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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • vacuole 1
  • cytosol 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, vacuole
BaCelLo:nucleus
EpiLoc:vacuole
MultiLoc:cytosol
Plant-mPloc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc12g011170.1.1 Tomato cytosol 69.6 22.41
TraesCS4A01G338500.1 Wheat cytosol 10.26 21.88
Solyc08g066790.2.1 Tomato plastid 56.04 18.96
Solyc08g066800.2.1 Tomato plastid 55.68 18.84
Solyc06g068090.2.1 Tomato plastid 55.68 18.79
Solyc03g116620.2.1 Tomato plastid 52.75 17.76
Solyc01g103910.1.1 Tomato cytosol 44.32 17.36
Zm00001d023573_P002 Maize plastid 20.15 15.19
Solyc04g082000.2.1 Tomato cytosol 43.96 14.3
Solyc02g061850.2.1 Tomato cytosol 44.32 14.24
Solyc10g024370.1.1 Tomato cytosol 43.59 14.18
Solyc02g083340.2.1 Tomato nucleus 44.69 14.09
Solyc08g080130.2.1 Tomato nucleus 43.59 14.07
Solyc01g091910.2.1 Tomato plastid 42.49 12.96
Solyc10g017650.1.1 Tomato cytosol 44.32 10.81
Solyc04g051140.1.1 Tomato cytosol 4.76 6.47
Solyc01g065720.2.1 Tomato cytosol 22.34 5.52
Solyc01g100020.2.1 Tomato cytosol, nucleus, peroxisome 21.25 5.51
Solyc01g103900.2.1 Tomato cytosol 1.1 1.82
Protein Annotations
EnsemblPlants:Solyc08g045740.1.1EnsemblPlantsGene:Solyc08g045740.1InterPro:PLipase_D_famKEGG:00564+3.1.4.4KEGG:00565+3.1.4.4PANTHER:PTHR18896
PANTHER:PTHR18896:SF109SUPFAM:SSF56024UniParc:UPI000276C649UniProt:K4CKC9MapMan:35.1:
Description
No Description!
Coordinates
chr8:+:17002830..17003910
Molecular Weight (calculated)
31661.1 Da
IEP (calculated)
5.535
GRAVY (calculated)
-0.107
Length
273 amino acids
Sequence
(BLAST)
001: MKASEGVNVL LLVWDDITSD EVLKRDGIMS THDQETKNYV NNTYVHYCLC PRNADSEKTV IQEFQVGVMF THHQMTIVVD TEIPGGMTLE TIHRQDFYQH
101: IFQDTSIAKG GPREPWHHIH CRLVTTSRER ETWNVQIFRF IDGGVVTNFP VNPEEAYDVG LFTGIENVID HSIPDAYISA IRRAKIFIYI ANQYFIESYI
201: VGLEISLKIL SKIQPEERFA VYIVIPMWPK GILKSDYVHV SLDLQKWKVE IMYTDTCNFL RSREILLLVL EST
Best Arabidopsis Sequence Match ( AT1G52570.1 )
(BLAST)
001: MEECLLHGRL HATIYEVDHL HAEGGRSGFL GSILANVEET IGVGKGETQL YATIDLEKAR VGRTRKITKE PKNPKWFESF HIYCGHMAKH VIFTVKDANP
101: IGATLIGRGY IPVEDILHGE EVDRWVDILD NEKNPIAGGS KIHVKLQYFG VEKDKNWNRG IKSAKFPGVP YTFFSQRRGC KVSLYQDAHI PGNFVPKIPL
201: AGGKNYEPHR CWEDIFDAIT NAKHLIYITG WSVYTEISLV RDSRRPKQGG DVTVGELLKK KASEGVKVIL LVWDDRTSVD LLKKDGLMAT HDEETENFFR
301: GTDVNCILCP RNPDDGGSIV QNLQISTMFT HHQKIVVVDS EMPSGGSRSR RIVSFVGGLD LCDGRYDTPF HSLFRTLDTA HHDDFHQPNF TGAAITKGGP
401: REPWHDIHCR LEGPIAWDVL YNFEQRWSRQ GGKDILVKMR ELGDIIIPPS PVLFSEDHDV WNVQLFRSID GGAAAGFPDS PEAAAEAGLV SGKDNIIDRS
501: IQDAYIHAIR RAKDFIYIEN QYFLGSSFAW SADGIKPEEI NALHLIPKEL SLKIVSKIKA GEKFKVYVVV PMWPEGIPES GSVQAILDWQ KRTMEMMYKD
601: VIKALRENGL EGEDPRDYLT FFCLGNREVK KDGEYEPSEK PEPDTDYIRA QEARRFMIYV HTKMMIVDDE YIIIGSANIN QRSMDGARDS EIAMGGYQPY
701: HLSTRQPARG QIHGFRMSLW YEHLGMLDET FLDPSSQECI QKVNRVADKY WDLYSSESLE HDLPGHLLRY PIGIASEGNI TELPGCEFFP DTKARILGVK
801: SDYMPPILTT
Arabidopsis Description
PLDALPHA2Phospholipase D alpha 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SSQ9]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.