CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY70643	Canola	cytosol, peroxisome	26.32	91.55
CDX80505	Canola	cytosol	96.22	91.41
CDY05490	Canola	cytosol	90.42	82.21
CDY05351	Canola	cytosol	90.01	81.84
AT5G25370.2	Thale cress	cytosol	87.04	78.66
Bra009836.1-P	Field mustard	cytosol	97.44	77.47
CDY20149	Canola	cytosol, nucleus, peroxisome	18.49	64.32
VIT_04s0008g05450.t01	Wine grape	cytosol	63.7	60.82
CDY21865	Canola	cytosol	63.56	58.0
CDY30108	Canola	cytosol	62.62	57.28
CDX97705	Canola	cytosol	62.35	57.04
PGSC0003DMT400020297	Potato	cytosol	63.02	57.02
CDY47540	Canola	cytosol	62.35	56.9
CDY60551	Canola	cytosol	62.08	56.65
KRH52443	Soybean	cytosol	62.35	55.93
Solyc12g011170.1.1	Tomato	cytosol	62.89	54.95
KRH52444	Soybean	cytosol, plastid	59.78	53.96
CDY41006	Canola	mitochondrion	10.8	51.28
CDY28756	Canola	cytosol, extracellular	8.64	50.79
KRH61774	Soybean	cytosol	23.62	50.14
CDY13283	Canola	mitochondrion	23.62	49.58
CDY20148	Canola	cytosol, peroxisome, plastid	25.91	48.12
CDY51545	Canola	cytosol	9.04	46.85
CDX87920	Canola	cytosol	19.97	43.15
CDY63527	Canola	cytosol	19.3	42.81
CDY33065	Canola	cytosol	41.43	40.5
CDY24051	Canola	cytosol	41.3	40.37
CDX90807	Canola	cytosol	43.72	40.15
CDY64184	Canola	mitochondrion	43.99	40.0
CDX72557	Canola	cytosol	46.42	39.77
CDX86742	Canola	cytosol	45.21	39.55
CDY47037	Canola	cytosol	46.42	38.87
CDX80734	Canola	cytosol	6.34	38.84
CDX90808	Canola	cytosol	41.43	38.66
CDY67335	Canola	cytosol	44.8	38.34
CDY35793	Canola	cytosol	44.67	38.27
CDY41630	Canola	cytosol	44.26	37.83
CDX90066	Canola	cytosol	45.75	34.8
CDY52961	Canola	cytosol, nucleus, peroxisome	45.75	34.17
CDY46254	Canola	cytosol	4.45	34.02
CDY54926	Canola	cytosol, nucleus, peroxisome	45.75	33.8
CDY15144	Canola	peroxisome	45.75	31.86
CDY42882	Canola	nucleus	13.09	30.12
CDY13284	Canola	cytosol	18.35	29.63
CDY18811	Canola	cytosol, nucleus, peroxisome	25.51	18.05
CDX92096	Canola	nucleus	26.05	17.84
CDX95904	Canola	cytosol, nucleus, peroxisome	25.78	17.56
CDY51604	Canola	cytosol	2.16	5.67

Protein Annotations

KEGG:00564+3.1.4.4	KEGG:00565+3.1.4.4	Gene3D:3.30.870.10	MapMan:5.7.2.4.1	GO:A0A078DG57	InterPro:C2_dom
EnsemblPlants:CDX88175	ProteinID:CDX88175	ProteinID:CDX88175.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004630
GO:GO:0005488	GO:GO:0005509	GO:GO:0005575	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016020	GO:GO:0016787	GO:GO:0046470	GO:GO:0070290	EnsemblPlantsGene:GSBRNA2T00147632001
InterPro:IPR000008	InterPro:IPR001736	PFAM:PF00168	PFAM:PF00614	PFAM:PF12357	PIRSF:PIRSF036470
InterPro:PLipase_D/transphosphatidylase	InterPro:PLipase_D_C	InterPro:PLipase_D_fam	InterPro:PLipase_D_pln	PFscan:PS50035	PANTHER:PTHR18896
PANTHER:PTHR18896:SF89	MetaCyc:PWY-3561	MetaCyc:PWY-7039	SMART:SM00155	SUPFAM:SSF49562	SUPFAM:SSF56024
UniParc:UPI0004EF18AD	SEG:seg	:	:	:	:

Description

BnaA06g27660D

Coordinates

chrLK031854:-:1120271..1131730

Molecular Weight (calculated)

84696.1 Da

IEP (calculated)

6.959

GRAVY (calculated)

-0.384

Length

741 amino acids

Sequence
(BLAST)

001: MHTFKYENFP LGDKEPTTGK KIQTQIKRLA ASCTDLLGGH LYATIDLDRS RVARTMMRRH TKWFQSFHIY AAHSISKIIF TIKEDEPIGA NLIGRAYLPA
101: TEVISGQPVD RWLDVLDQNK RPIQGGVPNA FFNQREGCKV TLYQDAHVLA IYIHHRCWED IFDAIWDAKH LIYITGWSVY PDITLIRDPK RPRPGGNLKL
201: GELLKKKAEE NVTVLMLVWD DRTSNEAFKR DGLMMTHDQE TYDYFKNTKV RCVLCPRFGV AAMFTHHQKT IVVDAERRIV SFLGGIDLCD GRYDTEEHPL
301: FGTLNNVHSN DFHQPNFDGA SIKKGGPREP WHDIHCRLDG PAAWDVLYNF EQRWMKQGNG RRYLVSMERF SEITVPPLPI VQPDDVEGWT VQVFRSIDNG
401: AVEGFPEDPR EASSVGLVTG KNNVIERSIQ DAYINAIRRA KHFIYIESQY FLGSSFGWNS RDINLNEINA LHLIPKEISL KIVSKIEAGE RFSVYIVIPL
501: WPEGKPGSAS VQAILDWQRR TMEMMYTDII IALRKKGLDA NPRDYLTFFC LGNREVNKAG EYSPPEKPDA NSDYARAQES RRFMIYVHSK MMIVDDEYVI
601: IGSANINQRS MDGGRDSEIA MGAYQPNHLL ATNQLRPRGQ VFSFRISLWL EHLRIVTNTF QFPESEECIR MVNAKADELW GLYSAQVYPR DHDLPGHLLS
701: YPISIGSNGE VTSLAGAEFF PDTNAKVLGE KTNFLPPILT T

Best Arabidopsis Sequence Match ( AT5G25370.2 )
(BLAST)

001: MTEQLLLHGT LEVKIYRIDK LHQRSRFNLC GKGNKEPTGK KTQSQIKRLT DSCTSLFGGH LYATIDLDRS RVARTMMRRH PKWLQSFHVY TAHSISKIIF
101: TVKEDEPVSA SLIGRAYLPV TEVITGQPID RWLDILDENR RPIQGGSKLH VRVKFTHVTQ DVNWNKGIIL PSFNGVPNAY FNQREGCKVT LYQDAHVLNE
201: YPDVTLTGGQ VIYKHHRCWE EIFDAIWEAK HLIYIAGWSV NTDVTLVRDP KRTRPGGDLK LGELLKKKAE ENVTVLMLVW DDRTSHEVFK RDGLMMTHDQ
301: ETYDYFKNTK VRCVLCPRNP DNGDSIVQGF EVATMFTHHQ KTIVVDSEVD GSLTKRRIVS FLGGIDLCDG RYDTVEHPLF GTLNSVHAND FHQPNFDGAS
401: IKKGGPREPW HDIHCKLDGP AAWDVLYNFE QRWMKQGSGR RYLISMAQLA EITVPPLPIV QPDNEEGWTV QVFRSIDDGA VEGFPEDPRE AASIGLISGK
501: DNVIERSIQD AYVNAIRRAK NFIYIENQYF LGSSFGWNSR DINLNEINAL QLIPKEISLK IVSKIEAGER FSVYIVIPLW PEGKPGSASV QAILDWQRRT
601: MEMMYTDIII ALRKKGLDAN PRDYLTFFCL GNREKGKVGE YLPPEKPEAN SDYARAQESR RFMIYVHSKM MIVDDEYIII GSANINQRSM DGGRDTEIAM
701: GAYQPSHLLS TNNMRPVGQI FSFRISLWLE HLRVTTNAFQ CPESEECIRM VNATADELWG LYSAQEYPRN DDLPGHLLSY PISIGSNGEV TNLAGTEFFP
801: DTNAKVVGEK SNYLPPILTS

Arabidopsis Description

PLDALPHA3Phospholipase D alpha 3 [Source:UniProtKB/Swiss-Prot;Acc:P58766]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.