CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY24051	Canola	cytosol	96.17	96.17
AT1G55180.1	Thale cress	cytosol	86.94	86.48
VIT_09s0002g02390.t01	Wine grape	cytosol	63.98	64.49
PGSC0003DMT400006661	Potato	cytosol	48.81	64.35
KRH10002	Soybean	cytosol	63.19	63.11
KRH44164	Soybean	cytosol	63.72	62.24
KRH47139	Soybean	cytosol	62.66	61.77
KRH23329	Soybean	cytosol	19.0	54.34
CDY20149	Canola	cytosol, nucleus, peroxisome	14.12	50.23
CDY28756	Canola	cytosol, extracellular	8.05	48.41
CDY70643	Canola	cytosol, peroxisome	12.93	46.01
CDY51545	Canola	cytosol	8.31	44.06
CDY13283	Canola	mitochondrion	19.66	42.21
Os09t0421300-01	Rice	cytosol	44.72	41.49
CDX88175	Canola	cytosol	40.5	41.43
TraesCS5B01G222500.1	Wheat	cytosol	44.85	41.16
Zm00001d005770_P001	Maize	cytosol	41.03	41.08
HORVU5Hr1G064520.1	Barley	cytosol	44.99	41.03
TraesCS5A01G223500.1	Wheat	cytosol	44.59	40.92
EER98913	Sorghum	cytosol	44.46	40.75
TraesCS5D01G231100.1	Wheat	cytosol	44.59	40.72
CDX80505	Canola	cytosol	41.16	40.0
CDX97705	Canola	cytosol	42.61	39.88
CDY47540	Canola	cytosol	42.61	39.78
CDY60551	Canola	cytosol	42.48	39.66
CDY30108	Canola	cytosol	42.22	39.51
CDY21865	Canola	cytosol	42.08	39.29
CDY41006	Canola	mitochondrion	8.05	39.1
CDY05490	Canola	cytosol	41.56	38.65
CDY05351	Canola	cytosol	41.56	38.65
CDY64184	Canola	mitochondrion	38.52	35.83
CDX90807	Canola	cytosol	37.86	35.56
CDX86742	Canola	cytosol	39.31	35.18
HORVU7Hr1G082870.1	Barley	cytosol	25.46	35.15
CDY46254	Canola	cytosol	4.49	35.05
CDY35793	Canola	cytosol	39.45	34.57
CDX90808	Canola	cytosol	35.49	33.88
CDX72557	Canola	cytosol	37.99	33.29
CDY47037	Canola	cytosol	38.52	32.99
CDY41630	Canola	cytosol	37.73	32.99
CDY67335	Canola	cytosol	37.6	32.91
CDY20148	Canola	cytosol, peroxisome, plastid	17.15	32.58
CDX80734	Canola	cytosol	5.15	32.23
CDX90066	Canola	cytosol	39.84	31.01
CDY52961	Canola	cytosol, nucleus, peroxisome	39.31	30.04
CDY54926	Canola	cytosol, nucleus, peroxisome	39.45	29.81
CDX87920	Canola	cytosol	13.19	29.15
CDY63527	Canola	cytosol	12.66	28.74
CDY15144	Canola	peroxisome	39.84	28.38
CDY13284	Canola	cytosol	17.02	28.1
CDY42882	Canola	nucleus	10.82	25.47
CDX92096	Canola	nucleus	24.14	16.91
CDX95904	Canola	cytosol, nucleus, peroxisome	24.01	16.73
CDY18811	Canola	cytosol, nucleus, peroxisome	22.96	16.62
CDY51604	Canola	cytosol	2.37	6.38

Protein Annotations

KEGG:00564+3.1.4.4	KEGG:00565+3.1.4.4	Gene3D:2.60.40.150	Gene3D:3.30.870.10	MapMan:5.7.2.4.4	GO:A0A078H387
UniProt:A0A078H387	InterPro:C2_dom	InterPro:C2_domain_sf	EnsemblPlants:CDY33065	ProteinID:CDY33065	ProteinID:CDY33065.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0004630	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575
GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016020
GO:GO:0016042	GO:GO:0016787	GO:GO:0046470	GO:GO:0070290	EnsemblPlantsGene:GSBRNA2T00053690001	InterPro:IPR000008
InterPro:IPR001736	InterPro:IPR035892	PFAM:PF00168	PFAM:PF12357	PFAM:PF13091	PIRSF:PIRSF036470
InterPro:PLD-like_dom	InterPro:PLipase_D/transphosphatidylase	InterPro:PLipase_D_C	InterPro:PLipase_D_fam	InterPro:PLipase_D_pln	PFscan:PS50035
PANTHER:PTHR18896	PANTHER:PTHR18896:SF79	MetaCyc:PWY-3561	MetaCyc:PWY-7039	SMART:SM00155	SUPFAM:SSF49562
SUPFAM:SSF56024	UniParc:UPI0004EBAC52	:	:	:	:

Description

BnaC06g07140DPhospholipase D [Source:UniProtKB/TrEMBL;Acc:A0A078H387]

Coordinates

chrLK032305:+:180700..183165

Molecular Weight (calculated)

86229.1 Da

IEP (calculated)

7.307

GRAVY (calculated)

-0.376

Length

758 amino acids

Sequence
(BLAST)

001: MELEEQKKFF HGTLEITIFD ATPFSPTFPF HCICTKPRPA YVTIKLNKKK VAKTSSELDR VWNQTFQILC AHPVSDTTIT ITLKTHCSVL GRFRISAEQI
101: LTSNTAIVNG CFPLTTNNGS KKPNLKLKCM MWFRPAYLEP GWCKTFEGEP FQGIKNASFP QRSNCRVVLY QDAHHKATFD PRVHDVPCNA RNLWEDVYKA
201: IDCARHLVYI AGWALNPNLV LVRDEETEIP HAVGVTIGEL LKRKAHEGVA VRVMVWNDES SLPMIKNKGV MRTNDQTALS YFRDTSVVCR LCPRSHKKLP
301: TAFAHHQKTI TVDTRVTNTN TKEREIMSFL GGFDLCDGRY DTEEHSLFRT LGTSDDFYQT SLAGAKLSRG GPREPWHDCH VCVVGAAAWD VLKNFEQRWT
401: KQCNPSVLVN TSGIRNLVNS ATTEEDDRNW NVQVLRSIDH VSATEMPRGL QVERSVHDGY VAAIRKAERF IYIENQYFMG GCEHWEGKNG SGCTNLIPVE
501: IALKIAAKIR EKERFAVYIV IPMWPEGPPE SETVEEMLHW TRETMTMMYK IIGEAIWEVG DGSHPRDYLN FFCLANREEK REGEYEAASS PHPKTQYWNA
601: QRNRRFMVYV HSKIMIVDDA YVLIGSANIN QRSMDGCRDT EIAIGCYQTD TTKTNEIRAY RLSLWYEHTG GKITVDELSF SEPESLECVR GLLTIGEQMW
701: DIYSGEKVVD MNGVHLVVYP ISVTTDGAVE KIGDGVFPDT KTLVRGKRSK MLPTVLTT

Best Arabidopsis Sequence Match ( AT1G55180.1 )
(BLAST)

001: MELEEQKKYF HGTLEITIFD ATPFSPPFPF NCICTKPKAA YVTIKINKKK VAKTSSEYDR IWNQTFQILC AHPVTDTTIT ITLKTRCSVL GRFRISAEQI
101: LTSNSAVING FFPLIADNGS TKRNLKLKCL MWFRPAYLEP GWCRALEEAS FQGIRNASFP QRSNCRVVLY QDAHHKATFD PRVDDVPFNA RNLWEDVYKA
201: IESARHLVYI AGWALNPNLV LVRDNETEIP HAVGVTVGEL LKRKSEEGVA VRVMLWNDET SLPMIKNKGV MRTNVERALA YFRNTNVVCR LCPRLHKKLP
301: TAFAHHQKTI TLDTRVTNSS TKEREIMSFL GGFDLCDGRY DTEEHSLFRT LGTEADFYQT SVAGAKLSRG GPREPWHDCH VSVVGGAAWD VLKNFEQRWT
401: KQCNPSVLVN TSGIRNLVNL TGPTEENNRK WNVQVLRSID HISATEMPRG LPVEKSVHDG YVAAIRKAER FIYIENQYFM GSCDHWESKN DKICSGCTNL
501: IPVEIALKIA AKIRARERFA VYIVIPMWPE GPPESETVEE ILHWTRETMS MMYQIIGEAI WEVGDKSHPR DYLNFFCLAN REEKRDGEFE AVSSPHQKTH
601: YWNAQRNRRF MVYVHSKLMI VDDTYILIGS ANINQRSMDG CRDTEIAIGC YQTNTNNTNE IQAYRLSLWY EHTGGKITAD DLSSSEPESL ECVRGLRTIG
701: EQMWEIYSGD KVVDMLGIHL VAYPISVTGD GAVEEVGDGC FPDTKTLVKG KRSKMFPPVL TT

Arabidopsis Description

PLDALPHA4Phospholipase D alpha 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9C888]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.