Factsheet for Os01t0172400-03

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
extracellular 2
cytosol 2
endoplasmic reticulum 2
vacuole 2
mitochondrion 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	plastid
EpiLoc:	extracellular
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	endoplasmic reticulum, vacuole
Predotar:	plastid
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

plastid: 21433289
nucleus: 26035336
plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 26035336 doi

M Li, X Yin, K Sakata, P Yang, S Komatsu

§Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan., †Key Laboratory of Plant Germplasm Enhancement and Specialty Agriculture, Wuhan Botanical Garden, Chinese Academy of Sciences, Wuhan 430074, China., ‡National Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan.

msms PMID: 21433289 doi

S Reiland, J Grossmann, K Baerenfaller, P Gehrig, A Nunes-Nesi, AR Fernie, W Gruissem, S Baginsky

Department of Biology, Plant Biotechnology, ETH Zurich, Zurich, Switzerland.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG31749	Sorghum	cytosol	91.01	91.01
Zm00001d039670_P004	Maize	cytosol	90.39	90.39
TraesCS3A01G130000.1	Wheat	plastid	89.78	89.78
TraesCS3B01G149100.1	Wheat	unclear	89.66	89.66
TraesCS3D01G130900.1	Wheat	golgi	89.53	89.53
Zm00001d008727_P002	Maize	cytosol	89.41	89.41
HORVU3Hr1G024530.2	Barley	plastid	88.92	88.92
EES17463	Sorghum	cytosol	87.68	87.58
KRH44445	Soybean	cytosol	77.96	80.33
KRH47460	Soybean	cytosol	79.68	79.98
VIT_09s0002g06760.t01	Wine grape	cytosol	79.68	79.68
KRH23570	Soybean	endoplasmic reticulum	79.06	79.55
AT3G15730.1	Thale cress	cytosol	77.96	78.15
Os05t0171000-01	Rice	plasma membrane	78.94	77.79
AT1G52570.1	Thale cress	cytosol	77.46	77.65
CDY21865	Canola	cytosol	77.22	77.22
Bra040960.1-P	Field mustard	cytosol	76.97	76.97
CDY47540	Canola	cytosol	76.85	76.85
CDY30108	Canola	cytosol	76.6	76.79
Bra027209.1-P	Field mustard	cytosol	76.6	76.79
CDX97705	Canola	cytosol	76.6	76.79
Bra021132.1-P	Field mustard	cytosol	76.72	76.72
CDY60551	Canola	cytosol	75.99	75.99
Bra030375.1-P	Field mustard	cytosol	75.86	75.86
KRH09736	Soybean	cytosol, endoplasmic reticulum, nucleus	66.38	75.81
PGSC0003DMT400024831	Potato	extracellular	74.88	75.34
Solyc08g066800.2.1	Tomato	plastid	74.88	75.34
CDY20149	Canola	cytosol, nucleus, peroxisome	19.46	74.18
Solyc08g066790.2.1	Tomato	plastid	73.03	73.48
CDY63527	Canola	cytosol	29.93	72.75
CDY20148	Canola	cytosol, peroxisome, plastid	35.47	72.18
CDX87920	Canola	cytosol	30.3	71.72
PGSC0003DMT400024828	Potato	cytosol	11.21	71.65
Os06t0604400-01	Rice	plasma membrane	71.67	71.24
GSMUA_Achr10P...	Banana	cytosol, plastid	39.53	70.24
KRH09735	Soybean	cytosol	38.79	67.89
Os06t0604200-02	Rice	cytosol, plasma membrane	65.39	63.82
Os03t0391400-01	Rice	plasma membrane	34.36	63.7
Os06t0604300-01	Rice	plasma membrane	64.66	62.35
Os08t0401800-00	Rice	plasma membrane	51.23	51.68
Os09t0421300-01	Rice	cytosol	49.51	49.2
Os07t0260400-01	Rice	cytosol, plasma membrane	46.67	45.23
Os09t0543100-02	Rice	plasma membrane	47.29	44.96
Os03t0119100-01	Rice	plasma membrane	44.95	43.71
Os10t0524400-01	Rice	plasma membrane	44.95	34.89
Os03t0840800-01	Rice	cytosol	15.02	34.37
Os02t0120200-01	Rice	extracellular	20.44	18.24
Os05t0358700-01	Rice	cytosol, plasma membrane	1.85	8.62

Protein Annotations

KEGG:00564+3.1.4.4	KEGG:00565+3.1.4.4	Gene3D:2.60.40.150	Gene3D:3.30.870.10	EntrezGene:4327647	MapMan:5.7.2.4.1
EMBL:AP003215	EMBL:AP003282	ProteinID:BAA19467.1	ProteinID:BAF04067.1	ProteinID:BAS70634.1	InterPro:C2_dom
InterPro:C2_domain_sf	EMBL:D73411	ProteinID:EEE53959.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004630
GO:GO:0005488	GO:GO:0005509	GO:GO:0005575	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009987	GO:GO:0016020	GO:GO:0016042	GO:GO:0016787	GO:GO:0046470
GO:GO:0070290	InterPro:IPR000008	InterPro:IPR001736	InterPro:IPR035892	EnsemblPlantsGene:Os01g0172400	EnsemblPlants:Os01t0172400-03
PFAM:PF00168	PFAM:PF00614	PFAM:PF12357	PIRSF:PIRSF036470	InterPro:PLipase_D/transphosphatidylase	InterPro:PLipase_D_C
InterPro:PLipase_D_fam	InterPro:PLipase_D_pln	PFscan:PS50035	PANTHER:PTHR18896	PANTHER:PTHR18896:SF67	UniProt:Q43007
SMART:SM00155	SMART:SM00239	SUPFAM:SSF49562	SUPFAM:SSF56024	UniParc:UPI0000D7E690	RefSeq:XP_015646609.1

Description

PHOSPHOLIPASE D ALPHA 1Similar to Phospholipase D alpha 1. (Os01t0172400-01);Phospholipase D alpha 1 precursor (EC 3.1.4.4) (PLD alpha 1) (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1). (Os01t0172400-02);Phospholipase D alpha 1 precursor (EC 3.1.4.4) (PLD alpha 1) (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1). (Os01t0172400-03);Similar to Phospholipase D alpha 1. (Os01t0172400-04);Similar to Phospholipase D alpha 1. (Os01t0172400-05)

Coordinates

chr1:-:3724684..3728551

Molecular Weight (calculated)

92224.4 Da

IEP (calculated)

5.820

GRAVY (calculated)

-0.443

Length

812 amino acids

Sequence
(BLAST)

001: MAQMLLHGTL HATIFEAASL SNPHRASGSA PKFIRKFVEG IEDTVGVGKG ATKVYSTIDL EKARVGRTRM ITNEPINPRW YESFHIYCAH MASNVIFTVK
101: IDNPIGATNI GRAYLPVQEL LNGEEIDRWL DICDNNREPV GESKIHVKLQ YFDVSKDRNW ARGVRSTKYP GVPYTFFSQR QGCKVTLYQD AHVPDNFIPK
201: IPLADGKNYE PHRCWEDIFD AISNAQHLIY ITGWSVYTEI TLVRDSNRPK PGGDVTLGEL LKKKASEGVR VLMLVWDDRT SVGLLKRDGL MATHDEETEN
301: YFHGSDVNCV LCPRNPDDSG SIVQDLSIST MFTHHQKIVV VDHELPNQGS QQRRIVSFVG GLDLCDGRYD TQYHSLFRTL DSTHHDDFHQ PNFATASIKK
401: GGPREPWHDI HSRLEGPIAW DVLYNFEQRW RKQGGKDLLL QLRDLSDTII PPSPVMFPED RETWNVQLFR SIDGGAAFGF PDTPEEAAKA GLVSGKDQII
501: DRSIQDAYIH AIRRAKNFIY IENQYFLGSS YAWKPEGIKP EDIGALHLIP KELALKVVSK IEAGERFTVY VVVPMWPEGV PESGSVQAIL DWQRRTMEMM
601: YTDITEALQA KGIEANPKDY LTFFCLGNRE VKQAGEYQPE EQPEADTDYS RAQEARRFMI YVHTKMMIVD DEYIIIGSAN INQRSMDGAR DSEIAMGGYQ
701: PYHLATRQPA RGQIHGFRMA LWYEHLGMLD DVFQRPESLE CVQKVNRIAE KYWDMYSSDD LQQDLPGHLL SYPIGVASDG VVTELPGMEY FPDTRARVLG
801: AKSDYMPPIL TS

Best Arabidopsis Sequence Match ( AT3G15730.1 )
(BLAST)

001: MAQHLLHGTL HATIYEVDAL HGGGVRQGFL GKILANVEET IGVGKGETQL YATIDLQKAR VGRTRKIKNE PKNPKWYESF HIYCAHLASD IIFTVKDDNP
101: IGATLIGRAY IPVDQVINGE EVDQWVEILD NDRNPIQGGS KIHVKLQYFH VEEDRNWNMG IKSAKFPGVP YTFFSQRQGC KVSLYQDAHI PDNFVPRIPL
201: AGGKNYEPQR CWEDIFDAIS NAKHLIYITG WSVYAEIALV RDSRRPKPGG DVTIGELLKK KASEGVRVLL LVWDDRTSVD VLKKDGLMAT HDEETENFFR
301: GSDVHCILCP RNPDDGGSIV QSLQISTMFT HHQKIVVVDS EMPSRGGSEM RRIVSFVGGI DLCDGRYDTP FHSLFRTLDT VHHDDFHQPN FTGAAITKGG
401: PREPWHDIHS RLEGPIAWDV MYNFEQRWSK QGGKDILVKL RDLSDIIITP SPVMFQEDHD VWNVQLFRSI DGGAAAGFPE SPEAAAEAGL VSGKDNIIDR
501: SIQDAYIHAI RRAKDFIYVE NQYFLGSSFA WAADGITPED INALHLIPKE LSLKIVSKIE KGEKFRVYVV VPMWPEGLPE SGSVQAILDW QRRTMEMMYK
601: DVIQALRAQG LEEDPRNYLT FFCLGNREVK KDGEYEPAEK PDPDTDYMRA QEARRFMIYV HTKMMIVDDE YIIIGSANIN QRSMDGARDS EIAMGGYQPH
701: HLSHRQPARG QIHGFRMSLW YEHLGMLDET FLDPSSLECI EKVNRISDKY WDFYSSESLE HDLPGHLLRY PIGVASEGDI TELPGFEFFP DTKARILGTK
801: SDYLPPILTT

Arabidopsis Description

PLDALPHA1Phospholipase D alpha 1 [Source:UniProtKB/Swiss-Prot;Acc:Q38882]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.