CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra027209.1-P	Field mustard	cytosol	99.75	99.75
CDY30108	Canola	cytosol	99.01	99.01
AT3G15730.1	Thale cress	cytosol	94.2	94.2
CDY21865	Canola	cytosol	91.6	91.38
CDY20149	Canola	cytosol, nucleus, peroxisome	23.58	89.67
CDY60551	Canola	cytosol	85.31	85.1
CDY47540	Canola	cytosol	84.94	84.73
CDY20148	Canola	cytosol, peroxisome, plastid	41.48	84.21
CDX87920	Canola	cytosol	34.69	81.92
CDY63527	Canola	cytosol	33.7	81.74
VIT_09s0002g06760.t01	Wine grape	cytosol	80.12	79.93
PGSC0003DMT400073469	Potato	cytosol	78.02	78.12
KXG31749	Sorghum	cytosol	77.9	77.71
HORVU3Hr1G024530.2	Barley	plastid	77.53	77.34
Solyc06g068090.2.1	Tomato	plastid	77.16	77.26
TraesCS3A01G130000.1	Wheat	plastid	77.41	77.22
TraesCS3B01G149100.1	Wheat	unclear	77.41	77.22
TraesCS3D01G130900.1	Wheat	golgi	77.41	77.22
Zm00001d008727_P002	Maize	cytosol	77.41	77.22
Zm00001d039670_P004	Maize	cytosol	77.41	77.22
GSMUA_Achr7P10170_001	Banana	cytosol	51.11	76.67
Os01t0172400-03	Rice	plastid	76.79	76.6
KRH09736	Soybean	cytosol, endoplasmic reticulum, nucleus	66.79	76.09
EES17463	Sorghum	cytosol	76.17	75.89
PGSC0003DMT400001650	Potato	cytosol, plastid	74.81	74.72
Solyc03g116620.2.1	Tomato	plastid	74.07	73.98
TraesCS1D01G116700.1	Wheat	cytosol	71.11	70.67
OQU77524	Sorghum	plastid	71.48	70.52
TraesCS1A01G115300.1	Wheat	cytosol	70.86	70.43
Os05t0171000-01	Rice	plasma membrane	70.74	69.54
TraesCS1B01G135200.1	Wheat	cytosol	70.0	69.32
KRH09735	Soybean	cytosol	39.26	68.53
HORVU1Hr1G025370.1	Barley	cytosol	71.23	67.49
GSMUA_Achr10P...	Banana	cytosol, plastid	35.93	63.68
Zm00001d037643_P001	Maize	cytosol	70.86	63.36
CDY70643	Canola	cytosol, peroxisome	16.42	62.44
CDX88175	Canola	cytosol	57.04	62.35
CDX80505	Canola	cytosol	59.26	61.54
CDY05490	Canola	cytosol	61.85	61.47
CDY05351	Canola	cytosol	61.23	60.86
CDY13283	Canola	mitochondrion	21.11	48.44
CDX80734	Canola	cytosol	7.16	47.93
CDY28756	Canola	cytosol, extracellular	7.41	47.62
CDY51545	Canola	cytosol	8.15	46.15
CDY41006	Canola	mitochondrion	8.89	46.15
CDX86742	Canola	cytosol	45.31	43.33
CDY64184	Canola	mitochondrion	43.46	43.19
CDY35793	Canola	cytosol	46.05	43.12
CDX72557	Canola	cytosol	45.93	43.01
CDX90807	Canola	cytosol	42.84	43.0
CDY33065	Canola	cytosol	39.88	42.61
CDY47037	Canola	cytosol	46.42	42.49
CDX90808	Canola	cytosol	41.6	42.44
CDY24051	Canola	cytosol	39.63	42.35
CDY67335	Canola	cytosol	44.32	41.45
CDY41630	Canola	cytosol	44.07	41.18
CDX90066	Canola	cytosol	46.54	38.71
CDY46254	Canola	cytosol	4.57	38.14
CDY13284	Canola	cytosol	21.48	37.91
CDY52961	Canola	cytosol, nucleus, peroxisome	45.8	37.4
CDY54926	Canola	cytosol, nucleus, peroxisome	45.93	37.09
CDY15144	Canola	peroxisome	46.54	35.43
CDY42882	Canola	nucleus	12.59	31.68
CDY18811	Canola	cytosol, nucleus, peroxisome	25.06	19.39
CDX92096	Canola	nucleus	24.69	18.48
CDX95904	Canola	cytosol, nucleus, peroxisome	24.57	18.29
CDY51604	Canola	cytosol	2.72	7.8

Protein Annotations

KEGG:00564+3.1.4.4	KEGG:00565+3.1.4.4	Gene3D:2.60.40.150	Gene3D:3.30.870.10	MapMan:5.7.2.4.1	GO:A0A078E6G6
InterPro:C2_dom	InterPro:C2_domain_sf	EnsemblPlants:CDX97705	ProteinID:CDX97705	ProteinID:CDX97705.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0004630	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575	GO:GO:0006629
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016787	GO:GO:0046470
GO:GO:0070290	EnsemblPlantsGene:GSBRNA2T00104955001	InterPro:IPR000008	InterPro:IPR001736	InterPro:IPR035892	PFAM:PF00168
PFAM:PF00614	PFAM:PF12357	PFAM:PF13091	PIRSF:PIRSF036470	InterPro:PLD-like_dom	InterPro:PLipase_D/transphosphatidylase
InterPro:PLipase_D_C	InterPro:PLipase_D_fam	InterPro:PLipase_D_pln	PFscan:PS50035	PANTHER:PTHR18896	PANTHER:PTHR18896:SF109
MetaCyc:PWY-3561	MetaCyc:PWY-7039	SMART:SM00155	SMART:SM00239	SUPFAM:SSF49562	SUPFAM:SSF56024
UniParc:UPI0004EE265B	:	:	:	:	:

Description

BnaA05g23740D

Coordinates

chrLK031900:+:1076013..1079677

Molecular Weight (calculated)

91853.9 Da

IEP (calculated)

5.493

GRAVY (calculated)

-0.400

Length

810 amino acids

Sequence
(BLAST)

001: MAQHLLHGTL HATIYEVDDL HTGGLRSGFF GKILANVEET IGVGKGETQL YATIDLQRAR VGRTRKIKDE AKNPKWYESF HIYCAHLASD IIFTVKDDNP
101: IGATLIGRAY VPVDQILHGE EVDQWVEILD NDRNPIPGGS KIHVKLQYFG VEADRNWNQG IKSAKFPGVP YTFFSQRQGC KVSLYQDAHI PDNFVPRIPL
201: AGGKNYEPQR CWEDIFDAIS NAQHMIYITG WSVYTEIALV RDSRRPKPGG DMTVGELLKK KASEGVRVLL LVWDDRTSVD VLKKDGLMAT HDEETENFFR
301: GSDVHCILCP RNPDDGGSIV QNLQVSAMFT HHQKIVVVDS EMPSQGGSQM RRIVSFVGGI DLCDGRYDTP FHSLFRTLDT VHHDDFHQPN FTGAAITKGG
401: PREPWHDIHS RLEGPIAWDV LYNFEQRWSK QGGKDILVKL RELSDIIITP SPVMFQEDHD VWNVQLFRSI DGGAAAGFPE SPEAAAEAGL VSGKDNIIDR
501: SIQDAYIHAI RRAKDFIYIE NQYFLGSSFA WAADGITPED INALHLIPKE LSLKIVSKIE KGEKFRVYVV VPMWPEGLPE SASVQAILDW QRRTMQMMYK
601: DIVQALRAQG LEEDPRNYLT FFCLGNREVK KEGEYEPAER PDADSSYMRA QEARRFMIYV HTKMMIVDDE YIIIGSANIN QRSMDGARDS EIAMGGYQPH
701: QLSHRQPARG QIHGFRMSLW YEHLGMLDET FLDPSSVECI EKVNRISDKY WDLYSSESLE HDLPGHLLRY PVDVDAEGDV TEFPGFEFFP DTKARILGTK
801: SDYLPPILTT

Best Arabidopsis Sequence Match ( AT3G15730.1 )
(BLAST)

001: MAQHLLHGTL HATIYEVDAL HGGGVRQGFL GKILANVEET IGVGKGETQL YATIDLQKAR VGRTRKIKNE PKNPKWYESF HIYCAHLASD IIFTVKDDNP
101: IGATLIGRAY IPVDQVINGE EVDQWVEILD NDRNPIQGGS KIHVKLQYFH VEEDRNWNMG IKSAKFPGVP YTFFSQRQGC KVSLYQDAHI PDNFVPRIPL
201: AGGKNYEPQR CWEDIFDAIS NAKHLIYITG WSVYAEIALV RDSRRPKPGG DVTIGELLKK KASEGVRVLL LVWDDRTSVD VLKKDGLMAT HDEETENFFR
301: GSDVHCILCP RNPDDGGSIV QSLQISTMFT HHQKIVVVDS EMPSRGGSEM RRIVSFVGGI DLCDGRYDTP FHSLFRTLDT VHHDDFHQPN FTGAAITKGG
401: PREPWHDIHS RLEGPIAWDV MYNFEQRWSK QGGKDILVKL RDLSDIIITP SPVMFQEDHD VWNVQLFRSI DGGAAAGFPE SPEAAAEAGL VSGKDNIIDR
501: SIQDAYIHAI RRAKDFIYVE NQYFLGSSFA WAADGITPED INALHLIPKE LSLKIVSKIE KGEKFRVYVV VPMWPEGLPE SGSVQAILDW QRRTMEMMYK
601: DVIQALRAQG LEEDPRNYLT FFCLGNREVK KDGEYEPAEK PDPDTDYMRA QEARRFMIYV HTKMMIVDDE YIIIGSANIN QRSMDGARDS EIAMGGYQPH
701: HLSHRQPARG QIHGFRMSLW YEHLGMLDET FLDPSSLECI EKVNRISDKY WDFYSSESLE HDLPGHLLRY PIGVASEGDI TELPGFEFFP DTKARILGTK
801: SDYLPPILTT

Arabidopsis Description

PLDALPHA1Phospholipase D alpha 1 [Source:UniProtKB/Swiss-Prot;Acc:Q38882]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.