Factsheet for Solyc08g066790.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
extracellular 1
cytosol 2
endoplasmic reticulum 1
vacuole 1
mitochondrion 1
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

plastid: 22908117

msms PMID: 22908117 doi

C Barsan, M Zouine, E Maza, W Bian, I Egea, M Rossignol, D Bouyssie, C Pichereaux, E Purgatto, M Bouzayen, A Latché, JC Pech

Université de Toulouse, Institut National Polytechnique-Ecole Nationale Supérieure Agronomique de Toulouse, Génomique et Biotechnologie des Fruits, Castanet-Tolosan F-31326, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400024828	Potato	cytosol	14.87	94.49
Solyc08g066800.2.1	Tomato	plastid	88.6	88.6
GSMUA_Achr7P10170_001	Banana	cytosol	50.56	75.56
TraesCS3D01G130900.1	Wheat	golgi	75.09	74.63
KXG31749	Sorghum	cytosol	74.97	74.51
TraesCS3B01G149100.1	Wheat	unclear	74.97	74.51
TraesCS3A01G130000.1	Wheat	plastid	74.85	74.38
HORVU3Hr1G024530.2	Barley	plastid	74.72	74.26
Zm00001d039670_P004	Maize	cytosol	74.47	74.01
Solyc06g068090.2.1	Tomato	plastid	73.98	73.79
Zm00001d008727_P002	Maize	cytosol	74.23	73.77
Os01t0172400-03	Rice	plastid	73.48	73.03
EES17463	Sorghum	cytosol	73.23	72.69
Solyc03g116620.2.1	Tomato	plastid	71.25	70.9
TraesCS1D01G116700.1	Wheat	cytosol	68.28	67.61
TraesCS1A01G115300.1	Wheat	cytosol	68.15	67.48
OQU77524	Sorghum	plastid	68.53	67.36
Os05t0171000-01	Rice	plasma membrane	68.65	67.23
TraesCS1B01G135200.1	Wheat	cytosol	66.79	65.89
HORVU1Hr1G025370.1	Barley	cytosol	68.77	64.91
Zm00001d037643_P001	Maize	cytosol	68.03	60.6
GSMUA_Achr10P...	Banana	cytosol, plastid	34.08	60.18
Solyc12g011170.1.1	Tomato	cytosol	60.97	58.02
Solyc08g045740.1.1	Tomato	cytosol	18.96	56.04
Solyc01g103900.2.1	Tomato	cytosol	10.66	52.12
Solyc04g082000.2.1	Tomato	cytosol	46.59	44.82
Solyc10g024370.1.1	Tomato	cytosol	45.6	43.86
Solyc08g080130.2.1	Tomato	nucleus	45.11	43.03
Solyc01g103910.1.1	Tomato	cytosol	36.18	41.89
Solyc02g061850.2.1	Tomato	cytosol	43.99	41.76
Solyc02g083340.2.1	Tomato	nucleus	43.74	40.76
Solyc01g091910.2.1	Tomato	plastid	44.36	40.0
Solyc04g051140.1.1	Tomato	cytosol	9.17	36.82
Solyc10g017650.1.1	Tomato	cytosol	44.49	32.08
Solyc01g100020.2.1	Tomato	cytosol, nucleus, peroxisome	24.78	19.01
Solyc01g065720.2.1	Tomato	cytosol	25.15	18.35

Protein Annotations

KEGG:00564+3.1.4.4	KEGG:00565+3.1.4.4	Gene3D:2.60.40.150	Gene3D:3.30.870.10	MapMan:5.7.2.4.1	InterPro:C2_dom
InterPro:C2_domain_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0004630	GO:GO:0005488	GO:GO:0005509
GO:GO:0005575	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987
GO:GO:0016020	GO:GO:0016042	GO:GO:0016787	GO:GO:0046470	GO:GO:0070290	InterPro:IPR000008
InterPro:IPR001736	InterPro:IPR035892	UniProt:K4CLQ5	PFAM:PF00168	PFAM:PF00614	PFAM:PF12357
PIRSF:PIRSF036470	InterPro:PLipase_D/transphosphatidylase	InterPro:PLipase_D_C	InterPro:PLipase_D_fam	InterPro:PLipase_D_pln	PFscan:PS50035
PANTHER:PTHR18896	PANTHER:PTHR18896:SF109	SMART:SM00155	SMART:SM00239	SUPFAM:SSF49562	SUPFAM:SSF56024
EnsemblPlantsGene:Solyc08g066790.2	EnsemblPlants:Solyc08g066790.2.1	UniParc:UPI000276BEAD	SEG:seg	:	:

Description

Phospholipase D [Source:UniProtKB/TrEMBL;Acc:K4CLQ5]

Coordinates

chr8:+:55639870..55643539

Molecular Weight (calculated)

92756.0 Da

IEP (calculated)

6.676

GRAVY (calculated)

-0.368

Length

807 amino acids

Sequence
(BLAST)

001: MAQFLLHGTL HVTIFEVDRL HTNFGRDFFN KVVQGIEGAI GFNKAASRLY ATIDLGKARV GRTRLLDDHK NPRWYESFHI YCAHMAANVI ITVKFDNPIG
101: AEVIGRAYFP VQQLLDGEEV DEWLEILNTE RKPLHGHSKI HVKLQYFDVT REYNWNRGIK VTRFPGVPYT FFRQRQGCRV TLYQDCHVPD NFIPKIPLSD
201: GKFYKPQRCW EDIFDAVTNA KHLIYITGWS IYTEVTLIRD RRRPKPGGDI SLGELLKRKA NEGVRVLMLV WDDRTSIPVL QQDGLMATHD EETANYFRGT
301: QVSCVLCPRN PDDGRSIIQN IEIGTMFTHH QKIVIVDGEM PNGDRERRRI VSYIGGLDLC DGRYDTQFHS LFRTLDTAHH DDFHQPNFTG TSIHKGGPRE
401: PWHDIHCRIE GPAAWDVLYN FEQRWRKQGV RDLLIDLRDI DNIIIPPSPV MYPDDHDTWN VQVFRSIDGG AAFGFPSAPE EAAKSGLISG KENIIDRSIQ
501: DAYINAIRRA KHFIYIENQY FLGSCFSWYS NDIKDEAINS LQLIPKELSL KIVSKIEAGE RFTVYVVVPM WPEGLPESAS VQAILDWQRR TMQMMYTDII
601: QALKVKGIVA NPKEYLSFFC LGNRETKKRG EYEPCETPEP NSGYHKAQEA RRFMIYVHSK MMIVDDEYII IGSANINQRS MDGARDSEIA MGAYQPFHLC
701: VKEPARGQVH GFRMALWYEH LGMLDDRFLQ PESVECIRKV NKIGDKYWDM YSSERLIHDL PGHLLTYPIG ITENGEITEL PGVGCFPDTM APVLGTISNF
801: LPPILTT

Best Arabidopsis Sequence Match ( AT3G15730.1 )
(BLAST)

001: MAQHLLHGTL HATIYEVDAL HGGGVRQGFL GKILANVEET IGVGKGETQL YATIDLQKAR VGRTRKIKNE PKNPKWYESF HIYCAHLASD IIFTVKDDNP
101: IGATLIGRAY IPVDQVINGE EVDQWVEILD NDRNPIQGGS KIHVKLQYFH VEEDRNWNMG IKSAKFPGVP YTFFSQRQGC KVSLYQDAHI PDNFVPRIPL
201: AGGKNYEPQR CWEDIFDAIS NAKHLIYITG WSVYAEIALV RDSRRPKPGG DVTIGELLKK KASEGVRVLL LVWDDRTSVD VLKKDGLMAT HDEETENFFR
301: GSDVHCILCP RNPDDGGSIV QSLQISTMFT HHQKIVVVDS EMPSRGGSEM RRIVSFVGGI DLCDGRYDTP FHSLFRTLDT VHHDDFHQPN FTGAAITKGG
401: PREPWHDIHS RLEGPIAWDV MYNFEQRWSK QGGKDILVKL RDLSDIIITP SPVMFQEDHD VWNVQLFRSI DGGAAAGFPE SPEAAAEAGL VSGKDNIIDR
501: SIQDAYIHAI RRAKDFIYVE NQYFLGSSFA WAADGITPED INALHLIPKE LSLKIVSKIE KGEKFRVYVV VPMWPEGLPE SGSVQAILDW QRRTMEMMYK
601: DVIQALRAQG LEEDPRNYLT FFCLGNREVK KDGEYEPAEK PDPDTDYMRA QEARRFMIYV HTKMMIVDDE YIIIGSANIN QRSMDGARDS EIAMGGYQPH
701: HLSHRQPARG QIHGFRMSLW YEHLGMLDET FLDPSSLECI EKVNRISDKY WDFYSSESLE HDLPGHLLRY PIGVASEGDI TELPGFEFFP DTKARILGTK
801: SDYLPPILTT

Arabidopsis Description

PLDALPHA1Phospholipase D alpha 1 [Source:UniProtKB/Swiss-Prot;Acc:Q38882]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.