Factsheet for PGSC0003DMT400006661

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
vacuole 1
peroxisome 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_09s0002g02390.t01	Wine grape	cytosol	73.74	56.38
KRH10002	Soybean	cytosol	70.43	53.36
KRH44164	Soybean	cytosol	69.22	51.29
KRH47139	Soybean	cytosol	68.0	50.85
PGSC0003DMT400000378	Potato	cytosol	23.13	50.76
PGSC0003DMT400026602	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	26.61	50.0
CDY33065	Canola	cytosol	64.35	48.81
CDY24051	Canola	cytosol	64.17	48.68
Bra037982.1-P	Field mustard	cytosol	64.35	48.62
AT1G55180.1	Thale cress	cytosol	64.35	48.56
PGSC0003DMT400009253	Potato	cytosol	20.52	45.21
PGSC0003DMT400024828	Potato	cytosol	9.04	40.94
PGSC0003DMT400001650	Potato	cytosol, plastid	51.13	36.25
PGSC0003DMT400024831	Potato	extracellular	50.78	36.18
Os09t0421300-01	Rice	cytosol	51.13	35.99
PGSC0003DMT400073469	Potato	cytosol	50.61	35.97
TraesCS5B01G222500.1	Wheat	cytosol	51.13	35.59
PGSC0003DMT400020297	Potato	cytosol	50.61	35.53
TraesCS5A01G223500.1	Wheat	cytosol	50.78	35.35
TraesCS5D01G231100.1	Wheat	cytosol	50.96	35.3
HORVU5Hr1G064520.1	Barley	cytosol	50.61	35.02
EER98913	Sorghum	cytosol	50.26	34.95
Zm00001d005770_P001	Maize	cytosol	45.91	34.87
PGSC0003DMT400025590	Potato	cytosol	46.96	33.29
PGSC0003DMT400058531	Potato	plastid	47.83	32.39
PGSC0003DMT400011523	Potato	cytosol	46.43	31.19
HORVU7Hr1G082870.1	Barley	cytosol	25.39	26.59
PGSC0003DMT400009250	Potato	cytosol	19.48	20.25
KRH23329	Soybean	cytosol	8.7	18.87

Protein Annotations

EnsemblPlants:PGSC0003DMT400006661	EnsemblPlantsGene:PGSC0003DMG400002592	GO:GO:0003674	GO:GO:0003824	InterPro:IPR001736	InterPro:PLipase_D/transphosphatidylase
InterPro:PLipase_D_C	InterPro:PLipase_D_fam	KEGG:00564+3.1.4.4	KEGG:00565+3.1.4.4	PANTHER:PTHR18896	PANTHER:PTHR18896:SF79
PFAM:PF00614	PFAM:PF12357	PFscan:PS50035	PGSC:PGSC0003DMG400002592	SMART:SM00155	SUPFAM:SSF56024
UniParc:UPI000295594A	UniProt:M0ZRT2	MapMan:5.7.2.4.4	:	:	:

Description

Phospholipase d [Source:PGSC_GENE;Acc:PGSC0003DMG400002592]

Coordinates

chr3:+:60760032..60762552

Molecular Weight (calculated)

66567.4 Da

IEP (calculated)

6.842

GRAVY (calculated)

-0.540

Length

575 amino acids

Sequence
(BLAST)

001: MRPKNLWEDI YRAIEGAKHL VYIAGWSFNP KMVLVRDPSA EITHAKGVKL GELLKRKAEE GVAVMIMLWD DETSLPIIKN KGVMRTHDED SLAYFRDTKV
101: VCKLVPRLHH KLPSFFAHHQ KMIAVDSRSH LSSTNREITS FLGGLDLCDG RYDTEEHSLF RTLNTESHCY DFYQTSLSGA SLHKGGPREP WHDAHARVTG
201: QAAMDILNNF EQRWNKQIGP SLLIPLRSIP ELSNQPNMAS TDRDWNVQVF RSIDHVSACP LPRNMTVERS IHEAYVEAIR RADRFIYIEN QYFIGGCHLW
301: EQDQHCGCRN LIPIEIALKI ANKIRAKERF SAYIVIPMWP EGLPESDSVQ DILYWTRETM KMMYKFIGEA IKESGEQGHP RDYLNFFCLA NREEKIKGEF
401: APPYSPHPES QYWRAQKNRR FMVYVHSKIM IVDDTYLLIG SANINQRSMD GKRDTEIAIG CYQLKTEEED IDQRDIHAYR MSLWYEHTGQ AEQEFQHPQS
501: LACVNRIRSI GDKMWKIYDQ DEVEDMKGVH LVTYPVNVTA EGHVEDLMER NGHFPDTEAP IKGKRSKVLA PTITT

Best Arabidopsis Sequence Match ( AT1G55180.2 )
(BLAST)

001: MSFCYLCSQC ICTKPKAAYV TIKINKKKVA KTSSEYDRIW NQTFQILCAH PVTDTTITIT LKTRCSVLGR FRISAEQILT SNSAVINGFF PLIADNGSTK
101: RNLKLKCLMW FRPAYLEPGW CRALEEASFQ GIRNASFPQR SNCRVVLYQD AHHKATFDPR VDDVPFNARN LWEDVYKAIE SARHLVYIAG WALNPNLVLV
201: RDNETEIPHA VGVTVGELLK RKSEEGVAVR VMLWNDETSL PMIKNKGVMR TNVERALAYF RNTNVVCRLC PRLHKKLPTA FAHHQKTITL DTRVTNSSTK
301: EREIMSFLGG FDLCDGRYDT EEHSLFRTLG TEADFYQTSV AGAKLSRGGP REPWHDCHVS VVGGAAWDVL KNFEQRWTKQ CNPSVLVNTS GIRNLVNLTG
401: PTEENNRKWN VQVLRSIDHI SATEMPRGLP VEKSVHDGYV AAIRKAERFI YIENQYFMGS CDHWESKNDK ICSGCTNLIP VEIALKIAAK IRARERFAVY
501: IVIPMWPEGP PESETVEEIL HWTRETMSMM YQIIGEAIWE VGDKSHPRDY LNFFCLANRE EKRDGEFEAV SSPHQKTHYW NAQRNRRFMV YVHSKLMIVD
601: DTYILIGSAN INQRSMDGCR DTEIAIGCYQ TNTNNTNEIQ AYRLSLWYEH TGGKITADDL SSSEPESLEC VRGLRTIGEQ MWEIYSGDKV VDMLGIHLVA
701: YPISVTGDGA VEEVGDGCFP DTKTLVKGKR SKMFPPVLTT

Arabidopsis Description

PLDALPHA4Phospholipase D alpha 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9C888]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.