CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
vacuole 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d005484_P003	Maize	cytosol	92.13	88.95
Os07t0260400-01	Rice	cytosol, plasma membrane	88.32	88.42
HORVU5Hr1G060030.2	Barley	cytosol	87.25	87.25
TraesCS5B01G200600.1	Wheat	cytosol	87.13	86.51
TraesCS5A01G202000.1	Wheat	cytosol	86.41	86.41
TraesCS5D01G208300.2	Wheat	cytosol	86.65	86.04
GSMUA_Achr7P23470_001	Banana	cytosol	69.61	74.21
VIT_12s0035g00200.t01	Wine grape	cytosol, nucleus, peroxisome	52.44	69.62
KRH59149	Soybean	cytosol	66.15	64.76
KRH43039	Soybean	cytosol	65.79	64.41
Solyc10g024370.1.1	Tomato	cytosol	61.86	61.86
PGSC0003DMT400011523	Potato	cytosol	61.62	60.4
KXG36094	Sorghum	cytosol	61.5	60.07
Solyc01g103910.1.1	Tomato	cytosol	49.46	59.54
KXG40331	Sorghum	cytosol	49.7	50.48
KXG31749	Sorghum	cytosol	46.36	47.91
OQU77524	Sorghum	plastid	46.13	47.14
EES17463	Sorghum	cytosol	45.53	46.99
OQU84227	Sorghum	cytosol	51.25	46.79
EER88618	Sorghum	cytosol	44.58	45.83
KXG39222	Sorghum	cytosol, peroxisome, vacuole	42.67	42.37
EES10287	Sorghum	cytosol	41.48	41.53
EER92041	Sorghum	cytosol, nucleus, peroxisome	52.09	41.5
EER98913	Sorghum	cytosol	38.5	39.06
OQU77834	Sorghum	endoplasmic reticulum, golgi	18.83	22.93
KXG32384	Sorghum	cytosol, nucleus, peroxisome	24.31	18.2
OQU77836	Sorghum	cytosol	6.79	11.9

Protein Annotations

KEGG:00564+3.1.4.4	KEGG:00565+3.1.4.4	Gene3D:2.60.40.150	Gene3D:3.30.870.10	MapMan:5.7.2.4.3	EntrezGene:8054460
InterPro:C2_dom	InterPro:C2_domain_sf	UniProt:C5X2U3	EnsemblPlants:EER98315	ProteinID:EER98315	ProteinID:EER98315.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0004630	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575
GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016020
GO:GO:0016042	GO:GO:0016787	GO:GO:0046470	GO:GO:0070290	InterPro:IPR000008	InterPro:IPR001736
InterPro:IPR035892	PFAM:PF00168	PFAM:PF00614	PFAM:PF12357	PIRSF:PIRSF036470	InterPro:PLipase_D/transphosphatidylase
InterPro:PLipase_D_C	InterPro:PLipase_D_fam	InterPro:PLipase_D_pln	PFscan:PS50004	PFscan:PS50035	PANTHER:PTHR18896
PANTHER:PTHR18896:SF112	MetaCyc:PWY-3561	MetaCyc:PWY-7039	SMART:SM00155	SMART:SM00239	EnsemblPlantsGene:SORBI_3002G098900
SUPFAM:SSF49562	SUPFAM:SSF56024	UniParc:UPI0001A83EC6	RefSeq:XP_002461794.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr2:-:10600605..10606169

Molecular Weight (calculated)

94836.0 Da

IEP (calculated)

7.116

GRAVY (calculated)

-0.433

Length

839 amino acids

Sequence
(BLAST)

001: MGKHSAESGV SMLLHGDLDL QIIEAKCLPN MDLMTERMRK CFTGYGACST DCGKSENAHP DMRKIITSDP YVSVCLSGAT VAQTRVIPNS ENPKWDEHFY
101: VQVAHSVSRI EFLVKDNDVF GAELIGVATI PVEHITPGDM VGGWFPISGQ YSNPMKPSPE LHLNIQYKPI DMNPLYKDGV GADGPQSVGV PNAYFPLRKG
201: GRVTLYQDAH VPDNFQPQIE IDGGRTYEQN KCWEDICHAI IEAHHLIYIV GWSLYHPVKL VRESTKPVPN GNPVTIGEIL KRKVQEGVRV IVLLWDDKTS
301: HDKFLLKTDG LMHTHDEEAR KYFRHSGVHC VLSPRYASNK LSIFKQQVVG TLFTHHQKCV IVDTQATGNN RKITAFIGGL DLCDGRYDTP EHRLFKDLDT
401: IFKDDFHNPT FPVNKHGPRQ PWHDLHCKIE GPAAYDILTN FEQRWRKSAK WKVSVRRAVS WHHDTLVKID RMSWIVSPTA DELNAHVVEE KDPENWHVQV
501: FRSIDSGSVK GFPKLVQEAE SQNLVCAKNL QIDKSIHNAY VKAIRSAQHF VYIENQYFIG SSYYWSAHRS AGAENLIPIE LAIKIARKIK AKERFAAYIV
601: IPMWPEGNPT TAAMQEILYW QGHTMSMMYK IVADALRKEG LHESHPQEYL NFYCLGKREG SNEVSSTSNS NENSALRLAQ KFRRFMIYVH SKGMIVDDEY
701: VLIGSANINQ RSMDGSRDTE IAMGAYQPHY SWAGSGSPPK GQVYGYRMSL WAEHLGTVEE CFRRPESEEC VQLVNQMADD NWASYVSPQM VDMKGHLMKY
801: PVKVEQDGRV GPLPGQESFP DVGGKVLGTH SSLPNALTT

Best Arabidopsis Sequence Match ( AT4G35790.2 )
(BLAST)

001: MAEKVSEDVM LLHGDLDLKI VKARRLPNMD MFSEHLRRLF TACNACARPT DTDDVDPRDK GEFGDKNIRS HRKVITSDPY VTVVVPQATL ARTRVLKNSQ
101: EPLWDEKFNI SIAHPFAYLE FQVKDDDVFG AQIIGTAKIP VRDIASGERI SGWFPVLGAS GKPPKAETAI FIDMKFTPFD QIHSYRCGIA GDPERRGVRR
201: TYFPVRKGSQ VRLYQDAHVM DGTLPAIGLD NGKVYEHGKC WEDICYAISE AHHMIYIVGW SIFHKIKLVR ETKVPRDKDM TLGELLKYKS QEGVRVLLLV
301: WDDKTSHDKF GIKTPGVMGT HDEETRKFFK HSSVICVLSP RYASSKLGLF KQQVVGTLFT HHQKCVLVDT QAVGNNRKVT AFIGGLDLCD GRYDTPEHRI
401: LHDLDTVFKD DFHNPTFPAG TKAPRQPWHD LHCRIDGPAA YDVLINFEQR WRKATRWKEF SLRLKGKTHW QDDALIRIGR ISWILSPVFK FLKDGTSIIP
501: EDDPCVWVSK EDDPENWHVQ IFRSIDSGSV KGFPKYEDEA EAQHLECAKR LVVDKSIQTA YIQTIRSAQH FIYIENQYFL GSSYAWPSYR DAGADNLIPM
601: ELALKIVSKI RAKERFAVYV VIPLWPEGDP KSGPVQEILY WQSQTMQMMY DVIAKELKAV QSDAHPLDYL NFYCLGKREQ LPDDMPATNG SVVSDSYNFQ
701: RFMIYVHAKG MIVDDEYVLM GSANINQRSM AGTKDTEIAM GAYQPNHTWA HKGRHPRGQV YGYRMSLWAE HLGKTGDEFV EPSDLECLKK VNTISEENWK
801: RFIDPKFSEL QGHLIKYPLQ VDVDGKVSPL PDYETFPDVG GKIIGAHSMA LPDTLTT

Arabidopsis Description

PLDDELTAPhospholipase D delta [Source:UniProtKB/Swiss-Prot;Acc:Q9C5Y0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.