Factsheet for Os06t0604200-02

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, cytosol

Predictor Summary:

nucleus 1
extracellular 1
cytosol 3
endoplasmic reticulum 1
vacuole 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os06t0604300-01	Rice	plasma membrane	84.5	83.49
Os06t0604400-01	Rice	plasma membrane	72.48	73.81
EER88618	Sorghum	cytosol	70.67	72.06
Zm00001d046508_P001	Maize	cytosol, mitochondrion, plasma membrane	70.31	71.69
TraesCSU01G145400.1	Wheat	cytosol	70.31	71.25
TraesCS4B01G377600.1	Wheat	cytosol	70.31	71.25
HORVU7Hr1G089960.3	Barley	cytosol	70.07	71.1
TraesCS7A01G376500.3	Wheat	cytosol	70.07	71.1
TraesCS7D01G372800.1	Wheat	cytosol	69.83	70.85
GSMUA_Achr10P...	Banana	cytosol, nucleus, peroxisome	14.54	69.94
TraesCS7B01G277900.1	Wheat	plastid	69.95	68.39
HORVU0Hr1G009480.5	Barley	extracellular, peroxisome	52.52	66.82
GSMUA_Achr10P...	Banana	cytosol	24.16	65.9
Os01t0172400-03	Rice	plastid	63.82	65.39
Os05t0171000-01	Rice	plasma membrane	62.02	62.62
Os03t0391400-01	Rice	plasma membrane	31.73	60.27
Os08t0401800-00	Rice	plasma membrane	45.91	47.45
Os09t0421300-01	Rice	cytosol	45.91	46.76
Os03t0119100-01	Rice	plasma membrane	44.35	44.19
Os07t0260400-01	Rice	cytosol, plasma membrane	43.63	43.32
Os09t0543100-02	Rice	plasma membrane	43.27	42.15
GSMUA_Achr6P35870_001	Banana	plasma membrane	42.67	37.33
Os10t0524400-01	Rice	plasma membrane	43.51	34.61
Os03t0840800-01	Rice	cytosol	14.18	33.24
Os02t0120200-01	Rice	extracellular	19.59	17.91
Os05t0358700-01	Rice	cytosol, plasma membrane	1.2	5.75

Protein Annotations

KEGG:00564+3.1.4.4	KEGG:00565+3.1.4.4	Gene3D:2.60.40.150	Gene3D:3.30.870.10	EntrezGene:4341467	MapMan:5.7.2.4.1
EMBL:AK121264	ProteinID:BAD35529.1	ProteinID:BAF19929.1	ProteinID:BAS98515.1	InterPro:C2_dom	InterPro:C2_domain_sf
GO:GO:0003674	GO:GO:0003824	GO:GO:0004630	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575
GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016020
GO:GO:0016042	GO:GO:0016787	GO:GO:0046470	GO:GO:0070290	InterPro:IPR000008	InterPro:IPR001736
InterPro:IPR035892	EnsemblPlantsGene:Os06g0604200	EnsemblPlants:Os06t0604200-02	PFAM:PF00168	PFAM:PF00614	PFAM:PF12357
PIRSF:PIRSF036470	InterPro:PLipase_D/transphosphatidylase	InterPro:PLipase_D_C	InterPro:PLipase_D_fam	InterPro:PLipase_D_pln	PFscan:PS50035
PANTHER:PTHR18896	PANTHER:PTHR18896:SF59	UniProt:Q69X22	SMART:SM00155	SMART:SM00239	SUPFAM:SSF49562
SUPFAM:SSF56024	UniParc:UPI0000403811	RefSeq:XP_015641366.1	SEG:seg	:	:

Description

PHOSPHOLIPASE D ALPHA 4Chloroplast-localized phospholipase D, Herbivore defense (Os06t0604200-02)

Coordinates

chr6:-:23908918..23913796

Molecular Weight (calculated)

92518.8 Da

IEP (calculated)

6.359

GRAVY (calculated)

-0.324

Length

832 amino acids

Sequence
(BLAST)

001: MAEQQLMHGT LDATIFEATN LTNPTRLTGS APEGIRKWWE GVEKTTGVGQ GGTRLYATVD LGKARLGRTR VIDDEPVNPR WDERFHLYCA HFADNVVFSV
101: KVSLPIDAAL IGRAYLPVGD LLSGEVVERK LDILDEHKNK LPHGPTIHVR LQFKDVAVDG DGKWWGAGVG NAGYAGVPCT YFKQHTGCGV TLYQDAHVPD
201: TFAPTIPLAG GAHYQQGRCW EDVFDAISNA KHLIYITGWS VFTDITLIRD PSRQRPGGDA TIGELLKRKA SEGVRVLMLV WNDVTSLQIL QSLGIKWGFS
301: QTHDAETFQY FEDTDVHCVV CARHPDAGGS IVMGVKVPFA STHHQKTVIV DHDMPAGAGS GLRSIVSFVG GLDLCDGRYD TQSHSLFRTL DAAHHKDFHQ
401: PSIDDAELAK GGPREPWHDI HSRLEGPVAW DVLYNFEQRW RKQSGHGDLL VNLTALEHLI APQSAMKLPV IGNDDHEAWN VQVFRSIDGG ACDGFPSSPD
501: AAARLDLVSG KNNVIERSIQ DAYIHAIRRA RDFIYIENQY FIGSSYGWRP DDGVRPEDVE AVNLIPRELS LKIMSKIAAG ERFTVYVVVP MWPEGHPDSQ
601: AMQAILDWQR RTMEMMYADI AGALKAKRMD ADPRDYLTFF CLGNREVKRS GEYVPGHHPR DGTPYAKAQK TRRFMIYVHS KMMIVDDEYI IVGSANINQR
701: SMDGGRDSEI AMGAFQPHHL NIGGQLARGQ IHGFRMSLWY EHLGGEPHDD FLHPGSLECV RRVNEMANKH WELYASEELH EDLPGHLLTY PIAVAKDGTV
801: AALPGAKFFP DTEAPVLGKK AINPLMTPDI TS

Best Arabidopsis Sequence Match ( AT1G52570.1 )
(BLAST)

001: MEECLLHGRL HATIYEVDHL HAEGGRSGFL GSILANVEET IGVGKGETQL YATIDLEKAR VGRTRKITKE PKNPKWFESF HIYCGHMAKH VIFTVKDANP
101: IGATLIGRGY IPVEDILHGE EVDRWVDILD NEKNPIAGGS KIHVKLQYFG VEKDKNWNRG IKSAKFPGVP YTFFSQRRGC KVSLYQDAHI PGNFVPKIPL
201: AGGKNYEPHR CWEDIFDAIT NAKHLIYITG WSVYTEISLV RDSRRPKQGG DVTVGELLKK KASEGVKVIL LVWDDRTSVD LLKKDGLMAT HDEETENFFR
301: GTDVNCILCP RNPDDGGSIV QNLQISTMFT HHQKIVVVDS EMPSGGSRSR RIVSFVGGLD LCDGRYDTPF HSLFRTLDTA HHDDFHQPNF TGAAITKGGP
401: REPWHDIHCR LEGPIAWDVL YNFEQRWSRQ GGKDILVKMR ELGDIIIPPS PVLFSEDHDV WNVQLFRSID GGAAAGFPDS PEAAAEAGLV SGKDNIIDRS
501: IQDAYIHAIR RAKDFIYIEN QYFLGSSFAW SADGIKPEEI NALHLIPKEL SLKIVSKIKA GEKFKVYVVV PMWPEGIPES GSVQAILDWQ KRTMEMMYKD
601: VIKALRENGL EGEDPRDYLT FFCLGNREVK KDGEYEPSEK PEPDTDYIRA QEARRFMIYV HTKMMIVDDE YIIIGSANIN QRSMDGARDS EIAMGGYQPY
701: HLSTRQPARG QIHGFRMSLW YEHLGMLDET FLDPSSQECI QKVNRVADKY WDLYSSESLE HDLPGHLLRY PIGIASEGNI TELPGCEFFP DTKARILGVK
801: SDYMPPILTT

Arabidopsis Description

PLDALPHA2Phospholipase D alpha 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SSQ9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.