CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
vacuole 1
peroxisome 1
plasma membrane 1
plastid 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX80734	Canola	cytosol	18.63	40.5
KRH51648	Soybean	cytosol	76.81	23.85
KRH60977	Soybean	cytosol	76.43	23.73
PGSC0003DMT400025590	Potato	cytosol	66.92	21.7
HORVU5Hr1G084740.4	Barley	plastid	58.56	21.54
Solyc04g082000.2.1	Tomato	cytosol	66.92	20.98
GSMUA_Achr1P14920_001	Banana	plastid	60.84	20.15
TraesCS5D01G341800.2	Wheat	cytosol	61.6	19.57
Bra034939.1-P	Field mustard	cytosol	61.6	19.45
VIT_18s0001g00770.t01	Wine grape	nucleus	64.64	19.43
KXG36094	Sorghum	cytosol	63.12	19.32
Os09t0543100-02	Rice	plasma membrane	61.98	19.09
TraesCS5A01G337100.2	Wheat	cytosol	61.98	18.91
Zm00001d006257_P009	Maize	cytosol	61.22	18.81
TraesCS5B01G336100.1	Wheat	cytosol	61.6	18.79
KRH59149	Soybean	cytosol	61.22	18.79
KRH43039	Soybean	cytosol	60.84	18.67
GSMUA_AchrUn_...	Banana	cytosol	60.84	18.65
KRH28860	Soybean	mitochondrion	60.84	18.48
KRH76589	Soybean	extracellular	60.46	18.4
GSMUA_Achr11P...	Banana	cytosol	56.27	17.79
GSMUA_Achr1P07360_001	Banana	cytosol	49.43	17.76
KRH61774	Soybean	cytosol	23.19	17.48
KRG93706	Soybean	nucleus	19.01	17.18
Zm00001d022594_P002	Maize	cytosol	53.61	15.93
KRH77467	Soybean	nucleus	48.67	15.01
OQU84227	Sorghum	cytosol	48.67	13.93
Zm00001d015033_P001	Maize	extracellular, plastid, vacuole	48.67	13.75
HORVU6Hr1G012780.6	Barley	cytosol, nucleus, plastid	42.97	13.0
KRH65182	Soybean	cytosol	37.26	12.91
KRH47460	Soybean	cytosol	39.54	12.86
KRH09736	Soybean	cytosol, endoplasmic reticulum, nucleus	34.6	12.8
TraesCS6B01G096200.1	Wheat	cytosol	41.83	12.72
KRH52443	Soybean	cytosol	39.54	12.59
KRH48290	Soybean	nucleus	49.81	12.51
TraesCS6A01G071700.1	Wheat	cytosol, nucleus, plastid	41.06	12.43
KRH16190	Soybean	cytosol	5.32	12.17
KRH23570	Soybean	endoplasmic reticulum	36.88	12.02
KRH44445	Soybean	cytosol	35.36	11.8
KRH01625	Soybean	cytosol	48.29	11.58
KRH70487	Soybean	cytosol	48.29	11.48
KRH10002	Soybean	cytosol	31.94	11.07
KRH52444	Soybean	cytosol, plastid	33.84	10.84
KRH44164	Soybean	cytosol	30.42	10.31
KRH47139	Soybean	cytosol	30.04	10.27
KRH23329	Soybean	cytosol	9.89	9.81
Os02t0120200-01	Rice	extracellular	31.94	9.23
KRH09735	Soybean	cytosol	14.83	8.41
KRH05308	Soybean	endoplasmic reticulum	6.08	8.12
Zm00001d006262_P001	Maize	cytoskeleton, cytosol, peroxisome	3.04	5.19
KRH12101	Soybean	plastid	20.91	4.9
KRH37058	Soybean	plastid	20.91	4.88
GSMUA_Achr9P21120_001	Banana	nucleus	4.56	4.76
KRG92923	Soybean	cytosol, nucleus, peroxisome	18.25	4.29
KRH77470	Soybean	cytosol	1.9	3.65
KRG89825	Soybean	cytoskeleton, cytosol, peroxisome	3.04	2.75
KRH77469	Soybean	nucleus	0.0	0.0
KRH76243	Soybean	cytosol	0.0	0.0

Protein Annotations

EMBL:ACUP02005435	EnsemblPlants:KRH37270	EnsemblPlantsGene:GLYMA_09G055300	GO:GO:0003674	GO:GO:0003824	InterPro:IPR001736
InterPro:PLipase_D/transphosphatidylase	InterPro:PLipase_D_fam	KEGG:00564+3.1.4.4	KEGG:00565+3.1.4.4	MetaCyc:PWY-3561	MetaCyc:PWY-7039
PANTHER:PTHR18896	PANTHER:PTHR18896:SF112	PFAM:PF00614	ProteinID:KRH37270	ProteinID:KRH37270.1	SUPFAM:SSF56024
UniParc:UPI0002948CF6	UniProt:K7LBY7	MapMan:35.1	:	:	:

Description

hypothetical protein

Coordinates

chr9:+:4933793..4935366

Molecular Weight (calculated)

30885.7 Da

IEP (calculated)

6.825

GRAVY (calculated)

-0.313

Length

263 amino acids

Sequence
(BLAST)

001: MYRSRTQTDP DRFVVQDSYF PVWHGGSVML YQEAHVPDSM LSEVELEDWV VFEHGKCWED ICHAILEAHD LVYIVDWSIY HKVKLVREPT KPLPSSEGLQ
101: VLLLVWDDKT SHSKFGINTS GVMQTHDEET RKFFKHSSVR CLRSPRYASS KLSIFKQQAC FMLWFSSFPR FCHFFSVVGT LFTHHQKCVI VDTQAHGNNR
201: KITTFIGGLV LCDGRYDTLE HRILRDIDTV YQDDYHKGRE NSGFGWREWL WKIHCDITFA EVL

Best Arabidopsis Sequence Match ( AT2G42010.1 )
(BLAST)

0001: MDNHGPRYPY PYGQYPYPYP YPAPYRPPSS EPYPPPPTNQ YSAPYYPYPP PPYATPPPYA SPPPPHQHTS GSHSGPLDYS HNPQPSSLAA APPEYHRHSF
0101: DYQPSPYPYQ PQGNFGAYGP PPPHYSYQEP AQYPPPETKP QEPLPPPQQT QGFQEYRRQD CLSTGGTGHD NVSNSGSSYP PVDELLGGLH ISTNQPGPSV
0201: PQLSSLPSNS WQSRPGDLYG YPNSSFPSNS HLPQLGRVDS SSSYYASTES PHSADMQMTL FGKGSLKVLL LHGNLDIWIY HAKNLPNMDM FHKTLGDMFG
0301: RLPGKIEGQL TSKITSDPYV SVSVAGAVIG RTYVMSNSEN PVWMQHFYVP VAHHAAEVHF VVKDSDVVGS QLIGLVTIPV EQIYSGAKIE GTYPILNSNG
0401: KPCKPGANLS LSIQYTPMDK LSVYHHGVGA GPDYQGVPGT YFPLRKGGTV RLYQDAHVPE GMLPGIRLDN GMSYEHGKCW HDMFDAIRQA RRLIYITGWS
0501: VWHKVKLIRD KLGPASECTL GELLRSKSQE GVRVLLLIWD DPTSRSILGY KTDGVMATHD EETRRFFKHS SVQVLLCPRN AGKRHSWVKQ REVGTIYTHH
0601: QKNVIVDADA GGNRRKIIAF VGGLDLCDGR YDTPQHPLFR TLQTIHKDDF HNPTFTGNLS GCPREPWHDL HSKIDGPAAY DVLTNFEERW LKAAKPSGIK
0701: KFKTSYDDAL LRIDRIPDIL GVSDTPTVSE NDPEAWHVQI FRSIDSNSVK GFPKDPKDAT CKNLVCGKNV LIDMSIHTAY VKAIRAAQHF IYIENQYFIG
0801: SSYNWNAHKD IGANNLIPME IALKIAEKIR ANERFAAYIV IPMWPEGVPT GAATQRILYW QHKTIQMMYE TIYKALVETG LEGAFSPQDY LNFFCLGNRE
0901: MVDGIDNSGT GSPSNANTPQ ALSRKSRRFM VYVHSKGMVV DDEYVVIGSA NINQRSMEGT RDTEIAMGAY QPQHTWARKH SGPRGQIYGY RMSLWAEHMA
1001: TLDDCFTQPE SIECVRKVRT MGERNWKQFA AEEVSDMRGH LLKYPVEVDR KGKVRPLPGS ETFPDVGGNI VGSFIAIQEN LTI

Arabidopsis Description

PLDBETA1phospholipase D beta 1 [Source:TAIR;Acc:AT2G42010]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.