CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
vacuole 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d005770_P001	Maize	cytosol	86.7	94.72
Os09t0421300-01	Rice	cytosol	81.74	82.74
TraesCS5A01G223500.1	Wheat	cytosol	80.53	80.63
TraesCS5D01G231100.1	Wheat	cytosol	80.77	80.48
TraesCS5B01G222500.1	Wheat	cytosol	79.93	80.02
HORVU5Hr1G064520.1	Barley	cytosol	79.81	79.42
HORVU7Hr1G082870.1	Barley	cytosol	49.58	74.68
KXG31749	Sorghum	cytosol	50.54	51.48
EES17463	Sorghum	cytosol	50.18	51.05
OQU77524	Sorghum	plastid	50.42	50.79
EER88618	Sorghum	cytosol	49.7	50.37
PGSC0003DMT400006661	Potato	cytosol	34.95	50.26
KXG39222	Sorghum	cytosol, peroxisome, vacuole	48.97	47.93
VIT_09s0002g02390.t01	Wine grape	cytosol	42.68	46.94
KRH10002	Soybean	cytosol	42.44	46.25
EES10287	Sorghum	cytosol	46.67	46.06
CDY24051	Canola	cytosol	40.99	44.72
CDY33065	Canola	cytosol	40.75	44.46
Bra037982.1-P	Field mustard	cytosol	40.75	44.28
AT1G55180.1	Thale cress	cytosol	40.51	43.96
KRH47139	Soybean	cytosol	40.75	43.82
KRH44164	Soybean	cytosol	40.87	43.56
KXG40331	Sorghum	cytosol	40.99	41.04
KXG36094	Sorghum	cytosol	40.87	39.35
EER98315	Sorghum	cytosol	39.06	38.5
OQU84227	Sorghum	cytosol	41.6	37.43
KRH23329	Soybean	cytosol	10.16	31.7
EER92041	Sorghum	cytosol, nucleus, peroxisome	39.78	31.24
OQU77834	Sorghum	endoplasmic reticulum, golgi	17.17	20.61
KXG32384	Sorghum	cytosol, nucleus, peroxisome	22.61	16.68
OQU77836	Sorghum	cytosol	6.89	11.9

Protein Annotations

KEGG:00564+3.1.4.4	KEGG:00565+3.1.4.4	Gene3D:2.60.40.150	Gene3D:3.30.870.10	MapMan:5.7.2.4.1	EntrezGene:8060260
InterPro:C2_dom	InterPro:C2_domain_sf	UniProt:C5XCW2	EnsemblPlants:EER98913	ProteinID:EER98913	ProteinID:EER98913.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0004630	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575
GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016020
GO:GO:0016042	GO:GO:0016787	GO:GO:0046470	GO:GO:0070290	InterPro:IPR000008	InterPro:IPR001736
InterPro:IPR035892	PFAM:PF00168	PFAM:PF00614	PFAM:PF12357	PFAM:PF13091	PIRSF:PIRSF036470
InterPro:PLD-like_dom	InterPro:PLipase_D/transphosphatidylase	InterPro:PLipase_D_C	InterPro:PLipase_D_fam	InterPro:PLipase_D_pln	PFscan:PS50035
PANTHER:PTHR18896	PANTHER:PTHR18896:SF66	MetaCyc:PWY-3561	MetaCyc:PWY-7039	SMART:SM00155	EnsemblPlantsGene:SORBI_3002G204500
SUPFAM:SSF49562	SUPFAM:SSF56024	UniParc:UPI0001A84035	RefSeq:XP_002462392.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr2:-:59598840..59602119

Molecular Weight (calculated)

92014.5 Da

IEP (calculated)

5.555

GRAVY (calculated)

-0.322

Length

827 amino acids

Sequence
(BLAST)

001: MGSQLEGDAT AAIAADEVVY LHGVLEATVF EAEHLHNAIH GRIMEATEKM QESLGVHCLQ HSRLYVDVDV GAARVARTRE VEFHPTRPAW NQSFRLHCAY
101: PAAAVTFTVK NQHLIGAGVL GAGSVPAARV ASGQPLECWL DLRGGEHAHE THTPSLRVRL HFFDVERDPS WGAGVRLPEF AGVKPAFFPE RTNCSVTLYQ
201: NAHLSDAFDP GVRLDGGLAY RPARLWEDLF AAIRDARRFV YVAGWSVNTE ITLVRDAGRR AAVPEGAEGV TLGELLKRKA DEGVAVLVMP WQDNTSVSFL
301: GNAGLMKTHD EETRRFFEGT NVRCFLCPRN ADASLTMVQH VETSAEFTHH QKTVTLDAAT PGTDERHVVS FIGGIDLCDG RYDDENHTLF RDLDTTYLHD
401: FMQNNYKHSS LRRGGPREPW HDVHCRLEGP AAWDVLANFE QRWRKQAPED MRGCLLDLSP ATFPDPVSND PWNVQVFRSI DDASVVGFPS DPAEAAAMGL
501: ASGKDVTVDR SIQIGYVEAV RRARRFIYIE NQYFLGGCAS WAEDRDAGCL NLVPVEIALK VAAKIRRGER FAVYVVTPMW PEGVPAGEAV QAILLWNRRT
601: VEMMYGVVAK AIDDAGLRGQ AHPCDYLNFF CLGNREAPLP GEYSPPETPE EDTDYWRAQV NRRGPIYVHA KLMIVDDEYV MVGSANLNER SLAGNRDSEI
701: AQGSYQPAHL NGPCRRARGQ VHGFRMSLWH EHFIMGRHAS EDADDGDLFL EPESLECVRA VRRAAERLWD AYTQDRVEDL PGHLLPFPIT VSEVGEVDDL
801: PADGCFPDTR APVRGRKAVK LPDILTT

Best Arabidopsis Sequence Match ( AT1G52570.1 )
(BLAST)

001: MEECLLHGRL HATIYEVDHL HAEGGRSGFL GSILANVEET IGVGKGETQL YATIDLEKAR VGRTRKITKE PKNPKWFESF HIYCGHMAKH VIFTVKDANP
101: IGATLIGRGY IPVEDILHGE EVDRWVDILD NEKNPIAGGS KIHVKLQYFG VEKDKNWNRG IKSAKFPGVP YTFFSQRRGC KVSLYQDAHI PGNFVPKIPL
201: AGGKNYEPHR CWEDIFDAIT NAKHLIYITG WSVYTEISLV RDSRRPKQGG DVTVGELLKK KASEGVKVIL LVWDDRTSVD LLKKDGLMAT HDEETENFFR
301: GTDVNCILCP RNPDDGGSIV QNLQISTMFT HHQKIVVVDS EMPSGGSRSR RIVSFVGGLD LCDGRYDTPF HSLFRTLDTA HHDDFHQPNF TGAAITKGGP
401: REPWHDIHCR LEGPIAWDVL YNFEQRWSRQ GGKDILVKMR ELGDIIIPPS PVLFSEDHDV WNVQLFRSID GGAAAGFPDS PEAAAEAGLV SGKDNIIDRS
501: IQDAYIHAIR RAKDFIYIEN QYFLGSSFAW SADGIKPEEI NALHLIPKEL SLKIVSKIKA GEKFKVYVVV PMWPEGIPES GSVQAILDWQ KRTMEMMYKD
601: VIKALRENGL EGEDPRDYLT FFCLGNREVK KDGEYEPSEK PEPDTDYIRA QEARRFMIYV HTKMMIVDDE YIIIGSANIN QRSMDGARDS EIAMGGYQPY
701: HLSTRQPARG QIHGFRMSLW YEHLGMLDET FLDPSSQECI QKVNRVADKY WDLYSSESLE HDLPGHLLRY PIGIASEGNI TELPGCEFFP DTKARILGVK
801: SDYMPPILTT

Arabidopsis Description

PLDALPHA2Phospholipase D alpha 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SSQ9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.