Factsheet for Zm00001d006262_P001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytoskeleton, cytosol

Predictor Summary:

peroxisome 1
mitochondrion 1
cytoskeleton 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytoskeleton, cytosol, peroxisome
Any Predictor:	cytosol, mitochondrion, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P21120_001	Banana	nucleus	82.47	50.4
PGSC0003DMT400009253	Potato	cytosol	71.43	42.15
CDY42882	Canola	nucleus	48.05	22.98
Zm00001d015818_P002	Maize	cytosol, nucleus, peroxisome	34.42	19.13
Zm00001d006257_P009	Maize	cytosol	100.0	17.99
KXG36094	Sorghum	cytosol	96.1	17.23
Zm00001d022594_P002	Maize	cytosol	96.1	16.72
GSMUA_Achr1P07360_001	Banana	cytosol	74.68	15.71
Os09t0543100-02	Rice	plasma membrane	86.36	15.57
TraesCS5A01G337100.2	Wheat	cytosol	86.36	15.43
TraesCS5B01G336100.1	Wheat	cytosol	85.71	15.31
GSMUA_Achr1P14920_001	Banana	plastid	76.62	14.86
PGSC0003DMT400025590	Potato	cytosol	72.73	13.81
GSMUA_AchrUn_...	Banana	cytosol	74.68	13.4
Solyc04g082000.2.1	Tomato	cytosol	72.73	13.35
KRH60977	Soybean	cytosol	73.38	13.34
TraesCS5D01G341800.2	Wheat	cytosol	69.48	12.92
KRH51648	Soybean	cytosol	70.13	12.75
Bra034939.1-P	Field mustard	cytosol	68.18	12.61
Solyc02g061850.2.1	Tomato	cytosol	68.83	12.47
KRH76589	Soybean	extracellular	69.48	12.38
VIT_00s0264g00100.t01	Wine grape	cytosol	70.13	12.37
Solyc02g083340.2.1	Tomato	nucleus	69.48	12.36
KRH28860	Soybean	mitochondrion	69.48	12.36
Bra017730.1-P	Field mustard	cytosol	66.88	12.28
Bra010512.1-P	Field mustard	cytosol	64.29	12.27
VIT_18s0001g00770.t01	Wine grape	nucleus	68.18	12.0
AT4G35790.1	Thale cress	cytosol	67.53	11.98
CDX72557	Canola	cytosol	66.23	11.79
CDY47037	Canola	cytosol	66.88	11.64
Zm00001d005484_P003	Maize	cytosol	65.58	11.62
CDY35793	Canola	cytosol	64.94	11.56
CDY67335	Canola	cytosol	64.29	11.43
CDY41630	Canola	cytosol	64.29	11.42
Zm00001d008727_P002	Maize	cytosol	55.19	10.47
Zm00001d015033_P001	Maize	extracellular, plastid, vacuole	62.34	10.31
Zm00001d005770_P001	Maize	cytosol	50.0	10.17
Zm00001d039670_P004	Maize	cytosol	53.25	10.1
Zm00001d046508_P001	Maize	cytosol, mitochondrion, plasma membrane	53.25	10.05
Zm00001d027386_P002	Maize	cytosol	53.9	9.95
Zm00001d029397_P001	Maize	cytosol, mitochondrion, peroxisome	53.9	9.68
Zm00001d023573_P002	Maize	plastid	22.08	9.39
Zm00001d037643_P001	Maize	cytosol	54.55	9.27
Zm00001d015256_P001	Maize	cytosol	24.68	9.18
Zm00001d029684_P001	Maize	peroxisome	58.44	8.59
Zm00001d037946_P001	Maize	cytosol, mitochondrion, nucleus, peroxisome	34.42	4.57
KRH37270	Soybean	cytosol	5.19	3.04
Zm00001d009075_P001	Maize	cytosol, nucleus, peroxisome	14.94	2.42
Zm00001d050470_P001	Maize	mitochondrion	4.55	1.76
CDX80734	Canola	cytosol	1.3	1.65
PGSC0003DMT400009250	Potato	cytosol	0.65	0.18
HORVU5Hr1G084740.4	Barley	plastid	0.0	0.0

Protein Annotations

EnsemblPlants:Zm00001d006262_P001	EnsemblPlants:Zm00001d006262_T001	EnsemblPlantsGene:Zm00001d006262	Gene3D:3.30.870.10	GO:GO:0003674	GO:GO:0003824
InterPro:IPR001736	InterPro:PLipase_D/transphosphatidylase	InterPro:PLipase_D_C	InterPro:PLipase_D_fam	KEGG:00564+3.1.4.4	KEGG:00565+3.1.4.4
PANTHER:PTHR18896	PANTHER:PTHR18896:SF86	PFAM:PF00614	PFAM:PF12357	PFscan:PS50035	ProteinID:ONM23231.1
SMART:SM00155	SUPFAM:SSF56024	UniParc:UPI000843A6CD	UniProt:A0A1D6EU86	MapMan:50.3.1	:

Description

Phospholipase D delta

Coordinates

chr2:+:203183372..203184196

Molecular Weight (calculated)

17152.3 Da

IEP (calculated)

5.191

GRAVY (calculated)

-0.382

Length

154 amino acids

Sequence
(BLAST)

001: MIYVHAKGMI VDDEYVILGS ANINQRSLAG SRDTEIAMGA YQPHYAWSTK NGHPDGQVYG YRTSLWAEHL GTIDDRFKDP SSLECVRFVN QIAVENWRRY
101: TAEEMSTLQG HLLKYPVKVE ADGKISPLPD QECFPDVGGK ILGASTSLPD SLTM

Best Arabidopsis Sequence Match ( AT4G11840.1 )
(BLAST)

001: MAYHPVYNET MSMGGGSSNE FGQWLDKQLV PFDTSSGSLR VELLHGNLDI WVKEAKHLPN MDGFHNTLVG GMFFGLGRRN HKVDGENSSK ITSDPYVTVS
101: ISGAVIGRTF VISNSENPVW MQHFDVPVAH SAAKVHFVVK DSDIIGSQII GAVEIPTEQL CSGNRIEGLF PILNSRGKPC KQGAVLSLSI QYIPMERMRL
201: YQKGVGFGVE CVGVPGTYFP LRKGGRVTLY QDAHVDDGTL PSVHLDGGIQ YRHGKCWEDM ADAIRRARRL IYITGWSVFH PVRLVRRNND PTQGTLGELL
301: KVKSQEGVRV LVLVWDDPTS RSLLGFSTKG LMNTSDEETR RFFKHSSVQV LLCPRYGGKG HSFIKKSEVE TIYTHHQKTM IVDAEAAQNR RKIVAFVGGL
401: DLCNGRFDTP KHPLFRTLKT IHKDDFHNPN FVTTADDGPR EPWHDLHSKI DGPAAYDVLA NFEERWMKAS KPRGIGRLRT SSDDSLLRLD RIPDIMGLSE
501: ASSANDNDPE SWHVQVFRSI DSSSVKGFPK DPKEATGRNL LCGKNILIDM SIHAAYVKAI RSAQHFIYIE NQYFLGSSFN WDSNKNLGAN NLIPMEIALK
601: IANKIRAREK FAAYIVIPMW PEGAPTSNPI QRILYWQHKT MQMMYQTIYK ALVEVGLDGQ LEPQDFLNFF CLGTREVGTR EVPDGTVSVY NSPRKPPQLN
701: AAQVQALKSR RFMIYVHSKG MVVDDEFVLI GSANINQRSL EGTRDTEIAM GGYQPHHSWA KKGSRPRGQI FGYRMSLWAE HLGFLEQEFE EPENMECVRR
801: VRQLSELNWR QYAAEEVTEM PGHLLKYPVQ VDRTGKVSSL PGYETFPDLG GKIIGSFLVV EENLTI

Arabidopsis Description

PLDGAMMA3Phospholipase D gamma 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9T052]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.