CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
extracellular 1
cytosol 2
endoplasmic reticulum 1
vacuole 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d046508_P001	Maize	cytosol, mitochondrion, plasma membrane	95.1	95.1
Os06t0604400-01	Rice	plasma membrane	85.54	85.43
HORVU7Hr1G089960.3	Barley	cytosol	84.31	83.9
TraesCS7A01G376500.3	Wheat	cytosol	83.7	83.29
TraesCS7D01G372800.1	Wheat	cytosol	83.58	83.17
TraesCSU01G145400.1	Wheat	cytosol	82.35	81.85
TraesCS4B01G377600.1	Wheat	cytosol	81.99	81.49
TraesCS7B01G277900.1	Wheat	plastid	83.82	80.38
HORVU0Hr1G009480.5	Barley	extracellular, peroxisome	61.4	76.61
GSMUA_Achr10P...	Banana	cytosol, nucleus, peroxisome	15.69	73.99
EES17463	Sorghum	cytosol	71.57	71.83
KXG31749	Sorghum	cytosol	71.32	71.67
Os06t0604200-02	Rice	cytosol, plasma membrane	72.06	70.67
Os06t0604300-01	Rice	plasma membrane	72.79	70.55
GSMUA_Achr10P...	Banana	cytosol	26.1	69.84
OQU77524	Sorghum	plastid	68.75	68.33
EES10287	Sorghum	cytosol	64.58	62.89
KXG39222	Sorghum	cytosol, peroxisome, vacuole	59.31	57.28
EER98913	Sorghum	cytosol	50.37	49.7
EER98315	Sorghum	cytosol	45.83	44.58
KXG40331	Sorghum	cytosol	44.61	44.07
KXG36094	Sorghum	cytosol	46.08	43.77
GSMUA_Achr6P35870_001	Banana	plasma membrane	46.32	39.75
OQU84227	Sorghum	cytosol	43.26	38.41
EER92041	Sorghum	cytosol, nucleus, peroxisome	45.34	35.14
OQU77834	Sorghum	endoplasmic reticulum, golgi	18.26	21.63
KXG32384	Sorghum	cytosol, nucleus, peroxisome	24.26	17.66
OQU77836	Sorghum	cytosol	7.48	12.73

Protein Annotations

KEGG:00564+3.1.4.4	KEGG:00565+3.1.4.4	Gene3D:2.60.40.150	Gene3D:3.30.870.10	MapMan:5.7.2.4.1	EntrezGene:8065077
InterPro:C2_dom	InterPro:C2_domain_sf	UniProt:C5Z5N7	EnsemblPlants:EER88618	ProteinID:EER88618	ProteinID:EER88618.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0004630	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575
GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016020
GO:GO:0016042	GO:GO:0016787	GO:GO:0046470	GO:GO:0070290	InterPro:IPR000008	InterPro:IPR001736
InterPro:IPR035892	PFAM:PF00168	PFAM:PF00614	PFAM:PF12357	PIRSF:PIRSF036470	InterPro:PLipase_D/transphosphatidylase
InterPro:PLipase_D_C	InterPro:PLipase_D_fam	InterPro:PLipase_D_pln	PFscan:PS50035	PANTHER:PTHR18896	PANTHER:PTHR18896:SF59
MetaCyc:PWY-3561	MetaCyc:PWY-7039	SMART:SM00155	SMART:SM00239	EnsemblPlantsGene:SORBI_3010G185600	SUPFAM:SSF49562
SUPFAM:SSF56024	unigene:Sbi.1658	UniParc:UPI0001A893F2	RefSeq:XP_002437251.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr10:+:52575331..52580150

Molecular Weight (calculated)

91271.0 Da

IEP (calculated)

7.246

GRAVY (calculated)

-0.290

Length

816 amino acids

Sequence
(BLAST)

001: MAHLLLHGTL DATILEADHL TNPTRATGGA PGIFRKFVEG FEESLGLGQG STRLYATVDL GRARVGRTRV ITGDPVNPRW YEAFHIYCAH FASNVVFSVK
101: AAQPIGATLI GRAYLPVRDL IAGQEIERSL DILNASKKRL PHGPKLRVRL RFQDVAADRR GWGRGVGGAR YPGVPYTFFS QRPGCRVTLY QDAHTPDAFA
201: PRIPLAGGRF YEPGRCWEDV FDAISNARHL IYITGWSVYT EITLLRDGSR PRPGGDATLG ELLKRKASEG VRVLMLVWDD RTSVESLGMK WGFMSTHDAE
301: TAEYFRGSDV HCVLCPRNPD AGSSAVMGAQ IAYMITHHQK IIVVDHEMPA RHSDRRRILS FVGGLDLCDG RYDTQFHSLF RTLDTAHHKD FHQPNLTGAS
401: INNGGPREPW HDIHSKIEGP AAWDVLYNFE QRWRKQGGSI DLLVDLKALV NLIIPPSPVM FPEDQETWNV QLFRSIDGGA CYGFPSTPEA AAQSGLVSGK
501: NNVLDRSIQD AYIHAIRRAK HFIYIENQYF LGSSFGWKAD GIKPEEIEAL HLIPRELSLK IVSKIEAGEH FAVYVVLPMW PEGPPAGGSV QAILDWQRRT
601: MDMMYNDISV ALEAKRIDRN PRDYLTFFCL GNREVKMSGE YEPSGRPLDG TDYARAQNAR RFMIYVHSKM MIVDDEYIIV GSANINQRSM DGGRDSEIAM
701: GAYQPCHLNT KGQVARGQVH GFRMSLWYEH LGVLHDDFLN PGSLECVQRV NQMADKYWDL YASDSLDADL PGHLLRYPVT VTKEGTVTEL PGAKFFPDTQ
801: ALVLGALGKF PPFLTT

Best Arabidopsis Sequence Match ( AT1G52570.2 )
(BLAST)

001: MEECLLHGRL HATIYEVDHL HAEGGRSGFL GSILANVEET IGVGKGETQL YATIDLEKAR VGRTRKITKE PKNPKWFESF HIYCGHMAKH VIFTVKDANP
101: IGATLIGRGY IPVEDILHGE EVDRWVDILD NEKNPIAGGS KIHVKLQYFG VEKDKNWNRG IKSAKFPGVP YTFFSQRRGC KVSLYQDAHI PGNFVPKIPL
201: AGGKNYEPHR CWEDIFDAIT NAKHLIYITG WSVYTEISLV RDSRRPKQGG DVTVGELLKK KASEGVKVIL LVWDDRTSVD LLKKDGLMAT HDEETENFFR
301: GTDVNCILCP RNPDDGGSIV QNLQISTMFT HHQKIVVVDS EMPSGGSRSR RIVSFVGGLD LCDGRYDTPF HSLFRTLDTA HHDDFHQPNF TGAAITKGGP
401: REPWHDIHCR LEGPIAWDVL YNFEQRWSRQ GGKDILVKMR ELGDIIIPPS PVLFSEDHDV WNVQLFRSID GGAAAGFPDS PEAAAEAGLV SGKDNIIDRS
501: IQDAYIHAIR RAKDFIYIEN QYFLGSSFAW SADGIKPEEI NALHLIPKEL SLKIVSKIKA GEKFKVYVVV PMWPEGIPES GSVQAILDWQ KRTMEMMYKD
601: VIKALRENGL EGEDPRDYLT FFCLGNREVK KDGEYEPSEK PEPDTDYIRA QEARRFMIYV HTKMMIVDDE YIIIGSANIN QRSMDGARDS EIAMGGYQPY
701: HLSTRQPARG QIHGFRMSLW YEHLGMLDET FLDPSSQECI QKVNRVADKY WDLYSSESLE HDLPGHLLRY PIGIASEGNI TELPGCEFFP DTKARILGVK
801: SDYMPPILTT

Arabidopsis Description

PLDALPHA2Phospholipase D alpha 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SSQ9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.