Subcellular Localization
min:
: max
Winner_takes_all: extracellular, cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- vacuole 2
- mitochondrion 3
- cytosol 2
- extracellular 2
- endoplasmic reticulum 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G11850.1 | CDX89318 | AT4G26630.1 | 25387881 |
| AT4G11850.1 | CDX94304 | AT4G26630.1 | 25387881 |
| AT4G11850.1 | CDX97358 | AT4G26630.1 | 25387881 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra022740.1-P | Field mustard | cytosol, extracellular | 100.0 | 100.0 |
| CDY41006 | Canola | mitochondrion | 85.71 | 69.23 |
| CDY51545 | Canola | cytosol | 50.0 | 44.06 |
| CDY13283 | Canola | mitochondrion | 86.51 | 30.88 |
| Zm00001d015818_P002 | Maize | cytosol, nucleus, peroxisome | 47.62 | 21.66 |
| KRH77470 | Soybean | cytosol | 15.87 | 14.6 |
| CDX86742 | Canola | cytosol | 86.51 | 12.87 |
| Zm00001d015256_P001 | Maize | cytosol | 40.48 | 12.32 |
| AT4G11840.1 | Thale cress | cytosol | 84.13 | 12.24 |
| AT4G11850.1 | Thale cress | cytosol | 83.33 | 12.24 |
| AT4G11830.2 | Thale cress | cytosol | 81.75 | 12.03 |
| CDX90807 | Canola | cytosol | 75.4 | 11.77 |
| CDX90808 | Canola | cytosol | 73.81 | 11.71 |
| GSMUA_Achr8P12030_001 | Banana | plastid | 69.84 | 10.95 |
| CDY64184 | Canola | mitochondrion | 70.63 | 10.92 |
| TraesCS1D01G189300.1 | Wheat | cytosol | 68.25 | 10.62 |
| Os03t0119100-01 | Rice | plasma membrane | 69.84 | 10.54 |
| Solyc08g080130.2.1 | Tomato | nucleus | 70.63 | 10.52 |
| TraesCS1B01G195200.1 | Wheat | cytosol | 67.46 | 10.49 |
| PGSC0003DMT400058531 | Potato | plastid | 70.63 | 10.48 |
| VIT_02s0025g04620.t01 | Wine grape | cytosol | 70.63 | 10.47 |
| KXG40331 | Sorghum | cytosol | 68.25 | 10.41 |
| Zm00001d027386_P002 | Maize | cytosol | 68.25 | 10.31 |
| HORVU4Hr1G085550.2 | Barley | cytosol | 67.46 | 10.23 |
| TraesCS5A01G520900.1 | Wheat | cytosol | 66.67 | 10.11 |
| GSMUA_Achr4P24890_001 | Banana | cytosol, plastid | 70.63 | 10.06 |
| TraesCS4D01G346700.1 | Wheat | cytosol | 65.87 | 9.99 |
| KRH77467 | Soybean | nucleus | 67.46 | 9.96 |
| TraesCS1A01G365100.2 | Wheat | mitochondrion | 64.29 | 9.78 |
| TraesCS1B01G382600.1 | Wheat | mitochondrion | 64.29 | 9.78 |
| TraesCS1D01G370600.1 | Wheat | cytosol | 64.29 | 9.78 |
| HORVU1Hr1G079150.1 | Barley | cytosol | 64.29 | 9.78 |
| TraesCS4B01G352300.1 | Wheat | cytosol | 65.87 | 9.68 |
| CDX90066 | Canola | cytosol | 69.05 | 8.93 |
| GSMUA_Achr5P20150_001 | Banana | cytosol | 69.05 | 8.73 |
| CDX88175 | Canola | cytosol | 50.79 | 8.64 |
| KRG93706 | Soybean | nucleus | 19.84 | 8.59 |
| CDY52961 | Canola | cytosol, nucleus, peroxisome | 67.46 | 8.57 |
| CDY54926 | Canola | cytosol, nucleus, peroxisome | 67.46 | 8.47 |
| Os10t0524400-01 | Rice | plasma membrane | 69.84 | 8.41 |
| CDY35793 | Canola | cytosol | 57.14 | 8.32 |
| CDX80505 | Canola | cytosol | 50.79 | 8.21 |
| CDY15144 | Canola | peroxisome | 69.05 | 8.18 |
| CDY41630 | Canola | cytosol | 55.56 | 8.07 |
| EER92041 | Sorghum | cytosol, nucleus, peroxisome | 67.46 | 8.07 |
| CDY24051 | Canola | cytosol | 48.41 | 8.05 |
| CDY33065 | Canola | cytosol | 48.41 | 8.05 |
| Zm00001d029684_P001 | Maize | peroxisome | 66.67 | 8.02 |
| CDX72557 | Canola | cytosol | 53.97 | 7.86 |
| TraesCS1A01G187400.1 | Wheat | peroxisome | 69.05 | 7.86 |
| CDY05351 | Canola | cytosol | 50.79 | 7.85 |
| CDY67335 | Canola | cytosol | 53.97 | 7.85 |
| CDY47037 | Canola | cytosol | 54.76 | 7.8 |
| HORVU1Hr1G048970.1 | Barley | cytosol, nucleus, peroxisome | 68.25 | 7.75 |
| CDY05490 | Canola | cytosol | 50.0 | 7.73 |
| CDY60551 | Canola | cytosol | 49.21 | 7.64 |
| Zm00001d050470_P001 | Maize | mitochondrion | 23.81 | 7.54 |
| CDY47540 | Canola | cytosol | 48.41 | 7.51 |
| CDY30108 | Canola | cytosol | 47.62 | 7.41 |
| CDX97705 | Canola | cytosol | 47.62 | 7.41 |
| CDY21865 | Canola | cytosol | 44.44 | 6.9 |
| CDX80734 | Canola | cytosol | 4.76 | 4.96 |
| CDY20149 | Canola | cytosol, nucleus, peroxisome | 6.35 | 3.76 |
| CDY70643 | Canola | cytosol, peroxisome | 5.56 | 3.29 |
| CDX92096 | Canola | nucleus | 26.19 | 3.05 |
| CDX95904 | Canola | cytosol, nucleus, peroxisome | 26.19 | 3.03 |
| CDY18811 | Canola | cytosol, nucleus, peroxisome | 24.6 | 2.96 |
| CDY42882 | Canola | nucleus | 7.14 | 2.8 |
| CDY46254 | Canola | cytosol | 1.59 | 2.06 |
| CDY20148 | Canola | cytosol, peroxisome, plastid | 3.97 | 1.25 |
| CDY13284 | Canola | cytosol | 0.0 | 0.0 |
| KRH77469 | Soybean | nucleus | 0.0 | 0.0 |
| CDX87920 | Canola | cytosol | 0.0 | 0.0 |
| CDY51604 | Canola | cytosol | 0.0 | 0.0 |
| CDY63527 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY28756 | EnsemblPlantsGene:GSBRNA2T00041399001 | Gene3D:3.30.870.10 | InterPro:PLipase_D_fam | KEGG:00564+3.1.4.4 | KEGG:00565+3.1.4.4 |
| MetaCyc:PWY-3561 | MetaCyc:PWY-7039 | PANTHER:PTHR18896 | PANTHER:PTHR18896:SF65 | ProteinID:CDY28756 | ProteinID:CDY28756.1 |
| SUPFAM:SSF56024 | UniParc:UPI0002546684 | UniProt:A0A078GTC9 | MapMan:35.1 | : | : |
Description
BnaA02g09480DBnaA02g09480D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GTC9]
Coordinates
chrLK032226:-:46947..47465
Molecular Weight (calculated)
14195.6 Da
IEP (calculated)
9.995
GRAVY (calculated)
0.187
Length
126 amino acids
Sequence
(BLAST)
(BLAST)
001: MSIHAAYVKA IRSAQHFIYI VNQYFLGSSI IQLGFKQGLG SFGIAGANNL IPIEIALKIA NKIRARGKFA AYIVIPMWPE GAPTSNPIQR ILYWQHKTMQ
101: MMYQTIHKAL VEVGLDGQYE PQDFII
101: MMYQTIHKAL VEVGLDGQYE PQDFII
001: MSMGGGSNHE FGQWLDQQLV PLATSSGSLM VELLHGRRIR KVDGEKSSKF TSDPYVTVSI SGAVIGRTFV ISNSENPVWM QHFDVPVAHS AAEVHFVVKD
101: NDPIGSKIIG VVGIPTKQLC SGNRIEGLFP ILNSSGKPCR KGAMLSLSIQ YTPMERMRLY QKGVGSGVEC VGVPGTYFPL RKGGRVTLYQ DAHVDDGTLP
201: SVHLDGGIQY RHGKCWEDMA DAIRRARRLI YITGWSVFHP VRLVRRNNDP TEGTLGELLK VKSQEGVRVL VLVWDDPTSM SFPGFSTKGL MNTSDEETRR
301: FFKHSSVQVL LCPRYGGKGH SFIKKSEVET IYTHHQKTMI VDAEAAQNRR KIVAFVGGLD LCNGRFDTPK HSLFGTLKTL HKDDFHNPNF VTTEDVGPRE
401: PWHDLHSKID GPAAYDVLAN FEERWMASKP RGIGKGRTSF DDSLLRINRI PDIMGLSEAS SANDNDPESW HVQVFRSIDS TSVKGFPKDP EEATGRNLLC
501: GKNILIDMSI HAAYVKAIRS AQHFIYIENQ YFLGSSFNWD SNKDLGANNL IPMEIALKIA NKIRARENFA AYIVIPMWPE GAPTSKPIQR ILYWQHKTMQ
601: MMYQTIYKAL LEVGLDGQLE PQDFLNFFCL GNREVGTREV PDGTVNVYNC PRKPPQPNAA QVQALKSRRF MIYVHSKGMV VDDEFVLIGS ANINQRSLEG
701: TRDTEIAMGG YQPHHSWAKK GSRPRGQIFG YRMSLWAEHL GFLEQEFEEP ENMECVRRVR QLSELNWGQY AAEEVTEMSG HLLKYPVQVD KTGKVSSLPG
801: CETFPDLGGK IIGSFLTLQE NLTI
101: NDPIGSKIIG VVGIPTKQLC SGNRIEGLFP ILNSSGKPCR KGAMLSLSIQ YTPMERMRLY QKGVGSGVEC VGVPGTYFPL RKGGRVTLYQ DAHVDDGTLP
201: SVHLDGGIQY RHGKCWEDMA DAIRRARRLI YITGWSVFHP VRLVRRNNDP TEGTLGELLK VKSQEGVRVL VLVWDDPTSM SFPGFSTKGL MNTSDEETRR
301: FFKHSSVQVL LCPRYGGKGH SFIKKSEVET IYTHHQKTMI VDAEAAQNRR KIVAFVGGLD LCNGRFDTPK HSLFGTLKTL HKDDFHNPNF VTTEDVGPRE
401: PWHDLHSKID GPAAYDVLAN FEERWMASKP RGIGKGRTSF DDSLLRINRI PDIMGLSEAS SANDNDPESW HVQVFRSIDS TSVKGFPKDP EEATGRNLLC
501: GKNILIDMSI HAAYVKAIRS AQHFIYIENQ YFLGSSFNWD SNKDLGANNL IPMEIALKIA NKIRARENFA AYIVIPMWPE GAPTSKPIQR ILYWQHKTMQ
601: MMYQTIYKAL LEVGLDGQLE PQDFLNFFCL GNREVGTREV PDGTVNVYNC PRKPPQPNAA QVQALKSRRF MIYVHSKGMV VDDEFVLIGS ANINQRSLEG
701: TRDTEIAMGG YQPHHSWAKK GSRPRGQIFG YRMSLWAEHL GFLEQEFEEP ENMECVRRVR QLSELNWGQY AAEEVTEMSG HLLKYPVQVD KTGKVSSLPG
801: CETFPDLGGK IIGSFLTLQE NLTI
Arabidopsis Description
PLDGAMMA2Phospholipase D gamma 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9T051]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.