Factsheet for Solyc12g011170.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
extracellular 1
cytosol 3
endoplasmic reticulum 1
vacuole 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400020297	Potato	cytosol	94.22	97.56
Solyc08g045740.1.1	Tomato	cytosol	22.41	69.6
CDY70643	Canola	cytosol, peroxisome	16.16	64.32
Solyc06g068090.2.1	Tomato	plastid	60.97	63.91
CDX88175	Canola	cytosol	54.95	62.89
VIT_04s0008g05450.t01	Wine grape	cytosol	57.55	62.89
Solyc08g066800.2.1	Tomato	plastid	59.79	62.83
KRH52443	Soybean	cytosol	60.02	61.62
CDY05490	Canola	cytosol	59.2	61.6
CDX80505	Canola	cytosol	56.6	61.54
CDY05351	Canola	cytosol	58.84	61.23
Bra020497.1-P	Field mustard	cytosol	59.32	61.19
Solyc03g116620.2.1	Tomato	plastid	58.49	61.16
Solyc08g066790.2.1	Tomato	plastid	58.02	60.97
AT5G25370.2	Thale cress	cytosol	58.14	60.12
KRH52444	Soybean	cytosol, plastid	57.67	59.56
KRH61774	Soybean	cytosol	22.64	55.01
Solyc01g103900.2.1	Tomato	cytosol	10.5	53.94
Bra009836.1-P	Field mustard	cytosol	56.37	51.29
Solyc04g082000.2.1	Tomato	cytosol	43.04	43.5
Solyc02g061850.2.1	Tomato	cytosol	42.1	42.0
Solyc10g024370.1.1	Tomato	cytosol	40.92	41.36
Solyc08g080130.2.1	Tomato	nucleus	41.04	41.13
Solyc02g083340.2.1	Tomato	nucleus	41.98	41.11
Solyc01g103910.1.1	Tomato	cytosol	33.02	40.17
Solyc01g091910.2.1	Tomato	plastid	41.63	39.44
Solyc04g051140.1.1	Tomato	cytosol	8.61	36.32
Solyc10g017650.1.1	Tomato	cytosol	42.45	32.17
Solyc01g100020.2.1	Tomato	cytosol, nucleus, peroxisome	23.11	18.63
Solyc01g065720.2.1	Tomato	cytosol	23.47	17.99

Protein Annotations

KEGG:00564+3.1.4.4	KEGG:00565+3.1.4.4	Gene3D:2.60.40.150	Gene3D:3.30.870.10	MapMan:5.7.2.4.1	InterPro:C2_dom
InterPro:C2_domain_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0004630	GO:GO:0005488	GO:GO:0005509
GO:GO:0005575	GO:GO:0006629	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009414	GO:GO:0009628	GO:GO:0009651	GO:GO:0009719	GO:GO:0009737	GO:GO:0009987
GO:GO:0016020	GO:GO:0016042	GO:GO:0016787	GO:GO:0046466	GO:GO:0046470	GO:GO:0070290
InterPro:IPR000008	InterPro:IPR001736	InterPro:IPR035892	UniProt:K4DCK3	PFAM:PF00168	PFAM:PF00614
PFAM:PF12357	PIRSF:PIRSF036470	InterPro:PLipase_D/transphosphatidylase	InterPro:PLipase_D_C	InterPro:PLipase_D_fam	InterPro:PLipase_D_pln
PFscan:PS50035	PANTHER:PTHR18896	PANTHER:PTHR18896:SF109	SMART:SM00155	SMART:SM00239	SUPFAM:SSF49562
SUPFAM:SSF56024	EnsemblPlantsGene:Solyc12g011170.1	EnsemblPlants:Solyc12g011170.1.1	UniParc:UPI000276A18E	SEG:seg	:

Description

Phospholipase D [Source:UniProtKB/TrEMBL;Acc:K4DCK3]

Coordinates

chr12:+:4013435..4018305

Molecular Weight (calculated)

96692.4 Da

IEP (calculated)

7.025

GRAVY (calculated)

-0.388

Length

848 amino acids

Sequence
(BLAST)

001: MLLNSTNGLS IKYNTNSHLL KDKNYLFEMV PRLLHGTLHA TIYEIDKIRT GCADCCGPTS PQKLTKRVLN NVKKLFFCAP KISATKLYAT IDLDKARVGR
101: TRIAENEPSN PHWNDTFRLY CAHEVSNIIF TVKDENPVSA TLIGRAYLPV EEVLNRYIVD RWVPIVDEER HPISGHSKIH VRLQFYSVKQ DSNWSRGITS
201: LAFGGLPYTF FKERQGCQVT LYPDADISDD DITNYLKSQG LFEPQRCWED IFDAISNAKH MIYIAGWSVY TKITLIRNPR RPKVGGELTL GELLKKKASE
301: GVNVLLLVWD DITSDEVLKR DGLMSTHDQE TADYFKNTDV HCCLCPRNAD SGKTVIQGFQ VGTMFTHHQK TIVVDTEIPG GMSHKRMIVS FLGGIDLCDG
401: RYDTRDHSLF RTLDTVHKQD FYQPAFPGSS IAKGGPREPW HDIHCRLEGP VAWDVLYNFE QRWRKQIGNR FIYSINELDK FIIRPTEVTA SRDRETWNVQ
501: IFRSIDGGAV TDFPVKPDEA SEVGLVTGKN NVIDQSIHDA YISAIRRAKN FIYIENQYFI GSCYGWKPTT DIKLEDIGAL HLIPKEISLK IVSKIQAGER
601: FTVYVVLPMW PEGIPESDSV QAILDWQKRT MEMMYTDICN ALKAKGNTNA DPREYLTFFC LGNREVEKPG EYKPPQKPVP DTNYARAQEF RRFMIYVHSK
701: MMIVDDEYII IGSANINQRS MDGARDSEIA MGGYQPYHLA SNQPPRGKIY GFRMSLWCEH LNYADDSFAD PSSLECVRKV NGMADESWKL YSNDTFDIDL
801: PGHLLRYPID INSNTGQITT LPGFKFFPDT KAAILGNKSQ FLPPILTT

Best Arabidopsis Sequence Match ( AT3G15730.1 )
(BLAST)

001: MAQHLLHGTL HATIYEVDAL HGGGVRQGFL GKILANVEET IGVGKGETQL YATIDLQKAR VGRTRKIKNE PKNPKWYESF HIYCAHLASD IIFTVKDDNP
101: IGATLIGRAY IPVDQVINGE EVDQWVEILD NDRNPIQGGS KIHVKLQYFH VEEDRNWNMG IKSAKFPGVP YTFFSQRQGC KVSLYQDAHI PDNFVPRIPL
201: AGGKNYEPQR CWEDIFDAIS NAKHLIYITG WSVYAEIALV RDSRRPKPGG DVTIGELLKK KASEGVRVLL LVWDDRTSVD VLKKDGLMAT HDEETENFFR
301: GSDVHCILCP RNPDDGGSIV QSLQISTMFT HHQKIVVVDS EMPSRGGSEM RRIVSFVGGI DLCDGRYDTP FHSLFRTLDT VHHDDFHQPN FTGAAITKGG
401: PREPWHDIHS RLEGPIAWDV MYNFEQRWSK QGGKDILVKL RDLSDIIITP SPVMFQEDHD VWNVQLFRSI DGGAAAGFPE SPEAAAEAGL VSGKDNIIDR
501: SIQDAYIHAI RRAKDFIYVE NQYFLGSSFA WAADGITPED INALHLIPKE LSLKIVSKIE KGEKFRVYVV VPMWPEGLPE SGSVQAILDW QRRTMEMMYK
601: DVIQALRAQG LEEDPRNYLT FFCLGNREVK KDGEYEPAEK PDPDTDYMRA QEARRFMIYV HTKMMIVDDE YIIIGSANIN QRSMDGARDS EIAMGGYQPH
701: HLSHRQPARG QIHGFRMSLW YEHLGMLDET FLDPSSLECI EKVNRISDKY WDFYSSESLE HDLPGHLLRY PIGVASEGDI TELPGFEFFP DTKARILGTK
801: SDYLPPILTT

Arabidopsis Description

PLDALPHA1Phospholipase D alpha 1 [Source:UniProtKB/Swiss-Prot;Acc:Q38882]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.