Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G11850.1 | KRG98502 | AT4G26630.1 | 25387881 |
| AT4G11850.1 | KRG98507 | AT4G26630.1 | 25387881 |
| AT4G11850.1 | KRH46360 | AT4G26630.1 | 25387881 |
| AT4G11850.1 | KRH46364 | AT4G26630.1 | 25387881 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH76243 | Soybean | cytosol | 42.86 | 36.59 |
| KRG93706 | Soybean | nucleus | 88.57 | 21.31 |
| Zm00001d050470_P001 | Maize | mitochondrion | 54.29 | 9.55 |
| Zm00001d015256_P001 | Maize | cytosol | 54.29 | 9.18 |
| Bra000752.1-P | Field mustard | cytosol, nucleus, peroxisome | 58.57 | 7.79 |
| KRH77467 | Soybean | nucleus | 91.43 | 7.5 |
| Solyc08g080130.2.1 | Tomato | nucleus | 71.43 | 5.91 |
| PGSC0003DMT400058531 | Potato | plastid | 70.0 | 5.77 |
| VIT_02s0025g04620.t01 | Wine grape | cytosol | 65.71 | 5.41 |
| CDX90807 | Canola | cytosol | 61.43 | 5.33 |
| AT4G11850.1 | Thale cress | cytosol | 64.29 | 5.24 |
| GSMUA_Achr8P12030_001 | Banana | plastid | 60.0 | 5.22 |
| TraesCS1D01G189300.1 | Wheat | cytosol | 60.0 | 5.19 |
| TraesCS1B01G195200.1 | Wheat | cytosol | 60.0 | 5.19 |
| CDX90808 | Canola | cytosol | 58.57 | 5.16 |
| Bra000753.1-P | Field mustard | cytosol | 58.57 | 5.16 |
| TraesCS1D01G370600.1 | Wheat | cytosol | 58.57 | 4.95 |
| TraesCS1B01G382600.1 | Wheat | mitochondrion | 58.57 | 4.95 |
| AT4G11830.2 | Thale cress | cytosol | 60.0 | 4.91 |
| KXG40331 | Sorghum | cytosol | 57.14 | 4.84 |
| CDX86742 | Canola | cytosol | 58.57 | 4.84 |
| Bra014871.1-P | Field mustard | cytosol | 58.57 | 4.84 |
| TraesCS1A01G365100.2 | Wheat | mitochondrion | 57.14 | 4.83 |
| Zm00001d027386_P002 | Maize | cytosol | 57.14 | 4.8 |
| CDY64184 | Canola | mitochondrion | 55.71 | 4.79 |
| AT4G11840.1 | Thale cress | cytosol | 58.57 | 4.73 |
| Os03t0119100-01 | Rice | plasma membrane | 55.71 | 4.67 |
| GSMUA_Achr4P24890_001 | Banana | cytosol, plastid | 58.57 | 4.63 |
| KRH65182 | Soybean | cytosol | 50.0 | 4.61 |
| HORVU1Hr1G079150.1 | Barley | cytosol | 54.29 | 4.59 |
| KRH48290 | Soybean | nucleus | 65.71 | 4.39 |
| HORVU4Hr1G085550.2 | Barley | cytosol | 51.43 | 4.33 |
| KRH59149 | Soybean | cytosol | 52.86 | 4.32 |
| KRH43039 | Soybean | cytosol | 52.86 | 4.32 |
| GSMUA_Achr5P20150_001 | Banana | cytosol | 61.43 | 4.31 |
| KRH60977 | Soybean | cytosol | 50.0 | 4.13 |
| KRH51648 | Soybean | cytosol | 50.0 | 4.13 |
| TraesCS4D01G346700.1 | Wheat | cytosol | 48.57 | 4.09 |
| KRH76589 | Soybean | extracellular | 50.0 | 4.05 |
| KRH28860 | Soybean | mitochondrion | 50.0 | 4.04 |
| KRH01625 | Soybean | cytosol | 62.86 | 4.01 |
| KRH70487 | Soybean | cytosol | 62.86 | 3.98 |
| TraesCS5A01G520900.1 | Wheat | cytosol | 47.14 | 3.97 |
| TraesCS4B01G352300.1 | Wheat | cytosol | 48.57 | 3.97 |
| EER92041 | Sorghum | cytosol, nucleus, peroxisome | 57.14 | 3.8 |
| TraesCS1A01G187400.1 | Wheat | peroxisome | 60.0 | 3.79 |
| Os10t0524400-01 | Rice | plasma membrane | 55.71 | 3.73 |
| Zm00001d029684_P001 | Maize | peroxisome | 55.71 | 3.72 |
| CDY13284 | Canola | cytosol | 24.29 | 3.7 |
| HORVU1Hr1G048970.1 | Barley | cytosol, nucleus, peroxisome | 58.57 | 3.7 |
| KRH61774 | Soybean | cytosol | 17.14 | 3.44 |
| KRH23570 | Soybean | endoplasmic reticulum | 35.71 | 3.1 |
| KRH09736 | Soybean | cytosol, endoplasmic reticulum, nucleus | 31.43 | 3.09 |
| KRH47460 | Soybean | cytosol | 35.71 | 3.09 |
| KRH44445 | Soybean | cytosol | 34.29 | 3.05 |
| KRH10002 | Soybean | cytosol | 31.43 | 2.9 |
| KRH47139 | Soybean | cytosol | 31.43 | 2.86 |
| KRH44164 | Soybean | cytosol | 31.43 | 2.84 |
| KRH52444 | Soybean | cytosol, plastid | 31.43 | 2.68 |
| KRH52443 | Soybean | cytosol | 27.14 | 2.3 |
| Zm00001d015818_P002 | Maize | cytosol, nucleus, peroxisome | 8.57 | 2.17 |
| KRG92923 | Soybean | cytosol, nucleus, peroxisome | 31.43 | 1.96 |
| KRH12101 | Soybean | plastid | 30.0 | 1.87 |
| KRH37058 | Soybean | plastid | 30.0 | 1.87 |
| KRH09735 | Soybean | cytosol | 1.43 | 0.22 |
| CDY28756 | Canola | cytosol, extracellular | 0.0 | 0.0 |
| CDY13283 | Canola | mitochondrion | 0.0 | 0.0 |
| Bra022740.1-P | Field mustard | cytosol, extracellular | 0.0 | 0.0 |
| CDY41006 | Canola | mitochondrion | 0.0 | 0.0 |
| CDY46254 | Canola | cytosol | 0.0 | 0.0 |
| KRH77470 | Soybean | cytosol | 0.0 | 0.0 |
| KRG89825 | Soybean | cytoskeleton, cytosol, peroxisome | 0.0 | 0.0 |
| KRH37270 | Soybean | cytosol | 0.0 | 0.0 |
| KRH23329 | Soybean | cytosol | 0.0 | 0.0 |
| KRH16190 | Soybean | cytosol | 0.0 | 0.0 |
| KRH05308 | Soybean | endoplasmic reticulum | 0.0 | 0.0 |
Protein Annotations
| KEGG:00564+3.1.4.4 | KEGG:00565+3.1.4.4 | Gene3D:3.30.870.10 | MapMan:35.1 | UniProt:A0A0R0LE97 | EMBL:ACUP02000673 |
| EnsemblPlantsGene:GLYMA_01G215200 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 | GO:GO:0005488 |
| GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016787 | GO:GO:0016887 | GO:GO:0042626 | EnsemblPlants:KRH77469 | ProteinID:KRH77469 | ProteinID:KRH77469.1 |
| InterPro:PLipase_D_fam | PANTHER:PTHR18896 | PANTHER:PTHR18896:SF84 | MetaCyc:PWY-3561 | MetaCyc:PWY-7039 | SUPFAM:SSF56024 |
| UniParc:UPI0006ED639D | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr1:+:54590283..54590793
Molecular Weight (calculated)
8408.1 Da
IEP (calculated)
8.258
GRAVY (calculated)
-0.827
Length
70 amino acids
Sequence
(BLAST)
(BLAST)
1: MKEKGSVTYC PRQPWHDLHS QVDGPAAYDI LTNFEERWLR ALKMHRFQKM KSSHDDSLLK IDRIPDICWH
001: MLSKKITSDP YVSISVAGAV IGRTYVISNS ENPVWQQHFY VPVAHHAAEV HFVVKDSDAV GSQLIGIVTI PVEQIYSGAR IEGTYSIRDS NGKPCKPGAT
101: LSLSIQYTSM NKLSVYHSGV GAGPYYQGVP GTYFPLREGG SVTLYQDAHV PEGMLPGIKL GNGMCYEHGK CWHDMFHAIC QARRLIYITG WSVWHNVRLV
201: RDKEDPSSEC RLGELLRSKS QEGVRVLLLV WDDPTSQNIL GYMTDGVMGT HDEETRRFFK DSSVQVLLCP RNAGKRHSWV KQREVGTIYT HHQKNLIVDA
301: DAGGNRRKIV AFVGGLDLCD GRYDTPQHPL FRTLQTDHNG DYHNPTFTGN VSGCPREPWH DLHSKIDGPA AYDVLTNFEE RWLKAAKPHR INKLKTSYDD
401: ALLRIDRIPD ILRVLDAPTV SANDPEAWHV QIFRSIDSNS VKGFPKDPKY ATSKNLVCGK NVLIDMSIHT AYVKAIRAAQ HFIYIENQYF IGSSYDWNAH
501: KDIGANNLIP MEIALKIADK IRAKERFAAY IVIPMWPEGV PTGAATQRIL YWQHKTMQMM YGTIYNALVE AGLEDEYSPQ DYLNFFCLGN REMVNGNNES
601: GTGSASNENT PQGLCRKSRR FMIYVHSKGM VVDDEYVVIG SANINQRSME GTRDTEIAMG AYQPQHTWAR RQSGPRGQIY GYRMSLWAEH MALLDDCFVE
701: PESLGCVRKV RTVAEENWEQ FRSEEVSEMR GHLMKYPVEV DRKGKVRPLP GSEEFPDVGG NVVGSFLAIQ ENLTI
101: LSLSIQYTSM NKLSVYHSGV GAGPYYQGVP GTYFPLREGG SVTLYQDAHV PEGMLPGIKL GNGMCYEHGK CWHDMFHAIC QARRLIYITG WSVWHNVRLV
201: RDKEDPSSEC RLGELLRSKS QEGVRVLLLV WDDPTSQNIL GYMTDGVMGT HDEETRRFFK DSSVQVLLCP RNAGKRHSWV KQREVGTIYT HHQKNLIVDA
301: DAGGNRRKIV AFVGGLDLCD GRYDTPQHPL FRTLQTDHNG DYHNPTFTGN VSGCPREPWH DLHSKIDGPA AYDVLTNFEE RWLKAAKPHR INKLKTSYDD
401: ALLRIDRIPD ILRVLDAPTV SANDPEAWHV QIFRSIDSNS VKGFPKDPKY ATSKNLVCGK NVLIDMSIHT AYVKAIRAAQ HFIYIENQYF IGSSYDWNAH
501: KDIGANNLIP MEIALKIADK IRAKERFAAY IVIPMWPEGV PTGAATQRIL YWQHKTMQMM YGTIYNALVE AGLEDEYSPQ DYLNFFCLGN REMVNGNNES
601: GTGSASNENT PQGLCRKSRR FMIYVHSKGM VVDDEYVVIG SANINQRSME GTRDTEIAMG AYQPQHTWAR RQSGPRGQIY GYRMSLWAEH MALLDDCFVE
701: PESLGCVRKV RTVAEENWEQ FRSEEVSEMR GHLMKYPVEV DRKGKVRPLP GSEEFPDVGG NVVGSFLAIQ ENLTI
Arabidopsis Description
PLDBETA2Phospholipase D beta 2 [Source:UniProtKB/Swiss-Prot;Acc:O23078]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.