Factsheet for GSMUA_Achr1P14920_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
vacuole 1
mitochondrion 1
cytosol 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d006262_P001	Maize	cytoskeleton, cytosol, peroxisome	14.86	76.62
GSMUA_Achr9P21120_001	Banana	nucleus	22.17	69.84
GSMUA_Achr1P07360_001	Banana	cytosol	63.73	69.13
GSMUA_AchrUn_...	Banana	cytosol	73.8	68.3
Os09t0543100-02	Rice	plasma membrane	71.41	66.39
KXG36094	Sorghum	cytosol	70.78	65.42
PGSC0003DMT400009253	Potato	cytosol	21.41	65.13
PGSC0003DMT400025590	Potato	cytosol	66.12	64.73
TraesCS5A01G337100.2	Wheat	cytosol	70.03	64.5
Zm00001d006257_P009	Maize	cytosol	69.52	64.49
TraesCS5B01G336100.1	Wheat	cytosol	69.77	64.27
TraesCS5D01G341800.2	Wheat	cytosol	66.75	64.01
Solyc04g082000.2.1	Tomato	cytosol	66.5	62.93
GSMUA_Achr9P21110_001	Banana	mitochondrion	49.62	62.54
GSMUA_Achr7P23470_001	Banana	cytosol	61.46	62.01
KRH60977	Soybean	cytosol	66.0	61.87
KRH51648	Soybean	cytosol	65.24	61.16
HORVU5Hr1G084740.4	Barley	plastid	55.04	61.12
Zm00001d022594_P002	Maize	cytosol	67.88	60.9
KRH37270	Soybean	cytosol	20.15	60.84
KRH76589	Soybean	extracellular	65.87	60.53
VIT_00s0264g00100.t01	Wine grape	cytosol	66.37	60.37
KRH28860	Soybean	mitochondrion	65.37	59.93
VIT_18s0001g00770.t01	Wine grape	nucleus	66.0	59.89
GSMUA_Achr11P...	Banana	cytosol	62.47	59.62
Bra034939.1-P	Field mustard	cytosol	62.47	59.54
Solyc02g083340.2.1	Tomato	nucleus	64.61	59.24
AT4G35790.1	Thale cress	cytosol	63.98	58.53
Solyc02g061850.2.1	Tomato	cytosol	62.47	58.35
Bra017730.1-P	Field mustard	cytosol	61.08	57.81
CDX72557	Canola	cytosol	62.85	57.69
CDY47037	Canola	cytosol	63.6	57.06
CDY35793	Canola	cytosol	61.84	56.76
Bra010512.1-P	Field mustard	cytosol	56.42	55.51
CDY67335	Canola	cytosol	60.2	55.2
PGSC0003DMT400009250	Potato	cytosol	38.16	54.79
CDY41630	Canola	cytosol	59.7	54.67
CDX80734	Canola	cytosol	8.19	53.72
GSMUA_Achr8P12030_001	Banana	plastid	53.15	52.49
GSMUA_Achr10P...	Banana	cytosol, nucleus, peroxisome	10.96	50.29
GSMUA_Achr4P24890_001	Banana	cytosol, plastid	52.64	47.23
GSMUA_Achr7P10170_001	Banana	cytosol	30.48	44.81
GSMUA_Achr1P14590_001	Banana	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	30.86	43.91
GSMUA_Achr5P20150_001	Banana	cytosol	53.53	42.63
GSMUA_Achr10P...	Banana	cytosol, nucleus, peroxisome	21.03	41.85
CDY42882	Canola	nucleus	15.49	38.2
GSMUA_Achr10P...	Banana	cytosol	14.61	38.03
GSMUA_Achr10P...	Banana	cytosol, plastid	20.65	35.89
GSMUA_Achr6P35870_001	Banana	plasma membrane	31.61	26.39
GSMUA_Achr2P00290_001	Banana	endoplasmic reticulum	11.84	25.13
GSMUA_Achr9P16530_001	Banana	cytosol, nucleus, peroxisome	21.41	16.08
GSMUA_Achr11P...	Banana	mitochondrion	3.27	14.77
GSMUA_Achr2P00270_001	Banana	cytosol, nucleus, peroxisome	12.09	11.82
GSMUA_Achr11P...	Banana	cytosol	1.39	4.62

Protein Annotations

KEGG:00564+3.1.4.4	KEGG:00565+3.1.4.4	Gene3D:2.60.40.150	Gene3D:3.30.870.10	MapMan:50.3.1	InterPro:C2_dom
InterPro:C2_domain_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0004630	GO:GO:0005488	GO:GO:0005509
GO:GO:0005575	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987
GO:GO:0016020	GO:GO:0016042	GO:GO:0016787	GO:GO:0046470	GO:GO:0070290	EnsemblPlantsGene:GSMUA_Achr1G14920_001
EnsemblPlants:GSMUA_Achr1P14920_001	EnsemblPlants:GSMUA_Achr1T14920_001	InterPro:IPR000008	InterPro:IPR001736	InterPro:IPR035892	UniProt:M0S000
PFAM:PF00168	PFAM:PF00614	PFAM:PF12357	PFAM:PF13091	PIRSF:PIRSF036470	InterPro:PLD-like_dom
InterPro:PLipase_D/transphosphatidylase	InterPro:PLipase_D_C	InterPro:PLipase_D_fam	InterPro:PLipase_D_pln	PFscan:PS50004	PFscan:PS50035
PANTHER:PTHR18896	PANTHER:PTHR18896:SF86	SMART:SM00155	SMART:SM00239	SUPFAM:SSF49562	SUPFAM:SSF56024
UniParc:UPI0002951E5C	SEG:seg	:	:	:	:

Description

Phospholipase D delta [Source:GMGC_GENE;Acc:GSMUA_Achr1G14920_001]

Coordinates

chr1:+:11257172..11266039

Molecular Weight (calculated)

89627.6 Da

IEP (calculated)

7.289

GRAVY (calculated)

-0.388

Length

794 amino acids

Sequence
(BLAST)

001: MRLSSSTATS TCPCSRHAAS PTWTCSPSTS AAASPHAALS PPPTPASPPG ATVARTRVIH NSQNPIWNER FKIPVAHSAA ALVLHVKDND VFGSQLIGTV
101: SIPVARIASG ESVEHRHGIA GDPDKRGVSD AYFPVRKGCL VTLYQDAHVR DGELPEIRLE EGAIFEHNKC WEDICHAILE AHQLIYITGW SIYHKVKLVR
201: EPTRPLPTAG QLTLGELLKY KSQEGVRVCM LVWDDKTSHH NFFIKTEGVM QTHDEETRKF FKHSSVICVL APRYASSKLS FVKQQAFGTL FTHHQKCVLV
301: DTQASGNNRK ITAFIGGLDL CDGRYDTPEH RLFRELDSVF LNDFHNPTFA LETKGPRQPW HDLHCRIEGP AAYDVLENFE QHWCKATKWR EFGLRFKKKV
401: SHWHDDALIK LERISWIISP SPTVPNDDPS LWVASEEDAG PWHVQIFRSI DSGSVKGFPK NPQEALRKNL VCQKNLIIDK SIHTAYVRAI RSAQHFIYIE
501: NQYFLGSSYA WPFYKNSGAD NLIPMELALK IAGKIKAKER FAVYVVIPMW PEGVPTTSSV QEILFWQGQT MQMMYEIIAK ELKAVNFEDS HPQDYLNFYC
601: LGNREELSKD ELQSNGHSSE RSPPIPNHLS FVFTQKSRRF MIYVHAKGMI VDDEYVIMGS SNINQRSLAG SRDTEIAMGA YQPHQTWAEK ERHPHGQIYG
701: YRMSLWAEQL GSVDERFEQP DSLECVRLVN KIADDNWCRY AAKEVSSLTG HLLKYPIKVE ADGKVGALPD QQCFPDVGGK ILGDPTSLPD TLTM

Best Arabidopsis Sequence Match ( AT4G35790.2 )
(BLAST)

001: MAEKVSEDVM LLHGDLDLKI VKARRLPNMD MFSEHLRRLF TACNACARPT DTDDVDPRDK GEFGDKNIRS HRKVITSDPY VTVVVPQATL ARTRVLKNSQ
101: EPLWDEKFNI SIAHPFAYLE FQVKDDDVFG AQIIGTAKIP VRDIASGERI SGWFPVLGAS GKPPKAETAI FIDMKFTPFD QIHSYRCGIA GDPERRGVRR
201: TYFPVRKGSQ VRLYQDAHVM DGTLPAIGLD NGKVYEHGKC WEDICYAISE AHHMIYIVGW SIFHKIKLVR ETKVPRDKDM TLGELLKYKS QEGVRVLLLV
301: WDDKTSHDKF GIKTPGVMGT HDEETRKFFK HSSVICVLSP RYASSKLGLF KQQVVGTLFT HHQKCVLVDT QAVGNNRKVT AFIGGLDLCD GRYDTPEHRI
401: LHDLDTVFKD DFHNPTFPAG TKAPRQPWHD LHCRIDGPAA YDVLINFEQR WRKATRWKEF SLRLKGKTHW QDDALIRIGR ISWILSPVFK FLKDGTSIIP
501: EDDPCVWVSK EDDPENWHVQ IFRSIDSGSV KGFPKYEDEA EAQHLECAKR LVVDKSIQTA YIQTIRSAQH FIYIENQYFL GSSYAWPSYR DAGADNLIPM
601: ELALKIVSKI RAKERFAVYV VIPLWPEGDP KSGPVQEILY WQSQTMQMMY DVIAKELKAV QSDAHPLDYL NFYCLGKREQ LPDDMPATNG SVVSDSYNFQ
701: RFMIYVHAKG MIVDDEYVLM GSANINQRSM AGTKDTEIAM GAYQPNHTWA HKGRHPRGQV YGYRMSLWAE HLGKTGDEFV EPSDLECLKK VNTISEENWK
801: RFIDPKFSEL QGHLIKYPLQ VDVDGKVSPL PDYETFPDVG GKIIGAHSMA LPDTLTT

Arabidopsis Description

PLDDELTAPhospholipase D delta [Source:UniProtKB/Swiss-Prot;Acc:Q9C5Y0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.