CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY67335	Canola	cytosol	95.16	95.27
CDX72557	Canola	cytosol	78.2	78.38
CDY47037	Canola	cytosol	78.2	76.61
PGSC0003DMT400009253	Potato	cytosol	20.53	68.2
KRH76589	Soybean	extracellular	66.09	66.32
KRH28860	Soybean	mitochondrion	66.21	66.28
Solyc02g083340.2.1	Tomato	nucleus	65.86	65.94
VIT_00s0264g00100.t01	Wine grape	cytosol	66.32	65.86
GSMUA_Achr1P07360_001	Banana	cytosol	55.13	65.3
Solyc02g061850.2.1	Tomato	cytosol	63.55	64.82
Zm00001d006262_P001	Maize	cytoskeleton, cytosol, peroxisome	11.42	64.29
PGSC0003DMT400009250	Potato	cytosol	40.48	63.47
Os09t0543100-02	Rice	plasma membrane	60.44	61.36
GSMUA_AchrUn_...	Banana	cytosol	60.44	61.07
KXG36094	Sorghum	cytosol	59.75	60.3
Zm00001d006257_P009	Maize	cytosol	59.28	60.05
GSMUA_Achr9P21120_001	Banana	nucleus	17.42	59.92
GSMUA_Achr1P14920_001	Banana	plastid	54.67	59.7
CDY35793	Canola	cytosol	59.4	59.54
TraesCS5B01G336100.1	Wheat	cytosol	59.05	59.4
TraesCS5A01G337100.2	Wheat	cytosol	58.94	59.28
TraesCS5D01G341800.2	Wheat	cytosol	56.29	58.94
GSMUA_Achr11P...	Banana	cytosol	55.59	57.93
HORVU5Hr1G084740.4	Barley	plastid	46.94	56.92
Zm00001d022594_P002	Maize	cytosol	56.98	55.82
CDY28756	Canola	cytosol, extracellular	8.07	55.56
CDY13283	Canola	mitochondrion	22.15	54.39
CDY51545	Canola	cytosol	8.77	53.15
CDX90807	Canola	cytosol	49.02	52.66
CDY41006	Canola	mitochondrion	9.34	51.92
CDX80734	Canola	cytosol	7.15	51.24
CDX86742	Canola	cytosol	49.83	51.0
CDY64184	Canola	mitochondrion	47.4	50.43
CDX90808	Canola	cytosol	45.67	49.87
OQU84227	Sorghum	cytosol	50.52	47.66
TraesCS6A01G071700.1	Wheat	cytosol, nucleus, plastid	46.83	46.72
TraesCS6B01G096200.1	Wheat	cytosol	46.48	46.59
CDY46254	Canola	cytosol	5.19	46.39
Zm00001d015033_P001	Maize	extracellular, plastid, vacuole	49.71	46.29
CDY42882	Canola	nucleus	17.07	45.96
CDX90066	Canola	cytosol	51.44	45.79
CDY13284	Canola	cytosol	24.22	45.75
HORVU6Hr1G012780.6	Barley	cytosol, nucleus, plastid	45.67	45.57
CDY20149	Canola	cytosol, nucleus, peroxisome	10.96	44.6
CDX88175	Canola	cytosol	37.83	44.26
CDY52961	Canola	cytosol, nucleus, peroxisome	50.63	44.25
CDX97705	Canola	cytosol	41.18	44.07
CDY30108	Canola	cytosol	41.18	44.07
CDY54926	Canola	cytosol, nucleus, peroxisome	50.75	43.87
CDX80505	Canola	cytosol	39.33	43.72
CDY21865	Canola	cytosol	40.83	43.6
CDY47540	Canola	cytosol	40.48	43.23
CDY60551	Canola	cytosol	39.79	42.49
CDY05351	Canola	cytosol	39.68	42.21
CDY15144	Canola	peroxisome	51.44	41.92
CDY05490	Canola	cytosol	39.33	41.84
CDY70643	Canola	cytosol, peroxisome	9.8	39.91
CDY20148	Canola	cytosol, peroxisome, plastid	17.99	39.1
CDY33065	Canola	cytosol	32.99	37.73
CDY24051	Canola	cytosol	32.64	37.34
CDX87920	Canola	cytosol	14.65	37.03
CDY63527	Canola	cytosol	13.84	35.93
Os02t0120200-01	Rice	extracellular	23.07	21.98
CDY18811	Canola	cytosol, nucleus, peroxisome	22.38	18.53
CDX92096	Canola	nucleus	22.61	18.11
CDX95904	Canola	cytosol, nucleus, peroxisome	22.61	18.01
CDY51604	Canola	cytosol	2.31	7.09

Protein Annotations

KEGG:00564+3.1.4.4	KEGG:00565+3.1.4.4	Gene3D:3.30.870.10	MapMan:50.3.1	GO:A0A078HSW7	UniProt:A0A078HSW7
InterPro:C2_dom	EnsemblPlants:CDY41630	ProteinID:CDY41630	ProteinID:CDY41630.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004630	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575	GO:GO:0006629	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016020	GO:GO:0016042	GO:GO:0016787
GO:GO:0046470	GO:GO:0070290	EnsemblPlantsGene:GSBRNA2T00073287001	InterPro:IPR000008	InterPro:IPR001736	PFAM:PF00168
PFAM:PF00614	PFAM:PF12357	PFAM:PF13091	PIRSF:PIRSF036470	InterPro:PLD-like_dom	InterPro:PLipase_D/transphosphatidylase
InterPro:PLipase_D_C	InterPro:PLipase_D_fam	InterPro:PLipase_D_pln	PFscan:PS50004	PFscan:PS50035	PANTHER:PTHR18896
PANTHER:PTHR18896:SF86	MetaCyc:PWY-3561	MetaCyc:PWY-7039	SMART:SM00155	SMART:SM00239	SUPFAM:SSF49562
SUPFAM:SSF56024	UniParc:UPI0004EBB69F	SEG:seg	:	:	:

Description

BnaC03g62540DPhospholipase D [Source:UniProtKB/TrEMBL;Acc:A0A078HSW7]

Coordinates

chrLK032502:+:50444..54587

Molecular Weight (calculated)

99037.0 Da

IEP (calculated)

7.006

GRAVY (calculated)

-0.437

Length

867 amino acids

Sequence
(BLAST)

001: MAENVSEDVI LLHGDLDLKI VQARRLPNRD TFSERMRRCF KPCNSCIKPT TDDYDGEASS DDDDENIRGL PRNTSDPYVT VSVPQATLAR THVLKNASDP
101: VWNRHFKVSV AHPLSYLKLK VKDYDVSGAQ TIGTVRIPVQ QIASGERISG WFPVLGRSGK PPKKETALHI DLKFTPFDKI QPKTTLGVMG TYFPLRKGSQ
201: VKLYQDAHVM DGMLPEIRLE NGEVYQHGKC WEDICHAICE AHHMIYIVGW SVFHKVQLVR EPTRVLPRGG DLTLGELLKY KSEEGVRVLL LVWDDKSSRD
301: KFGISTPGVM GTHDEETRKF FNHSSVKCIL SPRYASNKLG LFKQQAINGL FTRVSVWHGW YLNQVVGTLF THHQKCVLVD TQAVGSNRKV TAFIGGIDLC
401: DGRYDTPEHR IFHDLDTVFK DDFHNPTFPS GAIAPRQPWH DMHCRLDGPA AYDVLINFEQ RWRKATRWKE FNLNGKTLWQ DDSLLRIGRI SWILNPKFKY
501: RIDGVSHVPE DDPIVYVSNE DNPENWHVQV FRSIDSGSVK GFLKFENDAE ALHLEYDKRL VVDKSIQTAY IQIIRSAQHF IYIENQYFLG SSYAWLDYND
601: AGADNLIPME LALKITSKIR AKERFAVYVV IPMWPEGDPK SGPMQEILYW QSQTMQMMYD VIARELKSVQ SNAHPLDYLN FYCLGKREQF PDHDMPATNV
701: SAVTDSYKFK RFMIYVHAKG MVVDDEYVLM GSANINQRSM AGTKDTEIAM GAYQPHHTWA NKGKHPRGQV YGYRMSLWAE HLGKTGDEFV EPGDLECVKN
801: VNEIAERNWR KFIDSEFSEL QGHLIKYPLH VDIDGNVISL PGYDSFPDVG GKIIGDHSKA IPDTLTT

Best Arabidopsis Sequence Match ( AT2G42010.1 )
(BLAST)

0001: MDNHGPRYPY PYGQYPYPYP YPAPYRPPSS EPYPPPPTNQ YSAPYYPYPP PPYATPPPYA SPPPPHQHTS GSHSGPLDYS HNPQPSSLAA APPEYHRHSF
0101: DYQPSPYPYQ PQGNFGAYGP PPPHYSYQEP AQYPPPETKP QEPLPPPQQT QGFQEYRRQD CLSTGGTGHD NVSNSGSSYP PVDELLGGLH ISTNQPGPSV
0201: PQLSSLPSNS WQSRPGDLYG YPNSSFPSNS HLPQLGRVDS SSSYYASTES PHSADMQMTL FGKGSLKVLL LHGNLDIWIY HAKNLPNMDM FHKTLGDMFG
0301: RLPGKIEGQL TSKITSDPYV SVSVAGAVIG RTYVMSNSEN PVWMQHFYVP VAHHAAEVHF VVKDSDVVGS QLIGLVTIPV EQIYSGAKIE GTYPILNSNG
0401: KPCKPGANLS LSIQYTPMDK LSVYHHGVGA GPDYQGVPGT YFPLRKGGTV RLYQDAHVPE GMLPGIRLDN GMSYEHGKCW HDMFDAIRQA RRLIYITGWS
0501: VWHKVKLIRD KLGPASECTL GELLRSKSQE GVRVLLLIWD DPTSRSILGY KTDGVMATHD EETRRFFKHS SVQVLLCPRN AGKRHSWVKQ REVGTIYTHH
0601: QKNVIVDADA GGNRRKIIAF VGGLDLCDGR YDTPQHPLFR TLQTIHKDDF HNPTFTGNLS GCPREPWHDL HSKIDGPAAY DVLTNFEERW LKAAKPSGIK
0701: KFKTSYDDAL LRIDRIPDIL GVSDTPTVSE NDPEAWHVQI FRSIDSNSVK GFPKDPKDAT CKNLVCGKNV LIDMSIHTAY VKAIRAAQHF IYIENQYFIG
0801: SSYNWNAHKD IGANNLIPME IALKIAEKIR ANERFAAYIV IPMWPEGVPT GAATQRILYW QHKTIQMMYE TIYKALVETG LEGAFSPQDY LNFFCLGNRE
0901: MVDGIDNSGT GSPSNANTPQ ALSRKSRRFM VYVHSKGMVV DDEYVVIGSA NINQRSMEGT RDTEIAMGAY QPQHTWARKH SGPRGQIYGY RMSLWAEHMA
1001: TLDDCFTQPE SIECVRKVRT MGERNWKQFA AEEVSDMRGH LLKYPVEVDR KGKVRPLPGS ETFPDVGGNI VGSFIAIQEN LTI

Arabidopsis Description

PLDBETA1phospholipase D beta 1 [Source:TAIR;Acc:AT2G42010]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.