Factsheet for GSMUA_Achr8P12030_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
vacuole 1
cytosol 3

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr9P09250_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G11850.1	GSMUA_Achr9P09250_001	AT4G26630.1	25387881

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400026602	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, vacuole	28.61	75.16
PGSC0003DMT400000378	Potato	cytosol	24.38	74.81
CDY41006	Canola	mitochondrion	14.18	73.08
TraesCS1D01G189300.1	Wheat	cytosol	72.26	71.73
TraesCS1B01G195200.1	Wheat	cytosol	72.14	71.6
Bra022740.1-P	Field mustard	cytosol, extracellular	10.95	69.84
CDY28756	Canola	cytosol, extracellular	10.95	69.84
CDY13283	Canola	mitochondrion	30.6	69.69
KRG89825	Soybean	cytoskeleton, cytosol, peroxisome	24.63	68.04
GSMUA_Achr5P20150_001	Banana	cytosol	84.33	68.0
Bra000752.1-P	Field mustard	cytosol, nucleus, peroxisome	44.15	67.49
Zm00001d050470_P001	Maize	mitochondrion	33.21	67.09
KXG40331	Sorghum	cytosol	68.91	67.07
GSMUA_Achr4P24890_001	Banana	cytosol, plastid	73.38	66.67
TraesCS1D01G370600.1	Wheat	cytosol	68.41	66.43
TraesCS1A01G365100.2	Wheat	mitochondrion	68.41	66.43
TraesCS1B01G382600.1	Wheat	mitochondrion	68.41	66.43
Os03t0119100-01	Rice	plasma membrane	68.66	66.11
Zm00001d027386_P002	Maize	cytosol	68.53	66.07
VIT_02s0025g04620.t01	Wine grape	cytosol	69.4	65.65
HORVU1Hr1G079150.1	Barley	cytosol	67.29	65.34
HORVU4Hr1G085550.2	Barley	cytosol	66.79	64.62
TraesCS5A01G520900.1	Wheat	cytosol	66.54	64.38
TraesCS4D01G346700.1	Wheat	cytosol	66.54	64.38
PGSC0003DMT400058531	Potato	plastid	66.92	63.37
Solyc08g080130.2.1	Tomato	nucleus	66.54	63.24
CDX86742	Canola	cytosol	66.04	62.69
Bra014871.1-P	Field mustard	cytosol	65.92	62.57
TraesCS4B01G352300.1	Wheat	cytosol	66.42	62.31
AT4G11850.1	Thale cress	cytosol	66.29	62.12
KRH77467	Soybean	nucleus	65.67	61.9
Solyc01g091910.2.1	Tomato	plastid	68.16	61.23
KRG93706	Soybean	nucleus	22.14	61.17
AT4G00240.1	Thale cress	cytosol	69.9	60.63
AT4G11830.2	Thale cress	cytosol	64.43	60.51
AT4G11840.1	Thale cress	cytosol	65.17	60.51
CDY64184	Canola	mitochondrion	61.32	60.49
CDX90807	Canola	cytosol	60.32	60.1
KRH77469	Soybean	nucleus	5.22	60.0
CDX90066	Canola	cytosol	71.02	58.62
Zm00001d015818_P002	Maize	cytosol, nucleus, peroxisome	20.15	58.48
Bra000753.1-P	Field mustard	cytosol	56.47	57.18
GSMUA_Achr9P21120_001	Banana	nucleus	17.91	57.14
Zm00001d015256_P001	Maize	cytosol	29.35	57.0
KRH77470	Soybean	cytosol	9.7	56.93
CDX90808	Canola	cytosol	56.09	56.8
Zm00001d029684_P001	Maize	peroxisome	73.88	56.68
EER92041	Sorghum	cytosol, nucleus, peroxisome	74.13	56.6
CDY52961	Canola	cytosol, nucleus, peroxisome	69.53	56.35
CDY54926	Canola	cytosol, nucleus, peroxisome	69.53	55.73
KRH65182	Soybean	cytosol	52.49	55.6
Os10t0524400-01	Rice	plasma membrane	72.26	55.54
KRH48290	Soybean	nucleus	70.65	54.25
GSMUA_Achr7P23470_001	Banana	cytosol	52.86	54.0
CDY15144	Canola	peroxisome	71.39	53.95
CDY13284	Canola	cytosol	30.72	53.81
GSMUA_Achr10P...	Banana	cytosol, nucleus, peroxisome	11.57	53.76
Bra033225.1-P	Field mustard	cytosol	71.52	53.74
HORVU1Hr1G048970.1	Barley	cytosol, nucleus, peroxisome	73.88	53.56
TraesCS1A01G187400.1	Wheat	peroxisome	73.51	53.39
GSMUA_Achr1P14920_001	Banana	plastid	52.49	53.15
VIT_15s0048g01160.t01	Wine grape	cytosol	70.4	52.07
AT2G42010.2	Thale cress	peroxisome	71.52	51.9
KRH01625	Soybean	cytosol	70.4	51.6
CDY46254	Canola	cytosol	6.22	51.55
GSMUA_Achr1P07360_001	Banana	cytosol	46.77	51.37
KRH70487	Soybean	cytosol	70.02	50.9
GSMUA_AchrUn_...	Banana	cytosol	53.86	50.47
Solyc10g017650.1.1	Tomato	cytosol	69.03	49.6
GSMUA_Achr11P...	Banana	cytosol	50.12	48.44
GSMUA_Achr9P21110_001	Banana	mitochondrion	36.19	46.19
GSMUA_Achr10P...	Banana	cytosol, nucleus, peroxisome	21.89	44.11
GSMUA_Achr7P10170_001	Banana	cytosol	29.48	43.89
GSMUA_Achr1P14590_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	28.73	41.4
Bra008515.1-P	Field mustard	mitochondrion, plastid	69.65	38.62
GSMUA_Achr10P...	Banana	cytosol	14.3	37.7
GSMUA_Achr10P...	Banana	cytosol, plastid	19.78	34.79
GSMUA_Achr6P35870_001	Banana	plasma membrane	30.72	25.97
GSMUA_Achr2P00290_001	Banana	endoplasmic reticulum	11.69	25.13
GSMUA_Achr9P16530_001	Banana	cytosol, nucleus, peroxisome	21.14	16.08
GSMUA_Achr11P...	Banana	mitochondrion	3.11	14.2
GSMUA_Achr2P00270_001	Banana	cytosol, nucleus, peroxisome	11.94	11.82
GSMUA_Achr11P...	Banana	cytosol	1.49	5.04

Protein Annotations

KEGG:00564+3.1.4.4	KEGG:00565+3.1.4.4	Gene3D:2.60.40.150	Gene3D:3.30.870.10	MapMan:5.7.2.4.2	InterPro:C2_dom
InterPro:C2_domain_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0004630	GO:GO:0005488	GO:GO:0005509
GO:GO:0005575	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987
GO:GO:0016020	GO:GO:0016042	GO:GO:0016787	GO:GO:0046470	GO:GO:0070290	EnsemblPlantsGene:GSMUA_Achr8G12030_001
EnsemblPlants:GSMUA_Achr8P12030_001	EnsemblPlants:GSMUA_Achr8T12030_001	InterPro:IPR000008	InterPro:IPR001736	InterPro:IPR035892	UniProt:M0TPQ6
PFAM:PF00168	PFAM:PF00614	PFAM:PF12357	PIRSF:PIRSF036470	InterPro:PLipase_D/transphosphatidylase	InterPro:PLipase_D_C
InterPro:PLipase_D_fam	InterPro:PLipase_D_pln	PFscan:PS50004	PFscan:PS50035	PANTHER:PTHR18896	PANTHER:PTHR18896:SF65
SMART:SM00155	SMART:SM00239	SUPFAM:SSF49562	SUPFAM:SSF56024	UniParc:UPI000295B774	SEG:seg

Description

Phospholipase D beta 1 [Source:GMGC_GENE;Acc:GSMUA_Achr8G12030_001]

Coordinates

chr8:-:8765413..8775196

Molecular Weight (calculated)

90471.2 Da

IEP (calculated)

9.005

GRAVY (calculated)

-0.398

Length

804 amino acids

Sequence
(BLAST)

001: MSHPSMLSSP LNPPSPPPPR RSTPLTISSR TSASPISPPA RPRARFRRIT ARVLTVTSTS PPPPGQMTSI TSDPYVTITV SGAAIGRTYV LSNSENPVWM
101: QHFNVPVAHH AAEVQFVVKD SDVVGAQLIG VVSIPAEQIY SGQKVEGAYQ ILGVGAGPHY CGVPDTYFPL RKGGKVTLYQ DAHVPDGCLP DLRLGNGMHY
201: EHGKCWHDIF NAISQARRLI YIVGWSVFHT VQLVRGPDGL SFPILGDLLR SKSQEGVRVL LLVWDDPTSR NILGFRTNGV MGTRDEETRR FFKHSSVQVL
301: LCPRSAGKRH SIVKQQETGA IYTHHQKQVI VDADAGNGKR KIIAFVGGLD LCGGRYDTPK HSLFRTLQTL HKDDYYNPNF VNSDDSGPRE PWHDLHSKID
401: GPAAYDVLKN FEERWLKASK HHGIKKLKKS SDDALLIIEK IPDILRVDDL LFMNDNDPET WHVQIFRSID SNSVKGFPKD PRDAIKKNLV CGKNVLIDMS
501: IHRAYVHAIR AAQHFIYIEN QYFLGSSFNW DSNKDLGANN LIPIEIALKI ANKIRAKERF SAYIVIPMWP EGNPTGAPTQ RILFWQNKTM QMMYETIYTA
601: LKEVGLENTY EPQDYLNFFC LGNREVPDVN NSSRNAETSP QALAKKNRRF MIYVHSKGMI VDDEYVILGS ANINQRSLEG TRDTEIAMGA YQPQHTQGRR
701: LSSPRGQIFG YRMSLWAEHI GTIEECFNHP ESLECMRRVR DIGQFNWSQY VADEITEIRG HLLKYPVDVD RKGKVKPLPG HETFPDIGGK ICGSFFAIQE
801: NLTI

Best Arabidopsis Sequence Match ( AT2G42010.1 )
(BLAST)

0001: MDNHGPRYPY PYGQYPYPYP YPAPYRPPSS EPYPPPPTNQ YSAPYYPYPP PPYATPPPYA SPPPPHQHTS GSHSGPLDYS HNPQPSSLAA APPEYHRHSF
0101: DYQPSPYPYQ PQGNFGAYGP PPPHYSYQEP AQYPPPETKP QEPLPPPQQT QGFQEYRRQD CLSTGGTGHD NVSNSGSSYP PVDELLGGLH ISTNQPGPSV
0201: PQLSSLPSNS WQSRPGDLYG YPNSSFPSNS HLPQLGRVDS SSSYYASTES PHSADMQMTL FGKGSLKVLL LHGNLDIWIY HAKNLPNMDM FHKTLGDMFG
0301: RLPGKIEGQL TSKITSDPYV SVSVAGAVIG RTYVMSNSEN PVWMQHFYVP VAHHAAEVHF VVKDSDVVGS QLIGLVTIPV EQIYSGAKIE GTYPILNSNG
0401: KPCKPGANLS LSIQYTPMDK LSVYHHGVGA GPDYQGVPGT YFPLRKGGTV RLYQDAHVPE GMLPGIRLDN GMSYEHGKCW HDMFDAIRQA RRLIYITGWS
0501: VWHKVKLIRD KLGPASECTL GELLRSKSQE GVRVLLLIWD DPTSRSILGY KTDGVMATHD EETRRFFKHS SVQVLLCPRN AGKRHSWVKQ REVGTIYTHH
0601: QKNVIVDADA GGNRRKIIAF VGGLDLCDGR YDTPQHPLFR TLQTIHKDDF HNPTFTGNLS GCPREPWHDL HSKIDGPAAY DVLTNFEERW LKAAKPSGIK
0701: KFKTSYDDAL LRIDRIPDIL GVSDTPTVSE NDPEAWHVQI FRSIDSNSVK GFPKDPKDAT CKNLVCGKNV LIDMSIHTAY VKAIRAAQHF IYIENQYFIG
0801: SSYNWNAHKD IGANNLIPME IALKIAEKIR ANERFAAYIV IPMWPEGVPT GAATQRILYW QHKTIQMMYE TIYKALVETG LEGAFSPQDY LNFFCLGNRE
0901: MVDGIDNSGT GSPSNANTPQ ALSRKSRRFM VYVHSKGMVV DDEYVVIGSA NINQRSMEGT RDTEIAMGAY QPQHTWARKH SGPRGQIYGY RMSLWAEHMA
1001: TLDDCFTQPE SIECVRKVRT MGERNWKQFA AEEVSDMRGH LLKYPVEVDR KGKVRPLPGS ETFPDVGGNI VGSFIAIQEN LTI

Arabidopsis Description

PLDBETA1phospholipase D beta 1 [Source:TAIR;Acc:AT2G42010]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.