Factsheet for Zm00001d027386_P002

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d013757_P010
Zm00001d033159_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G11850.1	Zm00001d013757_P010	AT4G26630.1	25387881
AT4G11850.1	Zm00001d033159_P001	AT4G26630.1	25387881

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG40331	Sorghum	cytosol	94.36	95.28
Zm00001d050470_P001	Maize	mitochondrion	40.53	84.92
Os03t0119100-01	Rice	plasma membrane	81.41	81.32
HORVU4Hr1G085550.2	Barley	cytosol	78.06	78.34
TraesCS5A01G520900.1	Wheat	cytosol	77.58	77.86
TraesCS4D01G346700.1	Wheat	cytosol	77.34	77.62
TraesCS4B01G352300.1	Wheat	cytosol	77.46	75.38
PGSC0003DMT400000378	Potato	cytosol	22.3	70.99
CDY41006	Canola	mitochondrion	13.19	70.51
Zm00001d015256_P001	Maize	cytosol	34.41	69.32
PGSC0003DMT400026602	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	25.3	68.95
Zm00001d015818_P002	Maize	cytosol, nucleus, peroxisome	22.9	68.95
GSMUA_Achr8P12030_001	Banana	plastid	66.07	68.53
KRG89825	Soybean	cytoskeleton, cytosol, peroxisome	23.86	68.38
Bra022740.1-P	Field mustard	cytosol, extracellular	10.31	68.25
CDY28756	Canola	cytosol, extracellular	10.31	68.25
CDY13283	Canola	mitochondrion	28.54	67.42
Bra000752.1-P	Field mustard	cytosol, nucleus, peroxisome	40.77	64.64
Solyc08g080130.2.1	Tomato	nucleus	65.23	64.3
PGSC0003DMT400058531	Potato	plastid	65.23	64.08
CDX86742	Canola	cytosol	63.79	62.81
Bra014871.1-P	Field mustard	cytosol	63.67	62.69
VIT_02s0025g04620.t01	Wine grape	cytosol	63.79	62.59
AT4G11850.1	Thale cress	cytosol	63.31	61.54
Solyc01g091910.2.1	Tomato	plastid	65.59	61.12
CDY64184	Canola	mitochondrion	59.59	60.98
CDX90807	Canola	cytosol	58.99	60.97
AT4G11830.2	Thale cress	cytosol	62.35	60.75
KRH77467	Soybean	nucleus	62.11	60.73
AT4G11840.1	Thale cress	cytosol	62.59	60.28
Zm00001d029684_P001	Maize	peroxisome	75.06	59.73
KRG93706	Soybean	nucleus	20.38	58.42
Bra000753.1-P	Field mustard	cytosol	55.4	58.19
CDX90808	Canola	cytosol	55.4	58.19
AT4G00240.1	Thale cress	cytosol	64.03	57.61
KRH77469	Soybean	nucleus	4.8	57.14
CDY13284	Canola	cytosol	31.41	57.08
CDX90066	Canola	cytosol	65.83	56.37
GSMUA_Achr5P20150_001	Banana	cytosol	67.27	56.27
KRH65182	Soybean	cytosol	50.24	55.2
CDY52961	Canola	cytosol, nucleus, peroxisome	64.51	54.23
KRH77470	Soybean	cytosol	8.87	54.01
Zm00001d006262_P001	Maize	cytoskeleton, cytosol, peroxisome	9.95	53.9
CDY54926	Canola	cytosol, nucleus, peroxisome	64.51	53.64
KRH48290	Soybean	nucleus	65.11	51.86
CDY15144	Canola	peroxisome	65.95	51.69
Bra033225.1-P	Field mustard	cytosol	65.95	51.4
VIT_15s0048g01160.t01	Wine grape	cytosol	65.59	50.32
Zm00001d006257_P009	Maize	cytosol	51.2	49.88
AT2G42010.2	Thale cress	peroxisome	65.83	49.55
CDY46254	Canola	cytosol	5.76	49.48
KRH01625	Soybean	cytosol	64.87	49.32
KRH70487	Soybean	cytosol	64.75	48.82
Solyc10g017650.1.1	Tomato	cytosol	64.75	48.26
Zm00001d022594_P002	Maize	cytosol	50.12	47.23
Zm00001d005484_P003	Maize	cytosol	49.04	47.07
Zm00001d039670_P004	Maize	cytosol	44.0	45.2
Zm00001d046508_P001	Maize	cytosol, mitochondrion, plasma membrane	44.0	44.98
Zm00001d008727_P002	Maize	cytosol	43.29	44.46
Zm00001d015033_P001	Maize	extracellular, plastid, vacuole	48.32	43.29
Zm00001d005770_P001	Maize	cytosol	37.41	41.22
Zm00001d029397_P001	Maize	cytosol, mitochondrion, peroxisome	41.85	40.72
Zm00001d037643_P001	Maize	cytosol	42.93	39.51
Zm00001d023573_P002	Maize	plastid	17.03	39.23
Bra008515.1-P	Field mustard	mitochondrion, plastid	64.63	37.17
Zm00001d009075_P001	Maize	cytosol, nucleus, peroxisome	20.14	17.7
Zm00001d037946_P001	Maize	cytosol, mitochondrion, nucleus, peroxisome	22.42	16.13

Protein Annotations

KEGG:00564+3.1.4.4	KEGG:00565+3.1.4.4	EntrezGene:103630917	Gene3D:2.60.40.150	Gene3D:3.30.870.10	MapMan:5.7.2.4.2
UniProt:A0A1D6JLG0	InterPro:C2_dom	InterPro:C2_domain_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0004630
GO:GO:0005488	GO:GO:0005509	GO:GO:0005575	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009987	GO:GO:0016020	GO:GO:0016042	GO:GO:0016787	GO:GO:0046470
GO:GO:0070290	InterPro:IPR000008	InterPro:IPR001736	InterPro:IPR035892	ProteinID:ONL92986.1	PFAM:PF00168
PFAM:PF00614	PFAM:PF12357	PIRSF:PIRSF036470	InterPro:PLipase_D/transphosphatidylase	InterPro:PLipase_D_C	InterPro:PLipase_D_fam
InterPro:PLipase_D_pln	PFscan:PS50004	PFscan:PS50035	PANTHER:PTHR18896	PANTHER:PTHR18896:SF61	SMART:SM00155
SMART:SM00239	SUPFAM:SSF49562	SUPFAM:SSF56024	UniParc:UPI000844D822	EnsemblPlantsGene:Zm00001d027386	EnsemblPlants:Zm00001d027386_P002
EnsemblPlants:Zm00001d027386_T002	SEG:seg	:	:	:	:

Description

phospholipase D15

Coordinates

chr1:-:4121780..4126371

Molecular Weight (calculated)

94390.4 Da

IEP (calculated)

6.987

GRAVY (calculated)

-0.366

Length

834 amino acids

Sequence
(BLAST)

001: MPVQDDDESV SWLVHGSAGD APAVLLHGSL DIWIHEARNL PNKDILSKRM RDLLCKPSEG MTSDPYVTVQ VASAVVARTF VIPDDENPVW AQQFLVPVAH
101: EAATVNFVVK DSDVVGAELI GVVAVRADQL QAGDMVEGAY PVLERNGKEC APGAVLRLSV QYVPVARLTM YHHGVTPGPD FAGVPRTYFP LRRGGKVTLY
201: QDAHVPDGTL PEVRLGNGDC YRHGQCWRDV YDAICQARRL IYITGWSVFH TIHLVRDGHD DMALGDLLRR KSQEGVRVLL LVWDDPTSRR LLGIKMEGYM
301: GTRDEETRRF FKHSSVQILL CPRSAGKRHS WVKQQVLYFS LNYCTIFTHH QKTVILDADA GNHRRKIVAF VGGLDLCGGR YDTPKHTLFR TLQTFHKEDY
401: YNPNFAVEDA RGPREPWHDL HSKIDGPAAY DVLKNFEERW LKASKRSAAK KLSKLSRSHN DSLLWINKIP DIIAIDDEIY SNDDDPERWD VQIFRSIDSN
501: SVKGFPKDPR EATSKNLVCG KNVLIDMSVH TAYVNAIRGA QHFIYIENQY FLGSSFNWDS HRDVGANNLI PIEIALKIAN KIYSNERFSA YIVVPMWPEG
601: NPTGTPTQRI LYWQKMTMQM MYEIIYKALK EVGLDGTYEP QDYLNFFCLG NREAEDTTCT SSGPFSASNP QDQARKNRRF MVYVHSKGMI VDDEYVIIGS
701: ANINQRSMEG TRDTEIAMAA YQPQHTWANM LSAPRGQIFG YRMSLWAEHI GAIEESFTRP ESLECTRQVR HIGQQNWEKF ISSHVTEMKG HLLKYPVSID
801: SRGKVNPLSG CATFPDLGGN ICGSFLNIQE NLTI

Best Arabidopsis Sequence Match ( AT2G42010.1 )
(BLAST)

0001: MDNHGPRYPY PYGQYPYPYP YPAPYRPPSS EPYPPPPTNQ YSAPYYPYPP PPYATPPPYA SPPPPHQHTS GSHSGPLDYS HNPQPSSLAA APPEYHRHSF
0101: DYQPSPYPYQ PQGNFGAYGP PPPHYSYQEP AQYPPPETKP QEPLPPPQQT QGFQEYRRQD CLSTGGTGHD NVSNSGSSYP PVDELLGGLH ISTNQPGPSV
0201: PQLSSLPSNS WQSRPGDLYG YPNSSFPSNS HLPQLGRVDS SSSYYASTES PHSADMQMTL FGKGSLKVLL LHGNLDIWIY HAKNLPNMDM FHKTLGDMFG
0301: RLPGKIEGQL TSKITSDPYV SVSVAGAVIG RTYVMSNSEN PVWMQHFYVP VAHHAAEVHF VVKDSDVVGS QLIGLVTIPV EQIYSGAKIE GTYPILNSNG
0401: KPCKPGANLS LSIQYTPMDK LSVYHHGVGA GPDYQGVPGT YFPLRKGGTV RLYQDAHVPE GMLPGIRLDN GMSYEHGKCW HDMFDAIRQA RRLIYITGWS
0501: VWHKVKLIRD KLGPASECTL GELLRSKSQE GVRVLLLIWD DPTSRSILGY KTDGVMATHD EETRRFFKHS SVQVLLCPRN AGKRHSWVKQ REVGTIYTHH
0601: QKNVIVDADA GGNRRKIIAF VGGLDLCDGR YDTPQHPLFR TLQTIHKDDF HNPTFTGNLS GCPREPWHDL HSKIDGPAAY DVLTNFEERW LKAAKPSGIK
0701: KFKTSYDDAL LRIDRIPDIL GVSDTPTVSE NDPEAWHVQI FRSIDSNSVK GFPKDPKDAT CKNLVCGKNV LIDMSIHTAY VKAIRAAQHF IYIENQYFIG
0801: SSYNWNAHKD IGANNLIPME IALKIAEKIR ANERFAAYIV IPMWPEGVPT GAATQRILYW QHKTIQMMYE TIYKALVETG LEGAFSPQDY LNFFCLGNRE
0901: MVDGIDNSGT GSPSNANTPQ ALSRKSRRFM VYVHSKGMVV DDEYVVIGSA NINQRSMEGT RDTEIAMGAY QPQHTWARKH SGPRGQIYGY RMSLWAEHMA
1001: TLDDCFTQPE SIECVRKVRT MGERNWKQFA AEEVSDMRGH LLKYPVEVDR KGKVRPLPGS ETFPDVGGNI VGSFIAIQEN LTI

Arabidopsis Description

PLDBETA1phospholipase D beta 1 [Source:TAIR;Acc:AT2G42010]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.