CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX88175	Canola	cytosol	91.41	96.22
CDY70643	Canola	cytosol, peroxisome	24.74	90.61
CDY05490	Canola	cytosol	89.49	85.64
CDY05351	Canola	cytosol	89.1	85.28
AT5G25370.2	Thale cress	cytosol	86.67	82.44
CDY20149	Canola	cytosol, nucleus, peroxisome	17.18	62.91
CDY21865	Canola	cytosol	63.08	60.59
VIT_04s0008g05450.t01	Wine grape	cytosol	60.13	60.44
CDY30108	Canola	cytosol	61.92	59.63
CDX97705	Canola	cytosol	61.54	59.26
CDY47540	Canola	cytosol	61.54	59.11
CDY60551	Canola	cytosol	61.15	58.74
PGSC0003DMT400020297	Potato	cytosol	61.67	58.73
KRH52443	Soybean	cytosol	62.05	58.6
Solyc12g011170.1.1	Tomato	cytosol	61.54	56.6
KRH52444	Soybean	cytosol, plastid	58.97	56.03
KRH61774	Soybean	cytosol	25.0	55.87
CDY20148	Canola	cytosol, peroxisome, plastid	26.28	51.38
CDY41006	Canola	mitochondrion	10.26	51.28
CDY28756	Canola	cytosol, extracellular	8.21	50.79
CDY13283	Canola	mitochondrion	22.18	49.01
CDX87920	Canola	cytosol	21.28	48.4
CDY63527	Canola	cytosol	20.64	48.2
CDY51545	Canola	cytosol	8.46	46.15
CDX90807	Canola	cytosol	42.95	41.51
CDY64184	Canola	mitochondrion	43.21	41.35
CDY33065	Canola	cytosol	40.0	41.16
CDX72557	Canola	cytosol	45.51	41.04
CDY24051	Canola	cytosol	39.87	41.03
CDX86742	Canola	cytosol	44.23	40.73
CDY47037	Canola	cytosol	45.38	40.0
CDY67335	Canola	cytosol	44.36	39.95
CDX90808	Canola	cytosol	40.51	39.8
CDX80734	Canola	cytosol	6.15	39.67
CDY35793	Canola	cytosol	43.97	39.65
CDY41630	Canola	cytosol	43.72	39.33
CDX90066	Canola	cytosol	45.26	36.24
CDY52961	Canola	cytosol, nucleus, peroxisome	45.77	35.99
CDY54926	Canola	cytosol, nucleus, peroxisome	45.77	35.59
CDY15144	Canola	peroxisome	45.26	33.18
CDY46254	Canola	cytosol	4.1	32.99
CDY13284	Canola	cytosol	18.85	32.03
CDY42882	Canola	nucleus	12.69	30.75
CDX92096	Canola	nucleus	25.77	18.58
CDY18811	Canola	cytosol, nucleus, peroxisome	24.87	18.53
CDX95904	Canola	cytosol, nucleus, peroxisome	25.51	18.29
CDY51604	Canola	cytosol	2.69	7.45

Protein Annotations

KEGG:00564+3.1.4.4	KEGG:00565+3.1.4.4	Gene3D:3.30.870.10	MapMan:5.7.2.4.1	GO:A0A078CUJ4	InterPro:C2_dom
EnsemblPlants:CDX80505	ProteinID:CDX80505	ProteinID:CDX80505.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004630
GO:GO:0005488	GO:GO:0005509	GO:GO:0005575	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016020	GO:GO:0016787	GO:GO:0046470	GO:GO:0070290	EnsemblPlantsGene:GSBRNA2T00133607001
InterPro:IPR000008	InterPro:IPR001736	PFAM:PF00168	PFAM:PF00614	PFAM:PF12357	PFAM:PF13091
PIRSF:PIRSF036470	InterPro:PLD-like_dom	InterPro:PLipase_D/transphosphatidylase	InterPro:PLipase_D_C	InterPro:PLipase_D_fam	InterPro:PLipase_D_pln
PFscan:PS50035	PANTHER:PTHR18896	PANTHER:PTHR18896:SF89	MetaCyc:PWY-3561	MetaCyc:PWY-7039	SMART:SM00155
SMART:SM00239	SUPFAM:SSF49562	SUPFAM:SSF56024	UniParc:UPI0004EDDCEE	SEG:seg	:

Description

BnaC07g29390D

Coordinates

chrLK031821:-:985534..988795

Molecular Weight (calculated)

88939.5 Da

IEP (calculated)

8.162

GRAVY (calculated)

-0.397

Length

780 amino acids

Sequence
(BLAST)

001: MAEQLLLHGT LEVKIYRIDK LHQRARFNLR GKGDKEPTAG KKIQTQIKRL AASCTDLLGG HLYATIDLDR SRVARTMMRR NTKWFQSFHV YAAHSISKII
101: FTIKDDEPIG ANLIGRAYLP ATEVISGQPV DRWLDVLDQN KRPIQGGVPN AFFNQREGCK VTLYQDAHVL AIYIHHRCWE DIFDAIWDAK HLIYITGWSV
201: YPDITLIRDP KRPRPGGNLK LGELLKKKAE ENVTVLMLVW DDRTSNKAFK RDGLMMTHDQ KTYDYFKNTK VRCVLCPRNP DNGESIVQGF GVAAMFTHHQ
301: KTIVVDAEVD GLKTRRRIVS FLGGIDLCDG RYDTEEHPLF GTLNNVHSND FHQPNFDGAS IKKGGPREPW HDIHCRLDGP AAWDVLYNFE QRWLKQGNGR
401: RYLVSMERFS EITVPPLPIV RPDDVEGWTV QVFRSIDNGA VEGFPEDPRE ASSVGLVTGK NNVIERSIQD AYINAIRRAK HFIYIENQYF LGSSFGWNSR
501: DVNLNEINAL HLIPKEISLK IVSKIEAGER FSVYVVIPLW PEGKPGSASV QAILDWQRRT MEMMYTDIII ALRKKGLDVN PRDYLTFFCL GNREVNKAGE
601: YSPPEKPEAN SDYATAQESR RFMIYVHSKM MIVDDEYVIL GSANINQRSM DGGRDSEIAM GAYQPNHLLA TNQMRPRGQV FSFRISLWLE HLRIVTNTFQ
701: FPESEKCIRM VNAKADELWG LYSAQVYPRD HDLPGHLLSY PISIGSNGEV TSLAGVELFP DTNAKVLGEK TNYLPPILTT

Best Arabidopsis Sequence Match ( AT5G25370.2 )
(BLAST)

001: MTEQLLLHGT LEVKIYRIDK LHQRSRFNLC GKGNKEPTGK KTQSQIKRLT DSCTSLFGGH LYATIDLDRS RVARTMMRRH PKWLQSFHVY TAHSISKIIF
101: TVKEDEPVSA SLIGRAYLPV TEVITGQPID RWLDILDENR RPIQGGSKLH VRVKFTHVTQ DVNWNKGIIL PSFNGVPNAY FNQREGCKVT LYQDAHVLNE
201: YPDVTLTGGQ VIYKHHRCWE EIFDAIWEAK HLIYIAGWSV NTDVTLVRDP KRTRPGGDLK LGELLKKKAE ENVTVLMLVW DDRTSHEVFK RDGLMMTHDQ
301: ETYDYFKNTK VRCVLCPRNP DNGDSIVQGF EVATMFTHHQ KTIVVDSEVD GSLTKRRIVS FLGGIDLCDG RYDTVEHPLF GTLNSVHAND FHQPNFDGAS
401: IKKGGPREPW HDIHCKLDGP AAWDVLYNFE QRWMKQGSGR RYLISMAQLA EITVPPLPIV QPDNEEGWTV QVFRSIDDGA VEGFPEDPRE AASIGLISGK
501: DNVIERSIQD AYVNAIRRAK NFIYIENQYF LGSSFGWNSR DINLNEINAL QLIPKEISLK IVSKIEAGER FSVYIVIPLW PEGKPGSASV QAILDWQRRT
601: MEMMYTDIII ALRKKGLDAN PRDYLTFFCL GNREKGKVGE YLPPEKPEAN SDYARAQESR RFMIYVHSKM MIVDDEYIII GSANINQRSM DGGRDTEIAM
701: GAYQPSHLLS TNNMRPVGQI FSFRISLWLE HLRVTTNAFQ CPESEECIRM VNATADELWG LYSAQEYPRN DDLPGHLLSY PISIGSNGEV TNLAGTEFFP
801: DTNAKVVGEK SNYLPPILTS

Arabidopsis Description

PLDALPHA3Phospholipase D alpha 3 [Source:UniProtKB/Swiss-Prot;Acc:P58766]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.