Factsheet for Solyc01g103910.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
vacuole 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400011523	Potato	cytosol	95.41	77.69
Solyc10g024370.1.1	Tomato	cytosol	72.6	60.31
VIT_12s0035g00200.t01	Wine grape	cytosol, nucleus, peroxisome	49.07	54.11
KRH59149	Soybean	cytosol	64.85	52.74
KRH43039	Soybean	cytosol	64.56	52.51
GSMUA_Achr7P23470_001	Banana	cytosol	58.68	51.97
Solyc04g082000.2.1	Tomato	cytosol	60.11	49.94
Os07t0260400-01	Rice	cytosol, plasma membrane	59.68	49.64
EER98315	Sorghum	cytosol	59.54	49.46
HORVU5Hr1G060030.2	Barley	cytosol	58.68	48.75
TraesCS5A01G202000.1	Wheat	cytosol	58.68	48.75
TraesCS5D01G208300.2	Wheat	cytosol	58.68	48.4
TraesCS5B01G200600.1	Wheat	cytosol	58.68	48.4
TraesCS5D01G524600.1	Wheat	cytosol	56.67	47.02
Solyc02g083340.2.1	Tomato	nucleus	57.68	46.42
TraesCS5B01G525600.1	Wheat	cytosol	56.38	46.34
Solyc04g051140.1.1	Tomato	cytosol	13.34	46.27
Solyc02g061850.2.1	Tomato	cytosol	55.81	45.76
Zm00001d005484_P003	Maize	cytosol	56.81	45.57
Solyc08g045740.1.1	Tomato	cytosol	17.36	44.32
Solyc08g080130.2.1	Tomato	nucleus	53.52	44.09
Solyc01g091910.2.1	Tomato	plastid	53.95	42.01
TraesCS4A01G347800.3	Wheat	cytosol, nucleus, peroxisome	36.15	38.95
Solyc03g116620.2.1	Tomato	plastid	42.47	36.5
Solyc08g066790.2.1	Tomato	plastid	41.89	36.18
Solyc08g066800.2.1	Tomato	plastid	41.46	35.81
Solyc06g068090.2.1	Tomato	plastid	40.89	35.23
Solyc10g017650.1.1	Tomato	cytosol	53.37	33.24
Solyc12g011170.1.1	Tomato	cytosol	40.17	33.02
Solyc01g100020.2.1	Tomato	cytosol, nucleus, peroxisome	21.52	14.26
Solyc01g065720.2.1	Tomato	cytosol	21.95	13.83
Solyc01g103900.2.1	Tomato	cytosol	1.87	7.88

Protein Annotations

KEGG:00564+3.1.4.4	KEGG:00565+3.1.4.4	Gene3D:2.60.40.150	Gene3D:3.30.870.10	MapMan:50.3.1	InterPro:C2_dom
InterPro:C2_domain_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0004630	GO:GO:0005488	GO:GO:0005509
GO:GO:0005575	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987
GO:GO:0016020	GO:GO:0016042	GO:GO:0016787	GO:GO:0046470	GO:GO:0070290	InterPro:IPR000008
InterPro:IPR001736	InterPro:IPR035892	UniProt:K4B1W6	PFAM:PF00168	PFAM:PF00614	PIRSF:PIRSF036470
InterPro:PLipase_D/transphosphatidylase	InterPro:PLipase_D_fam	InterPro:PLipase_D_pln	PFscan:PS50004	PFscan:PS50035	PANTHER:PTHR18896
PANTHER:PTHR18896:SF60	SMART:SM00239	SUPFAM:SSF49562	SUPFAM:SSF56024	EnsemblPlantsGene:Solyc01g103910.1	EnsemblPlants:Solyc01g103910.1.1
UniParc:UPI00027685F5	SEG:seg	:	:	:	:

Description

Phospholipase D [Source:UniProtKB/TrEMBL;Acc:K4B1W6]

Coordinates

chr1:-:92400191..92404014

Molecular Weight (calculated)

77543.3 Da

IEP (calculated)

6.507

GRAVY (calculated)

-0.313

Length

697 amino acids

Sequence
(BLAST)

001: MPLRSSENVQ DLTGNAVLLH GELDLCIIEA CSLPNLDAKC LPMFSWKSKD STNASGLVDT SDPYVSVCLA GASIARTAVI PNNENPTWNE RLCIPVAHAV
101: DKVEFIVKDN DKVGAELIGI VAIPSTKIAE GKQINGWFPI CGSSGAPLET DAQLHLSIHY TPATENPLYK NGVGTEAEQK GVPHTYFPLR KGGDVTLYQD
201: AHAPDETLPE ILLDNGKVFK HNKCWEDICH AMLEAQHLIY IVGWSVYHLV RIIREPTRPV PSSGWLELGE MLKYKSQEGV RVILLIWDDK TSNDDLFLKT
301: EGVMQTHDEE TKKFFKHSSV NCILCPRSAS SKLSIFKQQV VGNIFTHHQK CVIVDTQAAG NTRKITAFVG GLDLCDGRYD TPEHRLFSDL DTVFENDIHN
401: PTFTSSSGGP REPWHDLHSK IEGPAAYDVL TNFEQRYRKA IKWIRIKKCK PGLDSLLKLD RIPSIHMPAA GPDGDQVVHV TKEEDPENWH VQIFRSIDSG
501: SVKGFPKDAK EATAQNLVSG KNLRIDRSIH LAYVKAIRSA QHFIYVENQY FLGSSYCWPS YRNAGANNLV PMEIALKIAS KIAASEPFAA YIVIPMWPEG
601: IPTSNAVQEI LFWQGQTMSM MYKIIAQALE NAGISQFFHP QDYLNFYCLG NREAKKRGGD GDNPTPQEHT HILGPNKRTS EGGEAQIPSS YGVGWIN

Best Arabidopsis Sequence Match ( AT4G35790.3 )
(BLAST)

001: MAEKVSEDVM LLHGDLDLKI VKARRLPNMD MFSEHLRRLF TACNACARPT DTDDVDPRDK GEFGDKNIRS HRKVITSDPY VTVVVPQATL ARTRVLKNSQ
101: EPLWDEKFNI SIAHPFAYLE FQVKDDDVFG AQIIGTAKIP VRDIASGERI SGWFPVLGAS GKPPKAETAI FIDMKFTPFD QIHSYRCGIA GDPERRGVRR
201: TYFPVRKGSQ VRLYQDAHVM DGTLPAIGLD NGKVYEHGKC WEDICYAISE AHHMIYIVGW SIFHKIKLVR ETKVPRDKDM TLGELLKYKS QEGVRVLLLV
301: WDDKTSHDKF GIKTPGVMGT HDEETRKFFK HSSVICVLSP RYASSKLGLF KQQVVGTLFT HHQKCVLVDT QAVGNNRKVT AFIGGLDLCD GRYDTPEHRI
401: LHDLDTVFKD DFHNPTFPAG TKAPRQPWHD LHCRIDGPAA YDVLINFEQR WRKATRWKEF SLRLKGKTHW QDDALIRIGR ISWILSPVFK FLKDGTSIIP
501: EDDPCVWVSK EDDPENWHVQ IFRSIDSGSV KGFPKYEDEA EAQHLECAKR LVVDKSIQTA YIQTIRSAQH FIYIENQYFL GSSYAWPSYR DAGADNLIPM
601: ELALKIVSKI RAKERFAVYV VIPLWPEGDP KSGPVQEILY WQSQTMQMMY DVIAKELKAV QSDAHPLDYL NFYCLGKREQ LPDDMPATNG SVV

Arabidopsis Description

PLDDELTAPhospholipase D delta [Source:UniProtKB/Swiss-Prot;Acc:Q9C5Y0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.