CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY46254	Canola	cytosol	12.09	98.97
Bra000753.1-P	Field mustard	cytosol	98.87	98.87
CDY51545	Canola	cytosol	15.62	86.71
CDY13283	Canola	mitochondrion	36.52	82.15
CDX90807	Canola	cytosol	79.09	77.82
CDY41006	Canola	mitochondrion	15.24	77.56
CDY64184	Canola	mitochondrion	78.09	76.07
CDY28756	Canola	cytosol, extracellular	11.71	73.81
CDX86742	Canola	cytosol	77.83	72.96
CDY13284	Canola	cytosol	36.9	63.83
KRH77470	Soybean	cytosol	10.33	59.85
TraesCS1D01G189300.1	Wheat	cytosol	60.33	59.14
TraesCS1B01G195200.1	Wheat	cytosol	60.33	59.14
VIT_02s0025g04620.t01	Wine grape	cytosol	63.1	58.94
Solyc08g080130.2.1	Tomato	nucleus	62.59	58.75
KRH77469	Soybean	nucleus	5.16	58.57
PGSC0003DMT400058531	Potato	plastid	62.34	58.3
KRH77467	Soybean	nucleus	62.22	57.91
KRG93706	Soybean	nucleus	20.78	56.7
TraesCS1A01G365100.2	Wheat	mitochondrion	59.07	56.64
TraesCS1B01G382600.1	Wheat	mitochondrion	58.94	56.52
KXG40331	Sorghum	cytosol	58.44	56.17
TraesCS1D01G370600.1	Wheat	cytosol	58.56	56.16
GSMUA_Achr8P12030_001	Banana	plastid	56.8	56.09
HORVU4Hr1G085550.2	Barley	cytosol	58.31	55.72
TraesCS4D01G346700.1	Wheat	cytosol	58.31	55.72
HORVU1Hr1G079150.1	Barley	cytosol	58.06	55.68
Os03t0119100-01	Rice	plasma membrane	58.31	55.45
Zm00001d027386_P002	Maize	cytosol	58.19	55.4
TraesCS5A01G520900.1	Wheat	cytosol	57.68	55.11
Zm00001d050470_P001	Maize	mitochondrion	27.08	54.02
Zm00001d015818_P002	Maize	cytosol, nucleus, peroxisome	18.77	53.79
TraesCS4B01G352300.1	Wheat	cytosol	57.68	53.44
GSMUA_Achr4P24890_001	Banana	cytosol, plastid	58.94	52.88
CDX90066	Canola	cytosol	64.48	52.57
CDY52961	Canola	cytosol, nucleus, peroxisome	62.47	50.0
CDY54926	Canola	cytosol, nucleus, peroxisome	62.59	49.55
Zm00001d015256_P001	Maize	cytosol	25.82	49.52
CDY15144	Canola	peroxisome	64.48	48.12
GSMUA_Achr5P20150_001	Banana	cytosol	59.7	47.54
Zm00001d029684_P001	Maize	peroxisome	60.96	46.18
CDY67335	Canola	cytosol	50.25	46.07
EER92041	Sorghum	cytosol, nucleus, peroxisome	60.83	45.87
CDY41630	Canola	cytosol	49.87	45.67
CDX72557	Canola	cytosol	49.37	45.32
Os10t0524400-01	Rice	plasma membrane	59.57	45.22
CDY20149	Canola	cytosol, nucleus, peroxisome	12.09	45.07
CDY47037	Canola	cytosol	49.87	44.75
CDY35793	Canola	cytosol	48.49	44.51
TraesCS1A01G187400.1	Wheat	peroxisome	60.83	43.63
HORVU1Hr1G048970.1	Barley	cytosol, nucleus, peroxisome	60.71	43.46
CDY70643	Canola	cytosol, peroxisome	11.21	41.78
CDY30108	Canola	cytosol	42.57	41.73
CDY60551	Canola	cytosol	42.57	41.63
CDX97705	Canola	cytosol	42.44	41.6
CDX88175	Canola	cytosol	38.66	41.43
CDY47540	Canola	cytosol	42.32	41.38
CDX80734	Canola	cytosol	6.3	41.32
CDY21865	Canola	cytosol	41.81	40.89
CDX80505	Canola	cytosol	39.8	40.51
CDY05490	Canola	cytosol	39.67	38.65
CDY05351	Canola	cytosol	39.67	38.65
CDY24051	Canola	cytosol	34.38	36.02
CDY33065	Canola	cytosol	33.88	35.49
CDY20148	Canola	cytosol, peroxisome, plastid	17.51	34.84
CDY42882	Canola	nucleus	13.98	34.47
CDX87920	Canola	cytosol	13.85	32.07
CDY63527	Canola	cytosol	13.22	31.44
CDX92096	Canola	nucleus	22.17	16.27
CDY18811	Canola	cytosol, nucleus, peroxisome	21.28	16.14
CDX95904	Canola	cytosol, nucleus, peroxisome	22.04	16.08
CDY51604	Canola	cytosol	1.89	5.32

Protein Annotations

KEGG:00564+3.1.4.4	KEGG:00565+3.1.4.4	Gene3D:2.60.40.150	Gene3D:3.30.870.10	MapMan:5.7.2.4.2	GO:A0A078DUC8
InterPro:C2_dom	InterPro:C2_domain_sf	EnsemblPlants:CDX90808	ProteinID:CDX90808	ProteinID:CDX90808.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0004630	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575	GO:GO:0006629
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016787	GO:GO:0046470
EnsemblPlantsGene:GSBRNA2T00151515001	InterPro:IPR000008	InterPro:IPR001736	InterPro:IPR035892	PFAM:PF00168	PFAM:PF00614
PFAM:PF12357	PFAM:PF13091	PIRSF:PIRSF036470	InterPro:PLD-like_dom	InterPro:PLipase_D/transphosphatidylase	InterPro:PLipase_D_C
InterPro:PLipase_D_fam	InterPro:PLipase_D_pln	PFscan:PS50004	PFscan:PS50035	PANTHER:PTHR18896	PANTHER:PTHR18896:SF65
MetaCyc:PWY-3561	MetaCyc:PWY-7039	SMART:SM00155	SMART:SM00239	SUPFAM:SSF49562	SUPFAM:SSF56024
UniParc:UPI0004EE44CF	:	:	:	:	:

Description

BnaA03g24880D

Coordinates

chrLK031864:-:651544..655057

Molecular Weight (calculated)

89866.5 Da

IEP (calculated)

8.247

GRAVY (calculated)

-0.458

Length

794 amino acids

Sequence
(BLAST)

001: MSMEGSSTGS VRGELLHGNL DICVKEAKNL PNMDRLGKFT RNNNTSDPFV TVFIAGAKIG TTFVINNNEN PVWMQHFYVP VAHHAEVVKF VLEDSDQLGA
101: KFIGDVGIPT EELCSGNRIE GLFPILNSSG KPCKKGAVLS LSIQYSPVEM MKVYQMGVGN ECEGVPDLDG GMKYIHGKCW EDMDYAIRKA KNLIYITGWS
201: VYHPVRLVRR NNDPTDGTLG ELLKKRSKEG VRVLLLVWDD PTSRSFPKYR KQGVMNTSDE ETRHFFKNSS VQVIICPRSD AEGLHGLVKK SEVETYYTHH
301: QKTVIVDADA GQGRRKIVGF VGGLDVCNGR FDTPNHPLFT TLKTLHKDDV HNPNFVPNAE DGPRQPWHDL HSKIDGPGAY DLLTNFEQRW EKAVKKQHKI
401: WKHRSCSDDA LLKINMIPEI IGLSEASSTN DSDPESWHVQ VFRSIDSTSV KGFPKDPKED TGRNLRCGKN ILVDMSIHTA YVKAIRSAQH FIYIENQYFS
501: GSSFNWCSHK DLGANNLIPM EIALKIASKI RAREKFAAYI VVPMWPEGDP TDIFMQGILY WQYKTMQMMY QTIYKALVEA ELDGQYEPQD YLNFFCLGTR
601: EASDETVSKY SSRNQPKKIA KPNAAQVQAL KSRRFMIYVH SKGMVVDDEF VLIGSANINK RSLEGTRDTE IAMGGYQLHH SWAKKGSRPR GQIYGYRMSL
701: WAEHLGFLEQ GFEEPENMEC VRRVRHLSEL NWRQYAAEEV TVMTSHLLKY PVQVDRTGKV SSLPGCKTFP DVGGKIIGHV LWAGTKPRHL EVTL

Best Arabidopsis Sequence Match ( AT4G11830.2 )
(BLAST)

001: MSMGGGSNHE FGQWLDQQLV PLATSSGSLM VELLHGNLDI WVKEAKHLPN MICYRNKLVG GISFSELGRR IRKVDGEKSS KFTSDPYVTV SISGAVIGRT
101: FVISNSENPV WMQHFDVPVA HSAAEVHFVV KDNDPIGSKI IGVVGIPTKQ LCSGNRIEGL FPILNSSGKP CRKGAMLSLS IQYTPMERMR LYQKGVGSGV
201: ECVGVPGTYF PLRKGGRVTL YQDAHVDDGT LPSVHLDGGI QYRHGKCWED MADAIRRARR LIYITGWSVF HPVRLVRRNN DPTEGTLGEL LKVKSQEGVR
301: VLVLVWDDPT SMSFPGFSTK GLMNTSDEET RRFFKHSSVQ VLLCPRYGGK GHSFIKKSEV ETIYTHHQKT MIVDAEAAQN RRKIVAFVGG LDLCNGRFDT
401: PKHSLFGTLK TLHKDDFHNP NFVTTEDVGP REPWHDLHSK IDGPAAYDVL ANFEERWMAS KPRGIGKGRT SFDDSLLRIN RIPDIMGLSE ASSANDNDPE
501: SWHVQVFRSI DSTSVKGFPK DPEEATGRNL LCGKNILIDM SIHAAYVKAI RSAQHFIYIE NQYFLGSSFN WDSNKDLGAN NLIPMEIALK IANKIRAREN
601: FAAYIVIPMW PEGAPTSKPI QRILYWQHKT MQMMYQTIYK ALLEVGLDGQ LEPQDFLNFF CLGNREVGTR EVPDGTVNVY NCPRKPPQPN AAQVQALKSR
701: RFMIYVHSKG MVVDDEFVLI GSANINQRSL EGTRDTEIAM GGYQPHHSWA KKGSRPRGQI FGYRMSLWAE HLGFLEQEFE EPENMECVRR VRQLSELNWG
801: QYAAEEVTEM SGHLLKYPVQ VDKTGKVSSL PGCETFPDLG GKIIGSFLTL QENLTI

Arabidopsis Description

PLDGAMMA2Phospholipase D gamma 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9T051]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.