CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

nucleus 2
peroxisome 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, peroxisome
Any Predictor:	nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY70643	Canola	cytosol, peroxisome	62.44	62.44
CDY46254	Canola	cytosol	16.9	37.11
GSMUA_Achr7P10170_001	Banana	cytosol	77.0	30.37
CDY13283	Canola	mitochondrion	47.42	28.61
Bra021132.1-P	Field mustard	cytosol	100.0	26.23
CDY21865	Canola	cytosol	98.12	25.74
KRH09735	Soybean	cytosol	53.52	24.57
AT3G15730.1	Thale cress	cytosol	92.96	24.44
CDX97705	Canola	cytosol	89.67	23.58
CDY30108	Canola	cytosol	89.67	23.58
CDY60551	Canola	cytosol	84.04	22.04
CDY47540	Canola	cytosol	84.04	22.04
PGSC0003DMT400073469	Potato	cytosol	80.75	21.26
Solyc06g068090.2.1	Tomato	plastid	80.75	21.26
GSMUA_Achr10P...	Banana	cytosol, plastid	45.54	21.23
VIT_09s0002g06760.t01	Wine grape	cytosol	80.75	21.18
KRH09736	Soybean	cytosol, endoplasmic reticulum, nucleus	69.01	20.68
CDY42882	Canola	nucleus	30.99	20.5
KXG31749	Sorghum	cytosol	77.46	20.32
HORVU3Hr1G024530.2	Barley	plastid	77.0	20.2
TraesCS3B01G149100.1	Wheat	unclear	77.0	20.2
TraesCS3A01G130000.1	Wheat	plastid	76.53	20.07
TraesCS3D01G130900.1	Wheat	golgi	76.53	20.07
PGSC0003DMT400001650	Potato	cytosol, plastid	75.59	19.85
Zm00001d039670_P004	Maize	cytosol	75.59	19.83
Zm00001d008727_P002	Maize	cytosol	75.59	19.83
EES17463	Sorghum	cytosol	75.12	19.68
Solyc03g116620.2.1	Tomato	plastid	74.18	19.48
Os01t0172400-03	Rice	plastid	74.18	19.46
TraesCS1D01G116700.1	Wheat	cytosol	70.89	18.53
CDX88175	Canola	cytosol	64.32	18.49
TraesCS1B01G135200.1	Wheat	cytosol	70.42	18.34
TraesCS1A01G115300.1	Wheat	cytosol	69.48	18.16
OQU77524	Sorghum	plastid	69.95	18.15
Os05t0171000-01	Rice	plasma membrane	69.48	17.96
HORVU1Hr1G025370.1	Barley	cytosol	70.42	17.54
CDX80505	Canola	cytosol	62.91	17.18
CDY05490	Canola	cytosol	63.85	16.69
CDY05351	Canola	cytosol	62.91	16.44
Zm00001d037643_P001	Maize	cytosol	69.48	16.34
CDY24051	Canola	cytosol	50.23	14.12
CDY33065	Canola	cytosol	50.23	14.12
CDY51545	Canola	cytosol	8.92	13.29
CDX90808	Canola	cytosol	45.07	12.09
CDY64184	Canola	mitochondrion	46.01	12.02
CDX86742	Canola	cytosol	47.42	11.92
CDX90807	Canola	cytosol	44.13	11.65
CDY35793	Canola	cytosol	45.07	11.1
CDY47037	Canola	cytosol	46.01	11.07
CDX72557	Canola	cytosol	44.6	10.98
CDY67335	Canola	cytosol	44.6	10.97
CDY41630	Canola	cytosol	44.6	10.96
CDX90066	Canola	cytosol	46.95	10.27
CDY52961	Canola	cytosol, nucleus, peroxisome	46.01	9.88
CDY54926	Canola	cytosol, nucleus, peroxisome	46.01	9.77
CDY15144	Canola	peroxisome	46.95	9.4
CDY28756	Canola	cytosol, extracellular	3.76	6.35
CDY18811	Canola	cytosol, nucleus, peroxisome	26.29	5.35
CDX92096	Canola	nucleus	25.82	5.08
CDX95904	Canola	cytosol, nucleus, peroxisome	25.35	4.96
CDY41006	Canola	mitochondrion	3.29	4.49
CDX80734	Canola	cytosol	1.41	2.48
CDY20148	Canola	cytosol, peroxisome, plastid	3.29	1.75
CDY51604	Canola	cytosol	0.94	0.71
CDX87920	Canola	cytosol	0.94	0.58
CDY13284	Canola	cytosol	0.47	0.22
CDY63527	Canola	cytosol	0.0	0.0

Protein Annotations

KEGG:00564+3.1.4.4	KEGG:00565+3.1.4.4	Gene3D:3.30.870.10	MapMan:50.3.1	GO:A0A078G428	UniProt:A0A078G428
EnsemblPlants:CDY20149	ProteinID:CDY20149	ProteinID:CDY20149.1	GO:GO:0003674	GO:GO:0003824	EnsemblPlantsGene:GSBRNA2T00010015001
InterPro:IPR001736	PFAM:PF00614	PFAM:PF12357	InterPro:PLipase_D/transphosphatidylase	InterPro:PLipase_D_C	InterPro:PLipase_D_fam
PFscan:PS50035	PANTHER:PTHR18896	PANTHER:PTHR18896:SF109	MetaCyc:PWY-3561	MetaCyc:PWY-7039	SMART:SM00155
SUPFAM:SSF56024	UniParc:UPI0004EDD3AB	:	:	:	:

Description

BnaA01g28530DBnaA01g28530D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G428]

Coordinates

chrLK032103:+:407014..408869

Molecular Weight (calculated)

24682.1 Da

IEP (calculated)

4.797

GRAVY (calculated)

-0.627

Length

213 amino acids

Sequence
(BLAST)

001: MYKDVTQALR AQGLEEDPRN YLTLFCLGNR EVKKEGEYEP AERPDPDTDY MRAQEARRFM IYVHSKMMIV DDEYIIVGSA NINQRSMDGA RDSEIAMGGY
101: QPHHLSHRQP ARGQVHGFRM SLWYEHLGML DETFLDPSSL ECIEKVNRIA DKYWDFYSSE SLEHDLPGHL LRYPISVDNE GNISELPGFE FFPDTKARIL
201: GNKVDYLPPI LTT

Best Arabidopsis Sequence Match ( AT1G52570.1 )
(BLAST)

001: MEECLLHGRL HATIYEVDHL HAEGGRSGFL GSILANVEET IGVGKGETQL YATIDLEKAR VGRTRKITKE PKNPKWFESF HIYCGHMAKH VIFTVKDANP
101: IGATLIGRGY IPVEDILHGE EVDRWVDILD NEKNPIAGGS KIHVKLQYFG VEKDKNWNRG IKSAKFPGVP YTFFSQRRGC KVSLYQDAHI PGNFVPKIPL
201: AGGKNYEPHR CWEDIFDAIT NAKHLIYITG WSVYTEISLV RDSRRPKQGG DVTVGELLKK KASEGVKVIL LVWDDRTSVD LLKKDGLMAT HDEETENFFR
301: GTDVNCILCP RNPDDGGSIV QNLQISTMFT HHQKIVVVDS EMPSGGSRSR RIVSFVGGLD LCDGRYDTPF HSLFRTLDTA HHDDFHQPNF TGAAITKGGP
401: REPWHDIHCR LEGPIAWDVL YNFEQRWSRQ GGKDILVKMR ELGDIIIPPS PVLFSEDHDV WNVQLFRSID GGAAAGFPDS PEAAAEAGLV SGKDNIIDRS
501: IQDAYIHAIR RAKDFIYIEN QYFLGSSFAW SADGIKPEEI NALHLIPKEL SLKIVSKIKA GEKFKVYVVV PMWPEGIPES GSVQAILDWQ KRTMEMMYKD
601: VIKALRENGL EGEDPRDYLT FFCLGNREVK KDGEYEPSEK PEPDTDYIRA QEARRFMIYV HTKMMIVDDE YIIIGSANIN QRSMDGARDS EIAMGGYQPY
701: HLSTRQPARG QIHGFRMSLW YEHLGMLDET FLDPSSQECI QKVNRVADKY WDLYSSESLE HDLPGHLLRY PIGIASEGNI TELPGCEFFP DTKARILGVK
801: SDYMPPILTT

Arabidopsis Description

PLDALPHA2Phospholipase D alpha 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SSQ9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.