO:GO:0005575 |
| GO:GO:0005623 | GO:GO:0005886 | GO:GO:0006629 | GO:GO:0006950 | GO:GO:0006970 | GO:GO:0006995 |
| GO:GO:0007154 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009395 |
| GO:GO:0009605 | GO:GO:0009628 | GO:GO:0009791 | GO:GO:0009825 | GO:GO:0009987 | GO:GO:0009991 |
| GO:GO:0016020 | GO:GO:0016036 | GO:GO:0016042 | GO:GO:0016049 | GO:GO:0016787 | GO:GO:0040007 |
| GO:GO:0045848 | GO:GO:0046470 | GO:GO:0048364 | GO:GO:0051301 | GO:GO:0051365 | GO:GO:0070290 |
| InterPro:IPR000008 | InterPro:IPR001736 | InterPro:IPR035892 | RefSeq:NP_175914.1 | PFAM:PF00168 | PFAM:PF12357 |
| PFAM:PF13091 | PIRSF:PIRSF036470 | InterPro:PLD-like_dom | Symbol:PLDEPSILON | InterPro:PLipase_D/transphosphatidylase | InterPro:PLipase_D_C |
| InterPro:PLipase_D_fam | InterPro:PLipase_D_pln | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0007611 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009046 | PO:PO:0020100 | PO:PO:0020137 | PFscan:PS50035 | PANTHER:PTHR18896 |
| PANTHER:PTHR18896:SF79 | UniProt:Q9C888 | SMART:SM00155 | SUPFAM:SSF49562 | SUPFAM:SSF56024 | UniParc:UPI00001314A0 |
| SEG:seg | : | : | : | : | : |
Description
PLDALPHA4Phospholipase D alpha 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9C888]
Coordinates
chr1:-:20585008..20587723
Molecular Weight (calculated)
86774.7 Da
IEP (calculated)
7.625
GRAVY (calculated)
-0.367
Length
762 amino acids
Sequence
(BLAST)
(BLAST)
001: MELEEQKKYF HGTLEITIFD ATPFSPPFPF NCICTKPKAA YVTIKINKKK VAKTSSEYDR IWNQTFQILC AHPVTDTTIT ITLKTRCSVL GRFRISAEQI
101: LTSNSAVING FFPLIADNGS TKRNLKLKCL MWFRPAYLEP GWCRALEEAS FQGIRNASFP QRSNCRVVLY QDAHHKATFD PRVDDVPFNA RNLWEDVYKA
201: IESARHLVYI AGWALNPNLV LVRDNETEIP HAVGVTVGEL LKRKSEEGVA VRVMLWNDET SLPMIKNKGV MRTNVERALA YFRNTNVVCR LCPRLHKKLP
301: TAFAHHQKTI TLDTRVTNSS TKEREIMSFL GGFDLCDGRY DTEEHSLFRT LGTEADFYQT SVAGAKLSRG GPREPWHDCH VSVVGGAAWD VLKNFEQRWT
401: KQCNPSVLVN TSGIRNLVNL TGPTEENNRK WNVQVLRSID HISATEMPRG LPVEKSVHDG YVAAIRKAER FIYIENQYFM GSCDHWESKN DKICSGCTNL
501: IPVEIALKIA AKIRARERFA VYIVIPMWPE GPPESETVEE ILHWTRETMS MMYQIIGEAI WEVGDKSHPR DYLNFFCLAN REEKRDGEFE AVSSPHQKTH
601: YWNAQRNRRF MVYVHSKLMI VDDTYILIGS ANINQRSMDG CRDTEIAIGC YQTNTNNTNE IQAYRLSLWY EHTGGKITAD DLSSSEPESL ECVRGLRTIG
701: EQMWEIYSGD KVVDMLGIHL VAYPISVTGD GAVEEVGDGC FPDTKTLVKG KRSKMFPPVL TT
101: LTSNSAVING FFPLIADNGS TKRNLKLKCL MWFRPAYLEP GWCRALEEAS FQGIRNASFP QRSNCRVVLY QDAHHKATFD PRVDDVPFNA RNLWEDVYKA
201: IESARHLVYI AGWALNPNLV LVRDNETEIP HAVGVTVGEL LKRKSEEGVA VRVMLWNDET SLPMIKNKGV MRTNVERALA YFRNTNVVCR LCPRLHKKLP
301: TAFAHHQKTI TLDTRVTNSS TKEREIMSFL GGFDLCDGRY DTEEHSLFRT LGTEADFYQT SVAGAKLSRG GPREPWHDCH VSVVGGAAWD VLKNFEQRWT
401: KQCNPSVLVN TSGIRNLVNL TGPTEENNRK WNVQVLRSID HISATEMPRG LPVEKSVHDG YVAAIRKAER FIYIENQYFM GSCDHWESKN DKICSGCTNL
501: IPVEIALKIA AKIRARERFA VYIVIPMWPE GPPESETVEE ILHWTRETMS MMYQIIGEAI WEVGDKSHPR DYLNFFCLAN REEKRDGEFE AVSSPHQKTH
601: YWNAQRNRRF MVYVHSKLMI VDDTYILIGS ANINQRSMDG CRDTEIAIGC YQTNTNNTNE IQAYRLSLWY EHTGGKITAD DLSSSEPESL ECVRGLRTIG
701: EQMWEIYSGD KVVDMLGIHL VAYPISVTGD GAVEEVGDGC FPDTKTLVKG KRSKMFPPVL TT
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.