Factsheet for Solyc04g082000.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
vacuole 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400025590	Potato	cytosol	94.28	97.53
KRH60977	Soybean	cytosol	77.23	76.51
KRH51648	Soybean	cytosol	76.64	75.92
VIT_18s0001g00770.t01	Wine grape	nucleus	77.47	74.29
Bra034939.1-P	Field mustard	cytosol	73.18	73.71
Zm00001d006262_P001	Maize	cytoskeleton, cytosol, peroxisome	13.35	72.73
GSMUA_Achr1P07360_001	Banana	cytosol	61.5	70.49
Solyc01g103900.2.1	Tomato	cytosol	13.71	69.7
GSMUA_AchrUn_...	Banana	cytosol	70.32	68.76
Os09t0543100-02	Rice	plasma membrane	69.85	68.62
KXG36094	Sorghum	cytosol	69.96	68.34
Zm00001d006257_P009	Maize	cytosol	69.13	67.76
Solyc02g083340.2.1	Tomato	nucleus	69.49	67.32
TraesCS5A01G337100.2	Wheat	cytosol	69.01	67.17
Solyc02g061850.2.1	Tomato	cytosol	67.82	66.94
TraesCS5B01G336100.1	Wheat	cytosol	68.77	66.94
KRH37270	Soybean	cytosol	20.98	66.92
GSMUA_Achr1P14920_001	Banana	plastid	62.93	66.5
TraesCS5D01G341800.2	Wheat	cytosol	65.55	66.43
HORVU5Hr1G084740.4	Barley	plastid	55.3	64.9
GSMUA_Achr9P21120_001	Banana	nucleus	19.43	64.68
GSMUA_Achr11P...	Banana	cytosol	62.57	63.1
Zm00001d022594_P002	Maize	cytosol	66.51	63.05
Solyc10g024370.1.1	Tomato	cytosol	60.55	60.55
Solyc01g103910.1.1	Tomato	cytosol	49.94	60.11
CDX80734	Canola	cytosol	8.1	56.2
Solyc04g051140.1.1	Tomato	cytosol	12.87	53.73
Solyc08g080130.2.1	Tomato	nucleus	52.8	52.36
OQU84227	Sorghum	cytosol	54.83	50.05
Solyc01g091910.2.1	Tomato	plastid	53.16	49.83
Zm00001d015033_P001	Maize	extracellular, plastid, vacuole	54.83	49.41
TraesCS6B01G096200.1	Wheat	cytosol	50.06	48.55
TraesCS6A01G071700.1	Wheat	cytosol, nucleus, plastid	49.82	48.1
HORVU6Hr1G012780.6	Barley	cytosol, nucleus, plastid	48.87	47.18
Solyc08g066800.2.1	Tomato	plastid	45.29	47.09
Solyc08g066790.2.1	Tomato	plastid	44.82	46.59
Solyc03g116620.2.1	Tomato	plastid	44.93	46.49
Solyc06g068090.2.1	Tomato	plastid	44.82	46.48
Solyc08g045740.1.1	Tomato	cytosol	14.3	43.96
Solyc12g011170.1.1	Tomato	cytosol	43.5	43.04
Solyc10g017650.1.1	Tomato	cytosol	53.75	40.3
Os02t0120200-01	Rice	extracellular	25.74	23.74
Solyc01g100020.2.1	Tomato	cytosol, nucleus, peroxisome	24.55	19.58
Solyc01g065720.2.1	Tomato	cytosol	23.96	18.17

Protein Annotations

KEGG:00564+3.1.4.4	KEGG:00565+3.1.4.4	Gene3D:2.60.40.150	Gene3D:3.30.870.10	MapMan:5.7.2.4.3	InterPro:C2_dom
InterPro:C2_domain_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0004630	GO:GO:0005488	GO:GO:0005509
GO:GO:0005575	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987
GO:GO:0016020	GO:GO:0016042	GO:GO:0016787	GO:GO:0046470	GO:GO:0070290	InterPro:IPR000008
InterPro:IPR001736	InterPro:IPR035892	UniProt:K4BVS9	PFAM:PF00168	PFAM:PF00614	PFAM:PF12357
PFAM:PF13091	PIRSF:PIRSF036470	InterPro:PLD-like_dom	InterPro:PLipase_D/transphosphatidylase	InterPro:PLipase_D_C	InterPro:PLipase_D_fam
InterPro:PLipase_D_pln	PFscan:PS50004	PFscan:PS50035	PANTHER:PTHR18896	PANTHER:PTHR18896:SF112	SMART:SM00155
SMART:SM00239	SUPFAM:SSF49562	SUPFAM:SSF56024	EnsemblPlantsGene:Solyc04g082000.2	EnsemblPlants:Solyc04g082000.2.1	UniParc:UPI0002766285
SEG:seg	:	:	:	:	:

Description

Phospholipase D [Source:UniProtKB/TrEMBL;Acc:K4BVS9]

Coordinates

chr4:+:65817451..65825737

Molecular Weight (calculated)

95669.2 Da

IEP (calculated)

7.478

GRAVY (calculated)

-0.385

Length

839 amino acids

Sequence
(BLAST)

001: MADENCENVV YLHGDFDLKI IEARRLPNMD LVTERLSRCF TALDICRKPF TRRRRKGHRR KIITSDPYVT VCLTGATVAR TRVISNCQDP VWNEHFKIPL
101: AHPVSVVEFL VKDNDVFGAD YIGVATVLAE KIKSGELIDD WFPIIGPYGK PPKPDCAIRL QMRFIHCDGN PSYNGGISED FGLKASYFPV RHGGSVTLYQ
201: DAHVPDGMLP EIKLDDDKIF EHSKCWEDIC HAILEAHHLV YVVGWSIFHK VKLVREPSKP LPSGGDLTLG ELLKYKSEEG VRVLLLVWDD KTSHSKFFIQ
301: TDGVMQTHDE ETRKFFKHSS VNCVLAPRYA SSKLSIFKQQ VVGTLYTHHQ KCVIVDTQAS GNNRKVSAFL GGLDLCDGRY DTPEHRLFRD LDTVFKDDFH
401: NPTFSTGTKA PRQPWHDLHC KIEGPAAYDV LTNFEQRWRK ATKWSEFGRR LKKISHWHDD ALIKIERISW ITSPSSSVPN DDQSLWVSKE EDPENWHVQV
501: FRSIDSGSLK GFPKDVLLAE SQNLVCAKNL VIDRSIQMAY IQAIRQAQHF IYIENQYFLG SSYAWPSYKE AGADNLIPME LALKIASKIR AKERFAVYIV
601: IPMWPEGVPT SASVQEILYW QRQTMKMMYG IIAQELKSSQ LQDVHLSDYL NFYCLGNREE LHGESKSNYA SNGDLISASQ KFGRFMIYVH AKGMIVDDEY
701: VILGSANINQ RSMAGSRDTE IAMGAYQPHH TWAMKKRHPH GQVYGYRMSL WAEHMGKLDD IFTKPESLNC VKHVNEVAED NWKRFTAHEF KPLQGHLLKY
801: PVQVGTDGQV SSLPGHEYFP DVGGKILGAR TNLPDALTT

Best Arabidopsis Sequence Match ( AT4G35790.2 )
(BLAST)

001: MAEKVSEDVM LLHGDLDLKI VKARRLPNMD MFSEHLRRLF TACNACARPT DTDDVDPRDK GEFGDKNIRS HRKVITSDPY VTVVVPQATL ARTRVLKNSQ
101: EPLWDEKFNI SIAHPFAYLE FQVKDDDVFG AQIIGTAKIP VRDIASGERI SGWFPVLGAS GKPPKAETAI FIDMKFTPFD QIHSYRCGIA GDPERRGVRR
201: TYFPVRKGSQ VRLYQDAHVM DGTLPAIGLD NGKVYEHGKC WEDICYAISE AHHMIYIVGW SIFHKIKLVR ETKVPRDKDM TLGELLKYKS QEGVRVLLLV
301: WDDKTSHDKF GIKTPGVMGT HDEETRKFFK HSSVICVLSP RYASSKLGLF KQQVVGTLFT HHQKCVLVDT QAVGNNRKVT AFIGGLDLCD GRYDTPEHRI
401: LHDLDTVFKD DFHNPTFPAG TKAPRQPWHD LHCRIDGPAA YDVLINFEQR WRKATRWKEF SLRLKGKTHW QDDALIRIGR ISWILSPVFK FLKDGTSIIP
501: EDDPCVWVSK EDDPENWHVQ IFRSIDSGSV KGFPKYEDEA EAQHLECAKR LVVDKSIQTA YIQTIRSAQH FIYIENQYFL GSSYAWPSYR DAGADNLIPM
601: ELALKIVSKI RAKERFAVYV VIPLWPEGDP KSGPVQEILY WQSQTMQMMY DVIAKELKAV QSDAHPLDYL NFYCLGKREQ LPDDMPATNG SVVSDSYNFQ
701: RFMIYVHAKG MIVDDEYVLM GSANINQRSM AGTKDTEIAM GAYQPNHTWA HKGRHPRGQV YGYRMSLWAE HLGKTGDEFV EPSDLECLKK VNTISEENWK
801: RFIDPKFSEL QGHLIKYPLQ VDVDGKVSPL PDYETFPDVG GKIIGAHSMA LPDTLTT

Arabidopsis Description

PLDDELTAPhospholipase D delta [Source:UniProtKB/Swiss-Prot;Acc:Q9C5Y0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.